| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749506
Identifier: 86749506
GI number: 86749506
Start: 2738107
End: 2739144
Strand: Direct
Name: 86749506
Synonym: RPB_2386
Alternate gene names: NA
Gene position: 2738107-2739144 (Clockwise)
Preceding gene: 86749505
Following gene: 86749507
Centisome position: 51.36
GC content: 71.87
Gene sequence:
>1038_bases ATGGAGTGGGCCTCATGGTCGGCGGCAGCCGACCGCATTCTGCATTCGCCGAATTTGCCGATCTGGGCCGCGATGGCCGC TGCGGCTGTTTTCGTCCTGATTCTCGTCATCGCGCTGGTGCGGGCCGACAGATCGGTGGCGAATGCCGTGCTCGGCGTCA TCACGCTGCTCGCCGTGGGCGTTGCCGGCCTCGCATCTTGGCGGCTGTTCGTCGACAGCGCGGGTCCGGTGGTGCGCAAC GCGGACGCGGGGCGGGCCATCAACACCATGCCGGCGCTGGCCTGCGTCGACGACCTCGCCGGCGATGCCGTGCAGGCCGC ATGCGAACGCGCGCTGTTCTCGTCGCCCGAGACGGTGGCGGCGGCGGTGTCCTATGCGTCGGCGCGAATGGCGCAACTGA CGGCGCAGGGCGATGTCGCTTCGGCCAGCAAGCGGATGACGCCCGAACTCGACCGGCTGCGGCGTTCGATCGAGCGTGAC CGCTACGGCCTGATCGCCTATGTGCTGACGGCGCAGGATCGTTGCGTGCCTGATCAGTGCGCCGCCTTCCAGTCGCTCAC CGATCACAGCCGGATCGCGGCCAACATGAACGAACACGTCTACGAGACCACCGTCACCCGGGCAGCGCCCGCGTGGGGCG CGGGAAGTGGGCCGCTCGCAGCGGCCGCTCCGGTGCCTGGCGGCGTGCTCGGCGTCGCCGAGGCGCCGAGCGGCAAGCCG GTCAATATCGATTTCGCGACCTCGTCCTCGATTCCGCCGATCTCGATCATGAACGAGCCGGCGCCGGCCGCGCCGAAGCC TGCCGCGACGGCCGCCGGCAATGCCGCCGGTCACGCGGCGCCGTCGGCCGCCGCCAAGCGGCCGCCCGCAGCCCCGAGCG CCCAGGCTCCGGCCAACGGCCAGGCAGCCGCCGCCGGCGGGCAGGCTCCGGCGAATGCCCAGGCTGCGGTCAGGCGACCG CCGCCGCCGCCGAAACCGAAGCCGCCGGTGGCGGCGCCGGTCCAGCTTGCGCCCGCGGAGGCAAATCCGGATAACTGA
Upstream 100 bases:
>100_bases ACGGAACCAGGGTTGAATGACCCGCCCACGACGCTCGCGCGTATTTTCGTCGCAAATCCCGTGTTGATTTGAACCGGGTA GGCGCAAGGGGACAACGCGC
Downstream 100 bases:
>100_bases TCGCGACCCTCTCCCGCATCAGGAACGATCCGAACCAATGGCGCTCAATCTGATCAAGCTGGCGGTCGGCTGCGAGTCGG TGAAGGACCTGACCAGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MEWASWSAAADRILHSPNLPIWAAMAAAAVFVLILVIALVRADRSVANAVLGVITLLAVGVAGLASWRLFVDSAGPVVRN ADAGRAINTMPALACVDDLAGDAVQAACERALFSSPETVAAAVSYASARMAQLTAQGDVASASKRMTPELDRLRRSIERD RYGLIAYVLTAQDRCVPDQCAAFQSLTDHSRIAANMNEHVYETTVTRAAPAWGAGSGPLAAAAPVPGGVLGVAEAPSGKP VNIDFATSSSIPPISIMNEPAPAAPKPAATAAGNAAGHAAPSAAAKRPPAAPSAQAPANGQAAAAGGQAPANAQAAVRRP PPPPKPKPPVAAPVQLAPAEANPDN
Sequences:
>Translated_345_residues MEWASWSAAADRILHSPNLPIWAAMAAAAVFVLILVIALVRADRSVANAVLGVITLLAVGVAGLASWRLFVDSAGPVVRN ADAGRAINTMPALACVDDLAGDAVQAACERALFSSPETVAAAVSYASARMAQLTAQGDVASASKRMTPELDRLRRSIERD RYGLIAYVLTAQDRCVPDQCAAFQSLTDHSRIAANMNEHVYETTVTRAAPAWGAGSGPLAAAAPVPGGVLGVAEAPSGKP VNIDFATSSSIPPISIMNEPAPAAPKPAATAAGNAAGHAAPSAAAKRPPAAPSAQAPANGQAAAAGGQAPANAQAAVRRP PPPPKPKPPVAAPVQLAPAEANPDN >Mature_345_residues MEWASWSAAADRILHSPNLPIWAAMAAAAVFVLILVIALVRADRSVANAVLGVITLLAVGVAGLASWRLFVDSAGPVVRN ADAGRAINTMPALACVDDLAGDAVQAACERALFSSPETVAAAVSYASARMAQLTAQGDVASASKRMTPELDRLRRSIERD RYGLIAYVLTAQDRCVPDQCAAFQSLTDHSRIAANMNEHVYETTVTRAAPAWGAGSGPLAAAAPVPGGVLGVAEAPSGKP VNIDFATSSSIPPISIMNEPAPAAPKPAATAAGNAAGHAAPSAAAKRPPAAPSAQAPANGQAAAAGGQAPANAQAAVRRP PPPPKPKPPVAAPVQLAPAEANPDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34794; Mature: 34794
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWASWSAAADRILHSPNLPIWAAMAAAAVFVLILVIALVRADRSVANAVLGVITLLAVG CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VAGLASWRLFVDSAGPVVRNADAGRAINTMPALACVDDLAGDAVQAACERALFSSPETVA HHHHHHHHEEECCCCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH AAVSYASARMAQLTAQGDVASASKRMTPELDRLRRSIERDRYGLIAYVLTAQDRCVPDQC HHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHH AAFQSLTDHSRIAANMNEHVYETTVTRAAPAWGAGSGPLAAAAPVPGGVLGVAEAPSGKP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCE VNIDFATSSSIPPISIMNEPAPAAPKPAATAAGNAAGHAAPSAAAKRPPAAPSAQAPANG EEEEECCCCCCCCCEECCCCCCCCCCCCHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC QAAAAGGQAPANAQAAVRRPPPPPKPKPPVAAPVQLAPAEANPDN CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEECCCCCCCCC >Mature Secondary Structure MEWASWSAAADRILHSPNLPIWAAMAAAAVFVLILVIALVRADRSVANAVLGVITLLAVG CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VAGLASWRLFVDSAGPVVRNADAGRAINTMPALACVDDLAGDAVQAACERALFSSPETVA HHHHHHHHEEECCCCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH AAVSYASARMAQLTAQGDVASASKRMTPELDRLRRSIERDRYGLIAYVLTAQDRCVPDQC HHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHH AAFQSLTDHSRIAANMNEHVYETTVTRAAPAWGAGSGPLAAAAPVPGGVLGVAEAPSGKP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCE VNIDFATSSSIPPISIMNEPAPAAPKPAATAAGNAAGHAAPSAAAKRPPAAPSAQAPANG EEEEECCCCCCCCCEECCCCCCCCCCCCHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC QAAAAGGQAPANAQAAVRRPPPPPKPKPPVAAPVQLAPAEANPDN CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA