| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749267
Identifier: 86749267
GI number: 86749267
Start: 2435757
End: 2436377
Strand: Reverse
Name: 86749267
Synonym: RPB_2146
Alternate gene names: NA
Gene position: 2436377-2435757 (Counterclockwise)
Preceding gene: 86749268
Following gene: 86749264
Centisome position: 45.7
GC content: 64.57
Gene sequence:
>621_bases ATGTTTGTTAGCAGGGGATTGCGGACGGGACTGATCATTGCCGCGGCGGTCGTCACCATGACGGCAGCGGCACAAGCGGG AGACAAGGTTCGCTACGCCAGCATCGGCGATACGACGCGCGCACCGATCGGCTGGATCGAATTCTGCGCCGACAATCCCG GCGACTGCCGCAGCGGACGCAGCCAGGCGCGCGACATCGTCCTGACGCAGACCGCGTGGCGGGATCTGCTCAAGGTCAAC AGCTGGGTCAACGACACCATCAAGCCGCTGACCGACATGGACCATTGGGGCGTGATCGAGAAATGGTCGCTGCCCAGTGA CGGCTACGGCGATTGCGAGGACTACGTGCTGCTGAAGCGCAAGATGCTGATCGCCGCCGGCTGGCCGCGCGAGGCACTGC TGATCACCGTGGTCCGCGACAAGAAGAACGAAGGCCACGCGGTGCTGACGGTGAAGACCGACAAGGGCGAGTTCGTCCTC GACAACCAGAACGAGGAGGTCGTCGCCTGGACCGAGACCGGCTACCGCTTCGTCAAGCGGCAGTCGCAGACCGACGCCAA TGAATGGGTCGCACTCGGCGATTCCCGCCCGGCCGTCGCCACCGCCAGTTCGCAACGCTGA
Upstream 100 bases:
>100_bases TCAGTTTGATTAGTATTCGCCTCGACTTTACTTAGTTGATTTAGCGGCCCCGCAAATCGTTTGTGGAAAAGATGGTCCCA ACAAGAAAACGGGGGCCACA
Downstream 100 bases:
>100_bases GGCGCCGACAGCAACAAGGCAACACCAACACAGGGACACACGATCCGGTCAAATCCCCACCCCTCCCCGTCCCAGATCGG ATCGTGCGCGGCCAGCCTCC
Product: transglutaminase-like cysteine peptidase, BTLCP
Products: NA
Alternate protein names: Transglutaminase-Like Cysteine Peptidase BTLCP; Transglutaminase Family Protein Cysteine Peptidase Btlcp; Periplasmic Protein-Like Protein; And 4.1 Domain Protein; Peptide Signal; Signal Peptide; Transglutaminase Cysteine Peptidase BTLCP; Transglutaminase-Like Cysteine Peptidase; Transglutaminase-Like Protein; Bacterial Transglutaminase-Like Cysteine Peptidase
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MFVSRGLRTGLIIAAAVVTMTAAAQAGDKVRYASIGDTTRAPIGWIEFCADNPGDCRSGRSQARDIVLTQTAWRDLLKVN SWVNDTIKPLTDMDHWGVIEKWSLPSDGYGDCEDYVLLKRKMLIAAGWPREALLITVVRDKKNEGHAVLTVKTDKGEFVL DNQNEEVVAWTETGYRFVKRQSQTDANEWVALGDSRPAVATASSQR
Sequences:
>Translated_206_residues MFVSRGLRTGLIIAAAVVTMTAAAQAGDKVRYASIGDTTRAPIGWIEFCADNPGDCRSGRSQARDIVLTQTAWRDLLKVN SWVNDTIKPLTDMDHWGVIEKWSLPSDGYGDCEDYVLLKRKMLIAAGWPREALLITVVRDKKNEGHAVLTVKTDKGEFVL DNQNEEVVAWTETGYRFVKRQSQTDANEWVALGDSRPAVATASSQR >Mature_206_residues MFVSRGLRTGLIIAAAVVTMTAAAQAGDKVRYASIGDTTRAPIGWIEFCADNPGDCRSGRSQARDIVLTQTAWRDLLKVN SWVNDTIKPLTDMDHWGVIEKWSLPSDGYGDCEDYVLLKRKMLIAAGWPREALLITVVRDKKNEGHAVLTVKTDKGEFVL DNQNEEVVAWTETGYRFVKRQSQTDANEWVALGDSRPAVATASSQR
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22844; Mature: 22844
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVSRGLRTGLIIAAAVVTMTAAAQAGDKVRYASIGDTTRAPIGWIEFCADNPGDCRSGR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCH SQARDIVLTQTAWRDLLKVNSWVNDTIKPLTDMDHWGVIEKWSLPSDGYGDCEDYVLLKR HHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHH KMLIAAGWPREALLITVVRDKKNEGHAVLTVKTDKGEFVLDNQNEEVVAWTETGYRFVKR HHHEECCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCHHHHHH QSQTDANEWVALGDSRPAVATASSQR HCCCCCCCEEEECCCCCCEECCCCCC >Mature Secondary Structure MFVSRGLRTGLIIAAAVVTMTAAAQAGDKVRYASIGDTTRAPIGWIEFCADNPGDCRSGR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCH SQARDIVLTQTAWRDLLKVNSWVNDTIKPLTDMDHWGVIEKWSLPSDGYGDCEDYVLLKR HHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHH KMLIAAGWPREALLITVVRDKKNEGHAVLTVKTDKGEFVLDNQNEEVVAWTETGYRFVKR HHHEECCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCHHHHHH QSQTDANEWVALGDSRPAVATASSQR HCCCCCCCEEEECCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA