Click here to switch to the map view.

The map label for this gene is 86749071

Identifier: 86749071

GI number: 86749071

Start: 2215371

End: 2215835

Strand: Direct

Name: 86749071

Synonym: RPB_1948

Alternate gene names: NA

Gene position: 2215371-2215835 (Clockwise)

Preceding gene: 86749069

Following gene: 86749072

Centisome position: 41.55

GC content: 68.82

Gene sequence:

>465_bases
ATGTCGATGGAAATCTACGTGTTCTCGGACCAGAGACTGACCACGATCGAGGACTGGCAGCAGGCGCTCGATCGCCGCGG
CGCGCCGCTGCGTCTCTCCGCCGCCCGGCCGTTCGCGGAGCTCAACGGCGCGCTGCCGGCGGTGCTGCGCGATCGACCGA
CGGCGTTCGAATGCGATCATTTCGACGCCGGTGAACTGATGGACGAGGCGGAGGACGTCGCGTTCGACCATCGCTGGCGC
CACGCGCTGGCGTTCCGCTGGGGCGCCGATCTGGCGGCCGGCGAGGCGGCCTATCTGGCGGCCGCCGCCTATGCCGACGC
CACCGGCGGCTGCATCTTCGACTGCGAAGAGGGCGCGCTGATCACGCCGGATCGTGCCACCGAAATCGCCGCCGAGCTGC
AGAAGAGCGGACCGATGATCGAGGAGGTGATCCGTCGGACGCAACAACGCTTCGGCGAGCCGTGA

Upstream 100 bases:

>100_bases
TTACCGTTTTGCGGGTGTCGCCGACGTCATCGCTCGGCGGCAGGCCGCGCATCGCCGGACCGCGGTCGCGCGCCGCCGAT
GCGGATCAGGAGCAACCGAC

Downstream 100 bases:

>100_bases
GAGCGTCGCGTCGTCGCCTGCGTGGAGCGAAGCGAACGCGCGGGTGGGCGCGGCGGTGGGGAACTCGCGCAGCACCGCAA
CGGCATCGCACGGAAACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSMEIYVFSDQRLTTIEDWQQALDRRGAPLRLSAARPFAELNGALPAVLRDRPTAFECDHFDAGELMDEAEDVAFDHRWR
HALAFRWGADLAAGEAAYLAAAAYADATGGCIFDCEEGALITPDRATEIAAELQKSGPMIEEVIRRTQQRFGEP

Sequences:

>Translated_154_residues
MSMEIYVFSDQRLTTIEDWQQALDRRGAPLRLSAARPFAELNGALPAVLRDRPTAFECDHFDAGELMDEAEDVAFDHRWR
HALAFRWGADLAAGEAAYLAAAAYADATGGCIFDCEEGALITPDRATEIAAELQKSGPMIEEVIRRTQQRFGEP
>Mature_153_residues
SMEIYVFSDQRLTTIEDWQQALDRRGAPLRLSAARPFAELNGALPAVLRDRPTAFECDHFDAGELMDEAEDVAFDHRWRH
ALAFRWGADLAAGEAAYLAAAAYADATGGCIFDCEEGALITPDRATEIAAELQKSGPMIEEVIRRTQQRFGEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17076; Mature: 16945

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMEIYVFSDQRLTTIEDWQQALDRRGAPLRLSAARPFAELNGALPAVLRDRPTAFECDH
CCEEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCHHHCCCCCEECCCC
FDAGELMDEAEDVAFDHRWRHALAFRWGADLAAGEAAYLAAAAYADATGGCIFDCEEGAL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCE
ITPDRATEIAAELQKSGPMIEEVIRRTQQRFGEP
ECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SMEIYVFSDQRLTTIEDWQQALDRRGAPLRLSAARPFAELNGALPAVLRDRPTAFECDH
CEEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCHHHCCCCCEECCCC
FDAGELMDEAEDVAFDHRWRHALAFRWGADLAAGEAAYLAAAAYADATGGCIFDCEEGAL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCE
ITPDRATEIAAELQKSGPMIEEVIRRTQQRFGEP
ECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA