Definition | Rhodopseudomonas palustris HaA2, complete genome. |
---|---|
Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is adh [H]
Identifier: 86749594
GI number: 86749594
Start: 2830363
End: 2831421
Strand: Reverse
Name: adh [H]
Synonym: RPB_2474
Alternate gene names: 86749594
Gene position: 2831421-2830363 (Counterclockwise)
Preceding gene: 86749595
Following gene: 86749593
Centisome position: 53.11
GC content: 64.12
Gene sequence:
>1059_bases ATGACGCAGATGCGTCGCCAATCGCTGGTGAAATTCGACGCCCCGCTGTGCGAGACCATTATCGACACGCCGAAGCCGCA AGGCCGCGAAGTGCTGGTCCGGATCGAACGCTGCGGGTTGTGTCATTCCGATCTCCACATCCAGGACGGCTACGCCGATC TCGGCGGCGGCAAGAAGCTCGACACCACGCGCGGCATGACGCTGCCCTTCACGCTCGGCCACGAGATCGCCGGCATCGTC GACGAGGTCGGCCCCGATGCACCGGCCGAACTGATCGGCAAGAAGAAGGCGGTGTTTCCCTGGATCGGCTGCGGCAAGTG CCGCGATTGCCTCGCCGGTGACGAGAACCTGTGCACCAAGAACCGCTTCCTCGGCGTCGCGATCGACGGCGGCTTCGCCA CGCACGTGCTGGTACCCGACGCGAAATATCTGCTCGACTACGATCCGCTGCCGACCAATGTCGCGGCGACGCTGATGTGC TCCGGTATCACCGCCTACGGCGCGCTGAAGCGGCTGGTCGATCAGCCGCGCCAGCGCAACATCCTGCTGATCGGTCTCGG TGGCGTCGGCATGATGGGCCTGTCGCTGGCGCAGACGATGTTCAAGCAGCCGATCTCGGTCGCCGATCTCAGCCCTGCAG CGCGCGAAGCCGCTCTGCAGAACGGCGCCACGACCGCCTACGATCCGTCCGAGCCCGACGTGATCAAGCGCATCGTCAAG GAGAACGACGGCGGTTTCGACTGCATCGTGGATTTCGCCGGCAACGACAAGTCGATGAACTTCGCCGTCGGCACTGTCGC GCGCGGCGGCAAGATCGTCGTCTCCGGGCTGATGGGCGGTCAGTTCAGCCTGCCGATGGTGCAGTGGATCTACAAGCGCA TGACGATCGAAGGCTTCATGGTCGGGACCCTCGAGGAGACCAAGGAACTGCTGGCGCTGGCGCGCGCCGGCAAGATCAAG CCGACGCCGATGAAAGAAGAACCGATGACGGACGTGCAGAAGTGGATCGATCAGTTGCGCGCCGGCAAGGTGGTCGGCCG CATCATGCTGACGAACTAA
Upstream 100 bases:
>100_bases CGCCGCGCCGAGACCGTCCCGGTTTCCGGCTTTGTTGCCATGGCGAACGAATTGATCGATATACGAGATACAAAAAACAC ACCCTAAGGGAGAGACCGAC
Downstream 100 bases:
>100_bases TCGCGCTTCCGACGCGCCCACGGAACTGCGTTGCGGGTTCCCGTTTCACCCGCAATGCAGGCCCGATTCTTGTCCCAACC GCACCGGAATTGCGGCTTAT
Product: zinc-binding alcohol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTQMRRQSLVKFDAPLCETIIDTPKPQGREVLVRIERCGLCHSDLHIQDGYADLGGGKKLDTTRGMTLPFTLGHEIAGIV DEVGPDAPAELIGKKKAVFPWIGCGKCRDCLAGDENLCTKNRFLGVAIDGGFATHVLVPDAKYLLDYDPLPTNVAATLMC SGITAYGALKRLVDQPRQRNILLIGLGGVGMMGLSLAQTMFKQPISVADLSPAAREAALQNGATTAYDPSEPDVIKRIVK ENDGGFDCIVDFAGNDKSMNFAVGTVARGGKIVVSGLMGGQFSLPMVQWIYKRMTIEGFMVGTLEETKELLALARAGKIK PTPMKEEPMTDVQKWIDQLRAGKVVGRIMLTN
Sequences:
>Translated_352_residues MTQMRRQSLVKFDAPLCETIIDTPKPQGREVLVRIERCGLCHSDLHIQDGYADLGGGKKLDTTRGMTLPFTLGHEIAGIV DEVGPDAPAELIGKKKAVFPWIGCGKCRDCLAGDENLCTKNRFLGVAIDGGFATHVLVPDAKYLLDYDPLPTNVAATLMC SGITAYGALKRLVDQPRQRNILLIGLGGVGMMGLSLAQTMFKQPISVADLSPAAREAALQNGATTAYDPSEPDVIKRIVK ENDGGFDCIVDFAGNDKSMNFAVGTVARGGKIVVSGLMGGQFSLPMVQWIYKRMTIEGFMVGTLEETKELLALARAGKIK PTPMKEEPMTDVQKWIDQLRAGKVVGRIMLTN >Mature_351_residues TQMRRQSLVKFDAPLCETIIDTPKPQGREVLVRIERCGLCHSDLHIQDGYADLGGGKKLDTTRGMTLPFTLGHEIAGIVD EVGPDAPAELIGKKKAVFPWIGCGKCRDCLAGDENLCTKNRFLGVAIDGGFATHVLVPDAKYLLDYDPLPTNVAATLMCS GITAYGALKRLVDQPRQRNILLIGLGGVGMMGLSLAQTMFKQPISVADLSPAAREAALQNGATTAYDPSEPDVIKRIVKE NDGGFDCIVDFAGNDKSMNFAVGTVARGGKIVVSGLMGGQFSLPMVQWIYKRMTIEGFMVGTLEETKELLALARAGKIKP TPMKEEPMTDVQKWIDQLRAGKVVGRIMLTN
Specific function: Preferred Specificity Is Towards 1-Propanol. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI18379349, Length=349, Percent_Identity=26.0744985673352, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI71565154, Length=298, Percent_Identity=28.1879194630872, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI4501929, Length=285, Percent_Identity=23.5087719298246, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI34577061, Length=265, Percent_Identity=25.2830188679245, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI4501933, Length=285, Percent_Identity=24.2105263157895, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI87081918, Length=323, Percent_Identity=32.1981424148607, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI226510992, Length=299, Percent_Identity=29.0969899665552, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1790718, Length=358, Percent_Identity=27.3743016759777, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1790045, Length=353, Percent_Identity=23.7960339943343, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1788073, Length=279, Percent_Identity=27.2401433691756, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787863, Length=264, Percent_Identity=26.8939393939394, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI87082401, Length=335, Percent_Identity=26.2686567164179, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1788407, Length=290, Percent_Identity=24.4827586206897, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1786518, Length=313, Percent_Identity=28.7539936102236, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI87082125, Length=263, Percent_Identity=27.7566539923954, Blast_Score=75, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17562584, Length=344, Percent_Identity=29.0697674418605, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17562582, Length=348, Percent_Identity=29.0229885057471, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71988145, Length=341, Percent_Identity=24.9266862170088, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562876, Length=293, Percent_Identity=26.6211604095563, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562878, Length=190, Percent_Identity=29.4736842105263, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI25146526, Length=283, Percent_Identity=25.7950530035336, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71997431, Length=285, Percent_Identity=25.2631578947368, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319621, Length=356, Percent_Identity=26.123595505618, Blast_Score=109, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6323961, Length=336, Percent_Identity=25.5952380952381, Blast_Score=106, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6324486, Length=336, Percent_Identity=25, Blast_Score=101, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6320033, Length=382, Percent_Identity=24.0837696335079, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6323729, Length=337, Percent_Identity=24.6290801186944, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6319258, Length=270, Percent_Identity=26.2962962962963, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6323980, Length=317, Percent_Identity=27.1293375394322, Blast_Score=80, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6319257, Length=338, Percent_Identity=26.9230769230769, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6319949, Length=365, Percent_Identity=25.7534246575342, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6319955, Length=336, Percent_Identity=23.8095238095238, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322619, Length=336, Percent_Identity=23.8095238095238, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI28573965, Length=312, Percent_Identity=23.3974358974359, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24586287, Length=312, Percent_Identity=23.3974358974359, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24586285, Length=312, Percent_Identity=23.3974358974359, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI17737895, Length=295, Percent_Identity=26.4406779661017, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI17137530, Length=300, Percent_Identity=26, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI17737897, Length=305, Percent_Identity=25.5737704918033, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 38055; Mature: 37924
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQMRRQSLVKFDAPLCETIIDTPKPQGREVLVRIERCGLCHSDLHIQDGYADLGGGKKL CCCHHHHHHHHCCCHHHHHHHCCCCCCCHHEEEEEHHCCCCCCCCEEECCCCCCCCCCEE DTTRGMTLPFTLGHEIAGIVDEVGPDAPAELIGKKKAVFPWIGCGKCRDCLAGDENLCTK CCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCC NRFLGVAIDGGFATHVLVPDAKYLLDYDPLPTNVAATLMCSGITAYGALKRLVDQPRQRN CCEEEEEEECCEEEEEECCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ILLIGLGGVGMMGLSLAQTMFKQPISVADLSPAAREAALQNGATTAYDPSEPDVIKRIVK EEEEECCCHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ENDGGFDCIVDFAGNDKSMNFAVGTVARGGKIVVSGLMGGQFSLPMVQWIYKRMTIEGFM CCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHEE VGTLEETKELLALARAGKIKPTPMKEEPMTDVQKWIDQLRAGKVVGRIMLTN EECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHEEEEEECC >Mature Secondary Structure TQMRRQSLVKFDAPLCETIIDTPKPQGREVLVRIERCGLCHSDLHIQDGYADLGGGKKL CCHHHHHHHHCCCHHHHHHHCCCCCCCHHEEEEEHHCCCCCCCCEEECCCCCCCCCCEE DTTRGMTLPFTLGHEIAGIVDEVGPDAPAELIGKKKAVFPWIGCGKCRDCLAGDENLCTK CCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCC NRFLGVAIDGGFATHVLVPDAKYLLDYDPLPTNVAATLMCSGITAYGALKRLVDQPRQRN CCEEEEEEECCEEEEEECCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ILLIGLGGVGMMGLSLAQTMFKQPISVADLSPAAREAALQNGATTAYDPSEPDVIKRIVK EEEEECCCHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ENDGGFDCIVDFAGNDKSMNFAVGTVARGGKIVVSGLMGGQFSLPMVQWIYKRMTIEGFM CCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHEE VGTLEETKELLALARAGKIKPTPMKEEPMTDVQKWIDQLRAGKVVGRIMLTN EECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572479 [H]