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The map label for this gene is yciF [H]

Identifier: 86749376

GI number: 86749376

Start: 2603266

End: 2603775

Strand: Reverse

Name: yciF [H]

Synonym: RPB_2256

Alternate gene names: 86749376

Gene position: 2603775-2603266 (Counterclockwise)

Preceding gene: 86749379

Following gene: 86749375

Centisome position: 48.84

GC content: 62.16

Gene sequence:

>510_bases
ATGGGCCTGTTCACCAAGGATATCCAGACCATGGACGACATGCTGCTGCATGGCCTGCGCGACATCTATTACGCCGAGCA
GCAGATCATCAAGGCACTGCCGACGATGATCGAGCAAGCGACCAACCGCGATCTCTCGCAGGGCCTCAAGGCGCATCTCG
AAGAGACCCACAAGCAGATCGAGCGGCTCGACCAGGCGTTCAAGAAGCTGGGCGAGACCCCGTCGGGCACCGATTGCCCG
GCGATCGACGGACTGATCAAGGAGGCCAACGCGACCTCGAGCGAGATCGCCGACAAGAGCGTGCTCGACGCCGCGATCGT
CGCCAATGCGCAGGCGGTCGAGCACTACGAGATCGCGCGTTACGGCACGCTGATCGCCTGGGCCGAAGAACTCGGCCACG
ACGACATCGTCCGCTTCCTGACCACGAATCTGAACGAGGAAAAAGCGGCCAACACCAAGCTCAACACCGTGGCGCTCCGG
AAGGGCGTCAATCGCAAGGCCGCAAGCTGA

Upstream 100 bases:

>100_bases
CGAACGCCGACACCCGCGCGGCGCGGCGCGGCGCGAGGAACCGAAACGTCCCGTTCCAGTTGTGCAGGAAACCAGCTCCC
AAACCCAGACGGAGGCGACG

Downstream 100 bases:

>100_bases
AGGATCATTCGATGAAACGCACCGCAATCATTCTTGGATGCCTGTTGCTGGCCTCGCCGGCCCTGGCGCAATCGATCACC
GAGAAGACCGGCGTCAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MGLFTKDIQTMDDMLLHGLRDIYYAEQQIIKALPTMIEQATNRDLSQGLKAHLEETHKQIERLDQAFKKLGETPSGTDCP
AIDGLIKEANATSSEIADKSVLDAAIVANAQAVEHYEIARYGTLIAWAEELGHDDIVRFLTTNLNEEKAANTKLNTVALR
KGVNRKAAS

Sequences:

>Translated_169_residues
MGLFTKDIQTMDDMLLHGLRDIYYAEQQIIKALPTMIEQATNRDLSQGLKAHLEETHKQIERLDQAFKKLGETPSGTDCP
AIDGLIKEANATSSEIADKSVLDAAIVANAQAVEHYEIARYGTLIAWAEELGHDDIVRFLTTNLNEEKAANTKLNTVALR
KGVNRKAAS
>Mature_168_residues
GLFTKDIQTMDDMLLHGLRDIYYAEQQIIKALPTMIEQATNRDLSQGLKAHLEETHKQIERLDQAFKKLGETPSGTDCPA
IDGLIKEANATSSEIADKSVLDAAIVANAQAVEHYEIARYGTLIAWAEELGHDDIVRFLTTNLNEEKAANTKLNTVALRK
GVNRKAAS

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=166, Percent_Identity=43.9759036144578, Blast_Score=129, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18678; Mature: 18547

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFTKDIQTMDDMLLHGLRDIYYAEQQIIKALPTMIEQATNRDLSQGLKAHLEETHKQI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
ERLDQAFKKLGETPSGTDCPAIDGLIKEANATSSEIADKSVLDAAIVANAQAVEHYEIAR
HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGTLIAWAEELGHDDIVRFLTTNLNEEKAANTKLNTVALRKGVNRKAAS
HHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GLFTKDIQTMDDMLLHGLRDIYYAEQQIIKALPTMIEQATNRDLSQGLKAHLEETHKQI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
ERLDQAFKKLGETPSGTDCPAIDGLIKEANATSSEIADKSVLDAAIVANAQAVEHYEIAR
HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGTLIAWAEELGHDDIVRFLTTNLNEEKAANTKLNTVALRKGVNRKAAS
HHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]