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The map label for this gene is 86749562

Identifier: 86749562

GI number: 86749562

Start: 2798954

End: 2799220

Strand: Direct

Name: 86749562

Synonym: RPB_2442

Alternate gene names: NA

Gene position: 2798954-2799220 (Clockwise)

Preceding gene: 86749561

Following gene: 86749564

Centisome position: 52.5

GC content: 67.04

Gene sequence:

>267_bases
ATGCTGCAGGGACATTTCAACATCGAGACTGCGCTGCCGATCGAAGCCGGCGAGAGCCCGGACGTGCTGTTCGATCTCGG
CCTGTTGTTCGCGTCGGGGCGCGGCGCGCCGGTCGATCTGATCGCGGCGCACAAATGGTTCAACCTTGCCGCTCTGAGAG
GCCGCGCCGACGCGATCGAACTGCGTCGCGAAGTCGCCGAGCAGATGTCGGCCGACGAGATCGCCGCGGCGCAGCGCGAA
GCGCGGGCCTGGATCACCTCGCACTGA

Upstream 100 bases:

>100_bases
CATGATCACCCCATAACGCGCCGGGACACGGCGGTGGGGACGACAAGATCAGAGGACAGGAGCCGCGCTCGGTTCGGGCC
CGGCCAGGATGGAGAGACAG

Downstream 100 bases:

>100_bases
TTGCGGGGAGGGCAGAGACCGCCCGAGGACCCTCCGCAGTCGCGCCGTTCATTCGATCCTGATGCCGGCGGCACGGATCA
CATCAGCCCACAGCAACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Sel1 Domain Protein Repeat-Containing Protein; Sel1 Domain-Containing Protein Repeat-Containing Protein; Sel1 Repeat-Containing Protein; Sel1-Like TPR Repeat Protein

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MLQGHFNIETALPIEAGESPDVLFDLGLLFASGRGAPVDLIAAHKWFNLAALRGRADAIELRREVAEQMSADEIAAAQRE
ARAWITSH

Sequences:

>Translated_88_residues
MLQGHFNIETALPIEAGESPDVLFDLGLLFASGRGAPVDLIAAHKWFNLAALRGRADAIELRREVAEQMSADEIAAAQRE
ARAWITSH
>Mature_88_residues
MLQGHFNIETALPIEAGESPDVLFDLGLLFASGRGAPVDLIAAHKWFNLAALRGRADAIELRREVAEQMSADEIAAAQRE
ARAWITSH

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9596; Mature: 9596

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQGHFNIETALPIEAGESPDVLFDLGLLFASGRGAPVDLIAAHKWFNLAALRGRADAIE
CCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCHHHHH
LRREVAEQMSADEIAAAQREARAWITSH
HHHHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLQGHFNIETALPIEAGESPDVLFDLGLLFASGRGAPVDLIAAHKWFNLAALRGRADAIE
CCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCHHHHH
LRREVAEQMSADEIAAAQREARAWITSH
HHHHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA