Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749564
Identifier: 86749564
GI number: 86749564
Start: 2800432
End: 2801016
Strand: Direct
Name: 86749564
Synonym: RPB_2444
Alternate gene names: NA
Gene position: 2800432-2801016 (Clockwise)
Preceding gene: 86749562
Following gene: 86749565
Centisome position: 52.52
GC content: 65.47
Gene sequence:
>585_bases ATGGGACTTGCGGTGATGATCCTCGGCCTGGTGCTGTTCATCGGCACCCACGTCGTGACGACGCAGCGCGATCTGCGGGG CCGCCTGATCGGGATCGGCGGCGAAGCAGTCTACAAGATCGGTTACGCCGTTCTGGCGATCCTCGGCATCGTCCTGATCT CCTACGGCTTCGGTGCCTACCGTGAGGATGGATTGATCGATCTGTGGTTTCCGCCGGTCTGGACCAAGCACCTCACCGCG CTGCTGATGCTGCCGATGGCTATCCTGCTGGCCGCGGCCTATTCGCGCGGCCGCATCTATGCGGCGGTGAAGCACCCGAT GATCACCGCGGTGAAGCTGTGGGCGGTCGGCCATCTGATCGCCAACGGCGATCTCGGCTCGATCATCCTGTTCGGTTCGT TGCTGGCCTGGGCGGTGTACGACCGCATCTCGCTGAAGCGGCGCGCCGACCCGGGCGGCCCGCGGATTCCGGTCGGCGGC CCGAAAAACGACGCCATCGCGATCGGCGCCGGCGTGGTGCTGTATCTGGCGCTGGCGTTCGCCTTCCATCCCTACGTCGT CGGCGTTCCCGTCTTCGGAGCCTAA
Upstream 100 bases:
>100_bases CGATTGGCCGATCTGCCGTGCCTCACGCAGCGGCGCGGACCATAGTGGGATTTGGCCGGCGCGGAAACCGACGCGTGCCG ACGGGGACAGGAGTGGCGCG
Downstream 100 bases:
>100_bases GCATGTCCGTCCAAACGACCATCAAGCGGAAGACCGCTCCGGACATCCGCGCGCGCAAGGGCGGCGATCCGATCGTGATG CTGACCTCGTATCACGCCCA
Product: NnrU
Products: NA
Alternate protein names: NnrUfamily Protein; NnrU Protein; Transmembrane Protein; NnrU-Like Protein; Nitrate Reductase Protein; NnrU Family Membrane Protein
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MGLAVMILGLVLFIGTHVVTTQRDLRGRLIGIGGEAVYKIGYAVLAILGIVLISYGFGAYREDGLIDLWFPPVWTKHLTA LLMLPMAILLAAAYSRGRIYAAVKHPMITAVKLWAVGHLIANGDLGSIILFGSLLAWAVYDRISLKRRADPGGPRIPVGG PKNDAIAIGAGVVLYLALAFAFHPYVVGVPVFGA
Sequences:
>Translated_194_residues MGLAVMILGLVLFIGTHVVTTQRDLRGRLIGIGGEAVYKIGYAVLAILGIVLISYGFGAYREDGLIDLWFPPVWTKHLTA LLMLPMAILLAAAYSRGRIYAAVKHPMITAVKLWAVGHLIANGDLGSIILFGSLLAWAVYDRISLKRRADPGGPRIPVGG PKNDAIAIGAGVVLYLALAFAFHPYVVGVPVFGA >Mature_193_residues GLAVMILGLVLFIGTHVVTTQRDLRGRLIGIGGEAVYKIGYAVLAILGIVLISYGFGAYREDGLIDLWFPPVWTKHLTAL LMLPMAILLAAAYSRGRIYAAVKHPMITAVKLWAVGHLIANGDLGSIILFGSLLAWAVYDRISLKRRADPGGPRIPVGGP KNDAIAIGAGVVLYLALAFAFHPYVVGVPVFGA
Specific function: Unknown
COG id: COG4094
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20660; Mature: 20529
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLAVMILGLVLFIGTHVVTTQRDLRGRLIGIGGEAVYKIGYAVLAILGIVLISYGFGAY CCHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCC REDGLIDLWFPPVWTKHLTALLMLPMAILLAAAYSRGRIYAAVKHPMITAVKLWAVGHLI CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH ANGDLGSIILFGSLLAWAVYDRISLKRRADPGGPRIPVGGPKNDAIAIGAGVVLYLALAF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHH AFHPYVVGVPVFGA HHCCHHEEECCCCC >Mature Secondary Structure GLAVMILGLVLFIGTHVVTTQRDLRGRLIGIGGEAVYKIGYAVLAILGIVLISYGFGAY CHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCC REDGLIDLWFPPVWTKHLTALLMLPMAILLAAAYSRGRIYAAVKHPMITAVKLWAVGHLI CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH ANGDLGSIILFGSLLAWAVYDRISLKRRADPGGPRIPVGGPKNDAIAIGAGVVLYLALAF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHH AFHPYVVGVPVFGA HHCCHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA