| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749253
Identifier: 86749253
GI number: 86749253
Start: 2424712
End: 2424957
Strand: Reverse
Name: 86749253
Synonym: RPB_2132
Alternate gene names: NA
Gene position: 2424957-2424712 (Counterclockwise)
Preceding gene: 86749258
Following gene: 86749252
Centisome position: 45.48
GC content: 60.57
Gene sequence:
>246_bases ATGTCCGACCACGTGGTTCCACATTTCCAGAACGAAGCCGGCGTTCCCATGATCGAGATCGGCTCGAAGGAATTCATGTG CGTGGGCGCCAATCCGCCGTTCGATCATCCGCACGTGTTTCTCGATCTCGGCAACGACAACGAGATCATCTGCCCGTATT GCTCGACGCTGTATCGCTACGCGCCGGACCTCGGTCCCGGCGAAGCGCGGCCGCCGGAATGCGTGCTGAAGGACAAGGTC GCCTGA
Upstream 100 bases:
>100_bases GCAAAGCGTGTCTGCGCGCTCTAGGAATCAGGAGCCGACGCCGGTATGGTGCGCTGCACCGTGATGATTGCCCTCTCCGC CGCGAGTTAAGGTGAGCCGA
Downstream 100 bases:
>100_bases TCGCGCAGTGCCGGCTTCGCGCACCATCGTCATCGCGGGCGCGGGCATCGGCGGACTAACAGCTTCGCTCGCGCTCGCGG CGCGCGGCTTCCGCGTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSDHVVPHFQNEAGVPMIEIGSKEFMCVGANPPFDHPHVFLDLGNDNEIICPYCSTLYRYAPDLGPGEARPPECVLKDKV A
Sequences:
>Translated_81_residues MSDHVVPHFQNEAGVPMIEIGSKEFMCVGANPPFDHPHVFLDLGNDNEIICPYCSTLYRYAPDLGPGEARPPECVLKDKV A >Mature_80_residues SDHVVPHFQNEAGVPMIEIGSKEFMCVGANPPFDHPHVFLDLGNDNEIICPYCSTLYRYAPDLGPGEARPPECVLKDKVA
Specific function: Unknown
COG id: COG4391
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8941; Mature: 8810
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHVVPHFQNEAGVPMIEIGSKEFMCVGANPPFDHPHVFLDLGNDNEIICPYCSTLYRY CCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCEEEEEECCCCCEECHHHHHHHHH APDLGPGEARPPECVLKDKVA CCCCCCCCCCCCCEECCCCCC >Mature Secondary Structure SDHVVPHFQNEAGVPMIEIGSKEFMCVGANPPFDHPHVFLDLGNDNEIICPYCSTLYRY CCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCEEEEEECCCCCEECHHHHHHHHH APDLGPGEARPPECVLKDKVA CCCCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA