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The map label for this gene is 86749660

Identifier: 86749660

GI number: 86749660

Start: 2908938

End: 2911190

Strand: Direct

Name: 86749660

Synonym: RPB_2541

Alternate gene names: NA

Gene position: 2908938-2911190 (Clockwise)

Preceding gene: 86749659

Following gene: 86749661

Centisome position: 54.56

GC content: 63.43

Gene sequence:

>2253_bases
ATGGCGGTCCGGAAATGGCGCGGGGGGCAGACCGACCCTGCCGCTAGAGCTTTGCAGCCCACCATGACGGTCGAGATCAG
GCCAGAAATCCGGATCGAAGGCTTGCGGCCTGGTTCTTCAAGTCTGCGTCCGGACGCGCGCTGGATCGGCGCAGGGGATA
CGACTGAGGTCCGTGGCGCTAAGATCCGGGCTGGTCTGTTCTACCTCGGTAGTGCTGTGGCGCTGAGGGATGGTCGCTCG
ACGGACCAATACGTCGTCAATCCCAAGCTGCCGGTGGCGGCGCCGCCAGACGTGAGCGGTTCCTCGATGCCGTATTGGCC
ATCCTACGCGGACATCCCGCCGCGGGCACGGCGAGCGTACATCGACTGGCTGGCTGGCGGACGACGCGACCCTACCTACG
GCGTAGGTTACGTTTTCCTGTTCTTCTATGGTCTTGAGCATCGACTGTTCATCGATCGGGACAGGGCATCGACGCCCGCG
GTGGTCCAGGAGGTGGAAGAGCTCCTGTCGGTCTACGGCCATAGCGGATCGCTGCGCCGTTATGCGGCCGAATTTTTGAA
CTGCGCCCGCATCGCCGCGGGCATTCCCCTGGCGCTTCCCATACCGAAGCCGGAGCATGAAAATTCCTCGGAGATGAACG
CTGCGGTTCGGCTACACCTCGGGAAAGTGCTGTCCCAGTCGAAGGCGGTCGGCTCAGAGGATGCATTGCTGTGGGTGCTG
GCACTGCCTGATGTGTATCTGAGGACGCCGGCTGTCCGATGCTTCACCGAGTTCGTCCGACTTTGGAAAGTGTGGTTCGC
GGCGAGGTACCCGAACGGCATCTCCGCCAAGCCGGCGGCCAACATTGTTATCCACTACAAGGCGGCGAGCGGCGCGTTCG
AAGTACCGATTTCCGGACCTCATGAGCAACTTCCGGACCCGATCCAGTCTCCTCGATCCGGAGCCGAACTCAAAAAGTTG
GTCGAGGAAGTCACCGCCGAACTCGAGCCGTTCAGCCGCTACGTCGGCCGCAAGCCCGACGAGCGCAACTCGATGCGCGC
GGCGTTGCTGCTACCGAAGGAGCTTCAGACCGATCCGCAGGATGGCCTGGTCGCGAAGTTCGGCCACCGGATGGCGGAGA
TCATGGGCGAGCACAAGCGCGCCAGCACGAAGATGAGCAAGATGTTGGCCATTGCCGGACTTGAGCTTCCTGTCGGCAAG
ATCACGCCTGGGATGGCGGACCAGTTGGGTGGGCTGCTGGACCAGGTCGACATCGCGATCGAGCCGGATCGTCGTTACGG
GAGCGGCGTACCGCAGCTCGACGACCAGGTGATCGTCTTCAAGGCGCCGAAAGGCGGCCCCGTCGATCACCAAAGGCCGG
CTTATCGCGCTATGAAGGCCCAGATCGAGGTTGCGGTTCTGGCAGCGGCGGTCGACGGCGAGTCATCGCACGACGAACTG
CAGCGGATCGTCGACGGCATTCGGGCTGAGAAAGACCTTGGCGGGATCGAACAGGCTCGGCTGATCGGATACGCCGTCAC
CGTCTTCAACAGCCCGCCCAAGCAGGCGCGGGTGATGCGGAAGTTGGCGGAGCACAGTCCCGCCGAGCGCGAGGCGATCG
CGAGAGCGGCCCTGACGGTGGTCGGAGGCAACGAACACGTCGGGCCAGAAGAAGTGAAATTCCTCGAGCGGCTGCACAAG
GCGTTGGGGTTGCCGAAGGAGCGGGTCTACAGCGAACTTCATCGGGCTGCGGCCACAGCGTCACCTTCGGACGAGCCGGT
GGCGCTGACCGAAGAGAAACGGGTTGCCGGCATTCCCATTCCGCCCCAGGCGGAAGTGTCTTCGATCCCCGAGCCTCCGG
CGCCGATCGCCGCCGAAACGTCTGGGGGTATCCAGATCGACGCGGAGAAGTTGGCCAGGACGCAGCGAGAAACGCAGGCG
GTGGCCAAACTGCTCGCCGACATCTTCACCGACGAAGCCCCAGAGGCAGAGCCTGTGTCACAGGCCTCTGCGACTGGGCG
GTCGGCTTTCGAAGGGCTGGATACCGCCCATGCCGAGCTCGTCGAGATGCTAGAGATCAAGGGGACGGTGCCGCGCGCCG
AGTTCGACCAGCGCGCGAAAGAGATGAAGCTTCTGCCCGAGGGGGCCATCGAGCGCATCAACGAGTGGTCCTTCGACCTG
TTCGATGAAGCGCTGATCGAGGTTGGCCATGACGTTACGATAGCGCCGGACCTGCGCGAGCGGTTGGCCGAATTGAGAGA
GAATGCGGAATGA

Upstream 100 bases:

>100_bases
GGTGATCTGGGCGATCAGCGCCGCCTACGAATTCGTCACAACGCATGCTTCTGCCGTCGTGGGTTTTGCAGCGATCGCCG
GCGGCGTTCTGGTGATTGCT

Downstream 100 bases:

>100_bases
CGAGCACCACGAAGAAGATCAAGCCCAAGGAGCGGGACACGATCATTCAGGCGCTATCCGCCGGTGTCGTGCCGAGGCTC
GGGTTGCCGTACATCCAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 750; Mature: 749

Protein sequence:

>750_residues
MAVRKWRGGQTDPAARALQPTMTVEIRPEIRIEGLRPGSSSLRPDARWIGAGDTTEVRGAKIRAGLFYLGSAVALRDGRS
TDQYVVNPKLPVAAPPDVSGSSMPYWPSYADIPPRARRAYIDWLAGGRRDPTYGVGYVFLFFYGLEHRLFIDRDRASTPA
VVQEVEELLSVYGHSGSLRRYAAEFLNCARIAAGIPLALPIPKPEHENSSEMNAAVRLHLGKVLSQSKAVGSEDALLWVL
ALPDVYLRTPAVRCFTEFVRLWKVWFAARYPNGISAKPAANIVIHYKAASGAFEVPISGPHEQLPDPIQSPRSGAELKKL
VEEVTAELEPFSRYVGRKPDERNSMRAALLLPKELQTDPQDGLVAKFGHRMAEIMGEHKRASTKMSKMLAIAGLELPVGK
ITPGMADQLGGLLDQVDIAIEPDRRYGSGVPQLDDQVIVFKAPKGGPVDHQRPAYRAMKAQIEVAVLAAAVDGESSHDEL
QRIVDGIRAEKDLGGIEQARLIGYAVTVFNSPPKQARVMRKLAEHSPAEREAIARAALTVVGGNEHVGPEEVKFLERLHK
ALGLPKERVYSELHRAAATASPSDEPVALTEEKRVAGIPIPPQAEVSSIPEPPAPIAAETSGGIQIDAEKLARTQRETQA
VAKLLADIFTDEAPEAEPVSQASATGRSAFEGLDTAHAELVEMLEIKGTVPRAEFDQRAKEMKLLPEGAIERINEWSFDL
FDEALIEVGHDVTIAPDLRERLAELRENAE

Sequences:

>Translated_750_residues
MAVRKWRGGQTDPAARALQPTMTVEIRPEIRIEGLRPGSSSLRPDARWIGAGDTTEVRGAKIRAGLFYLGSAVALRDGRS
TDQYVVNPKLPVAAPPDVSGSSMPYWPSYADIPPRARRAYIDWLAGGRRDPTYGVGYVFLFFYGLEHRLFIDRDRASTPA
VVQEVEELLSVYGHSGSLRRYAAEFLNCARIAAGIPLALPIPKPEHENSSEMNAAVRLHLGKVLSQSKAVGSEDALLWVL
ALPDVYLRTPAVRCFTEFVRLWKVWFAARYPNGISAKPAANIVIHYKAASGAFEVPISGPHEQLPDPIQSPRSGAELKKL
VEEVTAELEPFSRYVGRKPDERNSMRAALLLPKELQTDPQDGLVAKFGHRMAEIMGEHKRASTKMSKMLAIAGLELPVGK
ITPGMADQLGGLLDQVDIAIEPDRRYGSGVPQLDDQVIVFKAPKGGPVDHQRPAYRAMKAQIEVAVLAAAVDGESSHDEL
QRIVDGIRAEKDLGGIEQARLIGYAVTVFNSPPKQARVMRKLAEHSPAEREAIARAALTVVGGNEHVGPEEVKFLERLHK
ALGLPKERVYSELHRAAATASPSDEPVALTEEKRVAGIPIPPQAEVSSIPEPPAPIAAETSGGIQIDAEKLARTQRETQA
VAKLLADIFTDEAPEAEPVSQASATGRSAFEGLDTAHAELVEMLEIKGTVPRAEFDQRAKEMKLLPEGAIERINEWSFDL
FDEALIEVGHDVTIAPDLRERLAELRENAE
>Mature_749_residues
AVRKWRGGQTDPAARALQPTMTVEIRPEIRIEGLRPGSSSLRPDARWIGAGDTTEVRGAKIRAGLFYLGSAVALRDGRST
DQYVVNPKLPVAAPPDVSGSSMPYWPSYADIPPRARRAYIDWLAGGRRDPTYGVGYVFLFFYGLEHRLFIDRDRASTPAV
VQEVEELLSVYGHSGSLRRYAAEFLNCARIAAGIPLALPIPKPEHENSSEMNAAVRLHLGKVLSQSKAVGSEDALLWVLA
LPDVYLRTPAVRCFTEFVRLWKVWFAARYPNGISAKPAANIVIHYKAASGAFEVPISGPHEQLPDPIQSPRSGAELKKLV
EEVTAELEPFSRYVGRKPDERNSMRAALLLPKELQTDPQDGLVAKFGHRMAEIMGEHKRASTKMSKMLAIAGLELPVGKI
TPGMADQLGGLLDQVDIAIEPDRRYGSGVPQLDDQVIVFKAPKGGPVDHQRPAYRAMKAQIEVAVLAAAVDGESSHDELQ
RIVDGIRAEKDLGGIEQARLIGYAVTVFNSPPKQARVMRKLAEHSPAEREAIARAALTVVGGNEHVGPEEVKFLERLHKA
LGLPKERVYSELHRAAATASPSDEPVALTEEKRVAGIPIPPQAEVSSIPEPPAPIAAETSGGIQIDAEKLARTQRETQAV
AKLLADIFTDEAPEAEPVSQASATGRSAFEGLDTAHAELVEMLEIKGTVPRAEFDQRAKEMKLLPEGAIERINEWSFDLF
DEALIEVGHDVTIAPDLRERLAELRENAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81937; Mature: 81806

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRKWRGGQTDPAARALQPTMTVEIRPEIRIEGLRPGSSSLRPDARWIGAGDTTEVRGA
CCCCCCCCCCCCHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCC
KIRAGLFYLGSAVALRDGRSTDQYVVNPKLPVAAPPDVSGSSMPYWPSYADIPPRARRAY
CHHHHHHHHCCCCEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
IDWLAGGRRDPTYGVGYVFLFFYGLEHRLFIDRDRASTPAVVQEVEELLSVYGHSGSLRR
HHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHH
YAAEFLNCARIAAGIPLALPIPKPEHENSSEMNAAVRLHLGKVLSQSKAVGSEDALLWVL
HHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
ALPDVYLRTPAVRCFTEFVRLWKVWFAARYPNGISAKPAANIVIHYKAASGAFEVPISGP
ECCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEECCCCCC
HEQLPDPIQSPRSGAELKKLVEEVTAELEPFSRYVGRKPDERNSMRAALLLPKELQTDPQ
HHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHCCCCC
DGLVAKFGHRMAEIMGEHKRASTKMSKMLAIAGLELPVGKITPGMADQLGGLLDQVDIAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEE
EPDRRYGSGVPQLDDQVIVFKAPKGGPVDHQRPAYRAMKAQIEVAVLAAAVDGESSHDEL
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCHHHH
QRIVDGIRAEKDLGGIEQARLIGYAVTVFNSPPKQARVMRKLAEHSPAEREAIARAALTV
HHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHEE
VGGNEHVGPEEVKFLERLHKALGLPKERVYSELHRAAATASPSDEPVALTEEKRVAGIPI
ECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
PPQAEVSSIPEPPAPIAAETSGGIQIDAEKLARTQRETQAVAKLLADIFTDEAPEAEPVS
CCCCHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
QASATGRSAFEGLDTAHAELVEMLEIKGTVPRAEFDQRAKEMKLLPEGAIERINEWSFDL
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHH
FDEALIEVGHDVTIAPDLRERLAELRENAE
HHHHHHHCCCCEEECHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVRKWRGGQTDPAARALQPTMTVEIRPEIRIEGLRPGSSSLRPDARWIGAGDTTEVRGA
CCCCCCCCCCCHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCC
KIRAGLFYLGSAVALRDGRSTDQYVVNPKLPVAAPPDVSGSSMPYWPSYADIPPRARRAY
CHHHHHHHHCCCCEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
IDWLAGGRRDPTYGVGYVFLFFYGLEHRLFIDRDRASTPAVVQEVEELLSVYGHSGSLRR
HHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHH
YAAEFLNCARIAAGIPLALPIPKPEHENSSEMNAAVRLHLGKVLSQSKAVGSEDALLWVL
HHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
ALPDVYLRTPAVRCFTEFVRLWKVWFAARYPNGISAKPAANIVIHYKAASGAFEVPISGP
ECCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEECCCCCC
HEQLPDPIQSPRSGAELKKLVEEVTAELEPFSRYVGRKPDERNSMRAALLLPKELQTDPQ
HHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHCCCCC
DGLVAKFGHRMAEIMGEHKRASTKMSKMLAIAGLELPVGKITPGMADQLGGLLDQVDIAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEE
EPDRRYGSGVPQLDDQVIVFKAPKGGPVDHQRPAYRAMKAQIEVAVLAAAVDGESSHDEL
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCHHHH
QRIVDGIRAEKDLGGIEQARLIGYAVTVFNSPPKQARVMRKLAEHSPAEREAIARAALTV
HHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHEE
VGGNEHVGPEEVKFLERLHKALGLPKERVYSELHRAAATASPSDEPVALTEEKRVAGIPI
ECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
PPQAEVSSIPEPPAPIAAETSGGIQIDAEKLARTQRETQAVAKLLADIFTDEAPEAEPVS
CCCCHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
QASATGRSAFEGLDTAHAELVEMLEIKGTVPRAEFDQRAKEMKLLPEGAIERINEWSFDL
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHH
FDEALIEVGHDVTIAPDLRERLAELRENAE
HHHHHHHCCCCEEECHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA