Click here to switch to the map view.

The map label for this gene is ctb [H]

Identifier: 86749638

GI number: 86749638

Start: 2877148

End: 2877534

Strand: Direct

Name: ctb [H]

Synonym: RPB_2518

Alternate gene names: 86749638

Gene position: 2877148-2877534 (Clockwise)

Preceding gene: 86749637

Following gene: 86749642

Centisome position: 53.96

GC content: 67.7

Gene sequence:

>387_bases
ATGCACAATGTCACCGAGGCCGAAATCGCGCAGCTCGTGCGCACCTTCTATGCGCGCGCCCGCGAGGACGACCTGATCGG
TCCGATCTTCGACCGCGCGGTCGCCGACTGGGACCATCACATCGCGCAGATCAGCGATTTCTGGTCGTCGATGCTGCTGA
AGACCGGGCGCTACGGTGGCCGGCCGATGCGGCCGCATCTGGTGCTGGGCCTGGAGCCCGCGCATTTCGACCGCTGGCTG
GCGCTGTTCGAGGCCACGGCGAACGAATTGCTCGCACCGGAGGTCGCGGCGCAGTTCATCATCCGCGCCCGCCGCATCGC
CGACAGTTTCGAGATGGGCATCGCGACCACGCAGGGCAAGGTCACGGTGCCGCGGCACGGCGCGTAG

Upstream 100 bases:

>100_bases
GCCGACGATCTCGCCTGGTGGGCGGAGGCGGCGAAGACCCAGCGCCAGAAGATGAAGCCGCCATATTGATCGCAGCCGCG
GCGCGGCCTACATCGGTCAA

Downstream 100 bases:

>100_bases
TGCGAGATTTGCCCGATCGTCATTCCGGGGCGCGCGCAGCGCGAACCCGGAATCCATACTCCCCGGACTAGGCGTTGTTA
CCTCGGCCGTGCCACAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Cj-trHbP; Truncated Hb [H]

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MHNVTEAEIAQLVRTFYARAREDDLIGPIFDRAVADWDHHIAQISDFWSSMLLKTGRYGGRPMRPHLVLGLEPAHFDRWL
ALFEATANELLAPEVAAQFIIRARRIADSFEMGIATTQGKVTVPRHGA

Sequences:

>Translated_128_residues
MHNVTEAEIAQLVRTFYARAREDDLIGPIFDRAVADWDHHIAQISDFWSSMLLKTGRYGGRPMRPHLVLGLEPAHFDRWL
ALFEATANELLAPEVAAQFIIRARRIADSFEMGIATTQGKVTVPRHGA
>Mature_128_residues
MHNVTEAEIAQLVRTFYARAREDDLIGPIFDRAVADWDHHIAQISDFWSSMLLKTGRYGGRPMRPHLVLGLEPAHFDRWL
ALFEATANELLAPEVAAQFIIRARRIADSFEMGIATTQGKVTVPRHGA

Specific function: Has been suggested to be involved in cytochrome c peroxidase or P450-like oxygen chemistry or cyanide detoxification. The high oxygen affinity of this protein suggests that it probably does not function as an oxygen transporter [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group III subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 14438; Mature: 14438

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNVTEAEIAQLVRTFYARAREDDLIGPIFDRAVADWDHHIAQISDFWSSMLLKTGRYGG
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RPMRPHLVLGLEPAHFDRWLALFEATANELLAPEVAAQFIIRARRIADSFEMGIATTQGK
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCE
VTVPRHGA
EECCCCCC
>Mature Secondary Structure
MHNVTEAEIAQLVRTFYARAREDDLIGPIFDRAVADWDHHIAQISDFWSSMLLKTGRYGG
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RPMRPHLVLGLEPAHFDRWLALFEATANELLAPEVAAQFIIRARRIADSFEMGIATTQGK
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCE
VTVPRHGA
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]