Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749648
Identifier: 86749648
GI number: 86749648
Start: 2885939
End: 2886235
Strand: Direct
Name: 86749648
Synonym: RPB_2528
Alternate gene names: NA
Gene position: 2885939-2886235 (Clockwise)
Preceding gene: 86749647
Following gene: 86749659
Centisome position: 54.13
GC content: 71.04
Gene sequence:
>297_bases GTGAGCGCAACATCCGGCTATCTCGCGCTGGTCTACAAGGACCGCGACACCTCCTACGGCGTCGCCTTTCCCGACGTGCC CGGCTGCATCTCGGCAGGCGACACGTTCGAGCAGGCGATCGACAACGCCGCCGAAGCACTCGGCGGCCACCTCGCGCTGC TACGCGCCGATGGCGACCCGATCCCGCAGCCGCGCAGCCTCGAGCAATTGCGCGACGATCCGGAGTTCGTCGCGGAGGCC GCCGACGCCGTGGTGGCGTTCGTCAGGCCGCAGGCGGAGCGGGCGGCGGCGGAGTAG
Upstream 100 bases:
>100_bases CGGTGAAAGCTGGTAAGGTGACGGTCCCGCATCCGAAGAAAGACCTGCATCCGAAGATCGTTCGTTCGGTCACGCGGCAG GCAGGCCTGAAGGAGGTCCG
Downstream 100 bases:
>100_bases GCGTGGTGATGTGTGTAGGGCGCAATAGCGAAGCGTATTGCGCCGCCGTGCGGTGAGCGGCGGATTACGCTGCGCTAATC CGGCCTACGGGCTGCGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSATSGYLALVYKDRDTSYGVAFPDVPGCISAGDTFEQAIDNAAEALGGHLALLRADGDPIPQPRSLEQLRDDPEFVAEA ADAVVAFVRPQAERAAAE
Sequences:
>Translated_98_residues MSATSGYLALVYKDRDTSYGVAFPDVPGCISAGDTFEQAIDNAAEALGGHLALLRADGDPIPQPRSLEQLRDDPEFVAEA ADAVVAFVRPQAERAAAE >Mature_97_residues SATSGYLALVYKDRDTSYGVAFPDVPGCISAGDTFEQAIDNAAEALGGHLALLRADGDPIPQPRSLEQLRDDPEFVAEAA DAVVAFVRPQAERAAAE
Specific function: Unknown
COG id: COG1598
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10321; Mature: 10190
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATSGYLALVYKDRDTSYGVAFPDVPGCISAGDTFEQAIDNAAEALGGHLALLRADGDP CCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCC IPQPRSLEQLRDDPEFVAEAADAVVAFVRPQAERAAAE CCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCCC >Mature Secondary Structure SATSGYLALVYKDRDTSYGVAFPDVPGCISAGDTFEQAIDNAAEALGGHLALLRADGDP CCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCC IPQPRSLEQLRDDPEFVAEAADAVVAFVRPQAERAAAE CCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA