Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749552
Identifier: 86749552
GI number: 86749552
Start: 2789711
End: 2790658
Strand: Reverse
Name: 86749552
Synonym: RPB_2432
Alternate gene names: NA
Gene position: 2790658-2789711 (Counterclockwise)
Preceding gene: 86749556
Following gene: 86749549
Centisome position: 52.34
GC content: 64.35
Gene sequence:
>948_bases ATGCTGAAAATGCTGACGCTCGGCGTCTCGGTCGCGTTGATGGGCTCGATCGGGATCGCTCAGGCCCAGGCCCCCGCACC GGACTGGACCAAGTCGAAATGGGGGCCGAACGACGAGATCGGCGCCGCCAACTATCTGACGCCCGAGCTGGCGCTGAAAG CCGCGCAACTGGTGAAGACCGGCAAGGTCTACGCGCTCGGCATCCCGGTCGATACCAAGACCCCGGCCTATCCGCCGCGC GCCTTCAAGATCACCGTGGTGCAACCCGGCCAGGCCGGCAGCCCCGGCATGGGCCCGAGCAAGACGACCTACAATGACGA CATCATCGAAGGCTGGGTCGGCGTCGGCAGCCAGCTCGACGGGCTCGGCCATATTGGCGTCGAGCACGTCTACTACAACG GCAACAAGATCGCCGATTTCGGCGATGCGACCGGCCTGAAGAAGCTCGGCATCGACAAGGTGCCGCCGATGGTGACGCGC GGCGTGCTGCTCGACATGGCGGCGCATTTCGGCACCGACGTCGTCAAGGAAGGCACCGCCTTCAACGTCAAGGAGATCGA GGACGTCGCCAAGAAGCAGGGCGTCGAAATCCGTCAGGGCGACGTCGTGCTGTTCCACACCGGCTGGATCAGCCTGATCG GCAAGGACGACAAGCGCTACAACACCGGCGAACCCGGCGTCGGCGTCGAGGGCGCGAAGTATCTGACCTCCAAGGGTGTG GTCGCGGTCGGCGCCGACACCTGGGGCGTCGAGGTGGTGCCGTTCGAGAGCAAGAACATCTTCGAGGTCCACCAGATCCT GCTGCCGATGAACGGTACCTACATCCTGGAAAACATGAACACCGCCGACCTCGCCCGCGACAAGGTCTACGAGTTCATGT TCGTGCTCGGCCAGCCGCGGTTCAAGGGCGCGGTGCAGAGCATGATCAACCCGGTCGCGATCCGCTGA
Upstream 100 bases:
>100_bases AAGCAGCTTTCCGGCGGAAGATCGCACGCGGCCCGCAACCGGCAACGGCGTTGCGGGCCGACGACAAACGTCAAGAAACA ACAATCGGGAGAAAACCACC
Downstream 100 bases:
>100_bases TCCGCGGTTCTCACGATGCCGACTGATCGGCGGACGGCTGTCTCCCGTCAGCGGGCGATGGTGATCCGCCGATCACGGCG CGTAGAAAGGCAAGAAAGAT
Product: putative cyclase
Products: NA
Alternate protein names: Cyclase Family Protein; Polyketide Cyclase; Metal-Dependent Hydrolase; Yclase SCIF3.09c; LOW QUALITY PROTEIN Cyclase; Exported Cyclase; Cyclase Family; Metal-Dependent Cyclase Family Protein
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MLKMLTLGVSVALMGSIGIAQAQAPAPDWTKSKWGPNDEIGAANYLTPELALKAAQLVKTGKVYALGIPVDTKTPAYPPR AFKITVVQPGQAGSPGMGPSKTTYNDDIIEGWVGVGSQLDGLGHIGVEHVYYNGNKIADFGDATGLKKLGIDKVPPMVTR GVLLDMAAHFGTDVVKEGTAFNVKEIEDVAKKQGVEIRQGDVVLFHTGWISLIGKDDKRYNTGEPGVGVEGAKYLTSKGV VAVGADTWGVEVVPFESKNIFEVHQILLPMNGTYILENMNTADLARDKVYEFMFVLGQPRFKGAVQSMINPVAIR
Sequences:
>Translated_315_residues MLKMLTLGVSVALMGSIGIAQAQAPAPDWTKSKWGPNDEIGAANYLTPELALKAAQLVKTGKVYALGIPVDTKTPAYPPR AFKITVVQPGQAGSPGMGPSKTTYNDDIIEGWVGVGSQLDGLGHIGVEHVYYNGNKIADFGDATGLKKLGIDKVPPMVTR GVLLDMAAHFGTDVVKEGTAFNVKEIEDVAKKQGVEIRQGDVVLFHTGWISLIGKDDKRYNTGEPGVGVEGAKYLTSKGV VAVGADTWGVEVVPFESKNIFEVHQILLPMNGTYILENMNTADLARDKVYEFMFVLGQPRFKGAVQSMINPVAIR >Mature_315_residues MLKMLTLGVSVALMGSIGIAQAQAPAPDWTKSKWGPNDEIGAANYLTPELALKAAQLVKTGKVYALGIPVDTKTPAYPPR AFKITVVQPGQAGSPGMGPSKTTYNDDIIEGWVGVGSQLDGLGHIGVEHVYYNGNKIADFGDATGLKKLGIDKVPPMVTR GVLLDMAAHFGTDVVKEGTAFNVKEIEDVAKKQGVEIRQGDVVLFHTGWISLIGKDDKRYNTGEPGVGVEGAKYLTSKGV VAVGADTWGVEVVPFESKNIFEVHQILLPMNGTYILENMNTADLARDKVYEFMFVLGQPRFKGAVQSMINPVAIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33757; Mature: 33757
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKMLTLGVSVALMGSIGIAQAQAPAPDWTKSKWGPNDEIGAANYLTPELALKAAQLVKT CCEEEEECHHEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC GKVYALGIPVDTKTPAYPPRAFKITVVQPGQAGSPGMGPSKTTYNDDIIEGWVGVGSQLD CCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC GLGHIGVEHVYYNGNKIADFGDATGLKKLGIDKVPPMVTRGVLLDMAAHFGTDVVKEGTA CCCCCCEEEEEECCCEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCC FNVKEIEDVAKKQGVEIRQGDVVLFHTGWISLIGKDDKRYNTGEPGVGVEGAKYLTSKGV CCHHHHHHHHHHCCCEEECCCEEEEECCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCE VAVGADTWGVEVVPFESKNIFEVHQILLPMNGTYILENMNTADLARDKVYEFMFVLGQPR EEEECCCCCEEEEEECCCCHHEEHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCH FKGAVQSMINPVAIR HHHHHHHHCCCCCCC >Mature Secondary Structure MLKMLTLGVSVALMGSIGIAQAQAPAPDWTKSKWGPNDEIGAANYLTPELALKAAQLVKT CCEEEEECHHEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC GKVYALGIPVDTKTPAYPPRAFKITVVQPGQAGSPGMGPSKTTYNDDIIEGWVGVGSQLD CCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC GLGHIGVEHVYYNGNKIADFGDATGLKKLGIDKVPPMVTRGVLLDMAAHFGTDVVKEGTA CCCCCCEEEEEECCCEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCC FNVKEIEDVAKKQGVEIRQGDVVLFHTGWISLIGKDDKRYNTGEPGVGVEGAKYLTSKGV CCHHHHHHHHHHCCCEEECCCEEEEECCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCE VAVGADTWGVEVVPFESKNIFEVHQILLPMNGTYILENMNTADLARDKVYEFMFVLGQPR EEEECCCCCEEEEEECCCCHHEEHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCH FKGAVQSMINPVAIR HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA