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The map label for this gene is omp2b [H]

Identifier: 86749264

GI number: 86749264

Start: 2431712

End: 2433199

Strand: Reverse

Name: omp2b [H]

Synonym: RPB_2143

Alternate gene names: 86749264

Gene position: 2433199-2431712 (Counterclockwise)

Preceding gene: 86749267

Following gene: 86749262

Centisome position: 45.64

GC content: 65.12

Gene sequence:

>1488_bases
ATGAATTTCGTTAAAGGCCTGATGCTGGGCAGCACGGCCGTCCTGATGGCGACTTCGGCGCAAGCCGCCGATCTTCCGCT
CAAGGCGAAGGCGGTCGAATACGTGAAGGTCTGCTCGCTCTACGGCGCGGGCTTCTACTACATCCCGGGCACCGACACCT
GCATCAAGCTCGGCGGCTACATCCGCGCCGAGTACGCGTTCAATGCCGGCGGCATGACCGAAACGCCCTCCTGGTCCGGT
AACGCCGGTCAGGGCAACCGGCTGTCGAACAACACCATCATGCGTTCGCGCGCCGATGTGAACATCGACACCCGCACCGC
GACCGAATACGGCGTCGTGCGCACCTTCTTCGATTCGACCTTCACCTGGACCACCGGCAGCGACAGCGTCGCCGGCGGCA
GCCTCGGCGTCTACTTCGCCTTCATCCAGTTCGCCGGCTTCACCTTCGGTAAGGCGGTCTCGCAGTTCTCGACGCCGTGG
CACGGCGGTCCGGGCAACATCACGTCGAACCTGCTCGGCGGCGACGACACCTCGACCGGCATCAACCAGGTCAGCTACAC
CGCCGAATTCGGCAACGGCGTGTCGGGCTCGGTCTCGCTCGAAGACCAGAGCGCCTACCGCACTTCGCAGCTCTACAACG
TCAACGGCGCCACTCCGCTGATCTTCGCGGGCTCGGCCTCGACCTACTTCGCAGGCAACGGTTCGGGCCTGAACAACTAC
GCCGGCACGCAGATCCCCGACATCGTCGGCAAAATCCGCGTCGATCAGGCCTGGGGTCTGTTCCAGGTTTCGGCCGCCGC
GCATCAGATCCGCGCCAGCTACTACGTCCCGACCCTCGAGACCTCCGGTCATCCGGACGACAAGTGGGGCTTCGCGGTCC
TCGCCGCTCTGTCGCTCAAGAACCTGCCCACCGGCAAGGGTGACTCGATCAACCTCGATGCCACCTACGCTGACGGCGCG
ACCCGCTACGTGATCGGCGGTACCAGCCCGAACGCGTTCGCCATGTACGGCAGCAGCAGCGCCGTCGGCGCGTATCAGAG
CGTCGCCTTCGCGTCCTCTCCGGACGGCGTCTTCGGCACCGGCGGTCAGATCCAGACCGTCAAGGCCTGGGGCATCCGCG
GCGCGTTCAACCACAACTGGAACGCCAACTGGGCGAGCTCGCTGTTCGGTGCCTACTCGTCGGTCGATTTCGGCGGCGCC
GGCGCAGCGCTCTACAATGCGGGCCTCAACGCAGCGGCTCCGGGCTTCGGCACCACCTACACCGGCAACCCGAACTTCAA
CATCGCTCAGATCGGCCTCCGCACCGTGTGGACTCCGGTCAAGAACCTGAGCTTCTCGGGCGAAGTGATGTGGATGCACC
TCGACCAGAACTACTCCGGCGTGACCGCCGGCAACGTCTCGCCGGCCGCCACCAAGCCGTCGGCGCGTTATGAGTTCAAG
GACCAGGACACTGTGGTGGGCGCCGTTCGCGTTCAGCGCACGTTCTAA

Upstream 100 bases:

>100_bases
AGGATCAGCGGGCGCTCTCAGGGTGGTTCGCGGGCAGCGCCGTGGGGCCGATACTGGAAACCCCTCGGCATTGCCCAACC
GGCAAACTTGGAGGTTTCAC

Downstream 100 bases:

>100_bases
GCCACAACTCAACGGTTGATGTAGACCTCCAGGAACCTCCGGCGATGCCCCGCCGGAGGTTCTCCTGTTTCAAGGGCTCG
ATCGAGCGACGCGCGATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MNFVKGLMLGSTAVLMATSAQAADLPLKAKAVEYVKVCSLYGAGFYYIPGTDTCIKLGGYIRAEYAFNAGGMTETPSWSG
NAGQGNRLSNNTIMRSRADVNIDTRTATEYGVVRTFFDSTFTWTTGSDSVAGGSLGVYFAFIQFAGFTFGKAVSQFSTPW
HGGPGNITSNLLGGDDTSTGINQVSYTAEFGNGVSGSVSLEDQSAYRTSQLYNVNGATPLIFAGSASTYFAGNGSGLNNY
AGTQIPDIVGKIRVDQAWGLFQVSAAAHQIRASYYVPTLETSGHPDDKWGFAVLAALSLKNLPTGKGDSINLDATYADGA
TRYVIGGTSPNAFAMYGSSSAVGAYQSVAFASSPDGVFGTGGQIQTVKAWGIRGAFNHNWNANWASSLFGAYSSVDFGGA
GAALYNAGLNAAAPGFGTTYTGNPNFNIAQIGLRTVWTPVKNLSFSGEVMWMHLDQNYSGVTAGNVSPAATKPSARYEFK
DQDTVVGAVRVQRTF

Sequences:

>Translated_495_residues
MNFVKGLMLGSTAVLMATSAQAADLPLKAKAVEYVKVCSLYGAGFYYIPGTDTCIKLGGYIRAEYAFNAGGMTETPSWSG
NAGQGNRLSNNTIMRSRADVNIDTRTATEYGVVRTFFDSTFTWTTGSDSVAGGSLGVYFAFIQFAGFTFGKAVSQFSTPW
HGGPGNITSNLLGGDDTSTGINQVSYTAEFGNGVSGSVSLEDQSAYRTSQLYNVNGATPLIFAGSASTYFAGNGSGLNNY
AGTQIPDIVGKIRVDQAWGLFQVSAAAHQIRASYYVPTLETSGHPDDKWGFAVLAALSLKNLPTGKGDSINLDATYADGA
TRYVIGGTSPNAFAMYGSSSAVGAYQSVAFASSPDGVFGTGGQIQTVKAWGIRGAFNHNWNANWASSLFGAYSSVDFGGA
GAALYNAGLNAAAPGFGTTYTGNPNFNIAQIGLRTVWTPVKNLSFSGEVMWMHLDQNYSGVTAGNVSPAATKPSARYEFK
DQDTVVGAVRVQRTF
>Mature_495_residues
MNFVKGLMLGSTAVLMATSAQAADLPLKAKAVEYVKVCSLYGAGFYYIPGTDTCIKLGGYIRAEYAFNAGGMTETPSWSG
NAGQGNRLSNNTIMRSRADVNIDTRTATEYGVVRTFFDSTFTWTTGSDSVAGGSLGVYFAFIQFAGFTFGKAVSQFSTPW
HGGPGNITSNLLGGDDTSTGINQVSYTAEFGNGVSGSVSLEDQSAYRTSQLYNVNGATPLIFAGSASTYFAGNGSGLNNY
AGTQIPDIVGKIRVDQAWGLFQVSAAAHQIRASYYVPTLETSGHPDDKWGFAVLAALSLKNLPTGKGDSINLDATYADGA
TRYVIGGTSPNAFAMYGSSSAVGAYQSVAFASSPDGVFGTGGQIQTVKAWGIRGAFNHNWNANWASSLFGAYSSVDFGGA
GAALYNAGLNAAAPGFGTTYTGNPNFNIAQIGLRTVWTPVKNLSFSGEVMWMHLDQNYSGVTAGNVSPAATKPSARYEFK
DQDTVVGAVRVQRTF

Specific function: Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alphaproteobacteria porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003684 [H]

Pfam domain/function: PF02530 Porin_2 [H]

EC number: NA

Molecular weight: Translated: 51939; Mature: 51939

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFVKGLMLGSTAVLMATSAQAADLPLKAKAVEYVKVCSLYGAGFYYIPGTDTCIKLGGY
CCHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCE
IRAEYAFNAGGMTETPSWSGNAGQGNRLSNNTIMRSRADVNIDTRTATEYGVVRTFFDST
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCCCCHHHHHEEECCCE
FTWTTGSDSVAGGSLGVYFAFIQFAGFTFGKAVSQFSTPWHGGPGNITSNLLGGDDTSTG
EEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCC
INQVSYTAEFGNGVSGSVSLEDQSAYRTSQLYNVNGATPLIFAGSASTYFAGNGSGLNNY
CCEEEEEECCCCCCCCEEEECCCCCHHHHEEEECCCCCEEEEECCCCEEEECCCCCCCCC
AGTQIPDIVGKIRVDQAWGLFQVSAAAHQIRASYYVPTLETSGHPDDKWGFAVLAALSLK
CCCCCCHHHCEEEECCCCCEEEEHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHH
NLPTGKGDSINLDATYADGATRYVIGGTSPNAFAMYGSSSAVGAYQSVAFASSPDGVFGT
CCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCHHHHEEECCCCCCCEEC
GGQIQTVKAWGIRGAFNHNWNANWASSLFGAYSSVDFGGAGAALYNAGLNAAAPGFGTTY
CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCEE
TGNPNFNIAQIGLRTVWTPVKNLSFSGEVMWMHLDQNYSGVTAGNVSPAATKPSARYEFK
CCCCCCEEEEECHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEC
DQDTVVGAVRVQRTF
CCCEEEEEEEEEECC
>Mature Secondary Structure
MNFVKGLMLGSTAVLMATSAQAADLPLKAKAVEYVKVCSLYGAGFYYIPGTDTCIKLGGY
CCHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCE
IRAEYAFNAGGMTETPSWSGNAGQGNRLSNNTIMRSRADVNIDTRTATEYGVVRTFFDST
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCCCCHHHHHEEECCCE
FTWTTGSDSVAGGSLGVYFAFIQFAGFTFGKAVSQFSTPWHGGPGNITSNLLGGDDTSTG
EEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCC
INQVSYTAEFGNGVSGSVSLEDQSAYRTSQLYNVNGATPLIFAGSASTYFAGNGSGLNNY
CCEEEEEECCCCCCCCEEEECCCCCHHHHEEEECCCCCEEEEECCCCEEEECCCCCCCCC
AGTQIPDIVGKIRVDQAWGLFQVSAAAHQIRASYYVPTLETSGHPDDKWGFAVLAALSLK
CCCCCCHHHCEEEECCCCCEEEEHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHH
NLPTGKGDSINLDATYADGATRYVIGGTSPNAFAMYGSSSAVGAYQSVAFASSPDGVFGT
CCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCHHHHEEECCCCCCCEEC
GGQIQTVKAWGIRGAFNHNWNANWASSLFGAYSSVDFGGAGAALYNAGLNAAAPGFGTTY
CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCEE
TGNPNFNIAQIGLRTVWTPVKNLSFSGEVMWMHLDQNYSGVTAGNVSPAATKPSARYEFK
CCCCCCEEEEECHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEC
DQDTVVGAVRVQRTF
CCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2509359 [H]