| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is pgl [H]
Identifier: 86749012
GI number: 86749012
Start: 2161756
End: 2162502
Strand: Reverse
Name: pgl [H]
Synonym: RPB_1889
Alternate gene names: 86749012
Gene position: 2162502-2161756 (Counterclockwise)
Preceding gene: 86749013
Following gene: 86749011
Centisome position: 40.56
GC content: 70.68
Gene sequence:
>747_bases ATGAAGGTCGGCGATCATCGCCAGATCGTCACCGCTGCCGATGCCGAAGCGCTGGCGCGGGTCGCGGCGCAGCGGCTGAT CGCCCGCATCGCGCTGCATCACGAGCGCCCGGCGATCTGCCTGACCGGCGGCTCCGGGCCGCAGCGGATGTTCGAACTGC TCGCGGGCGAATTCGCCGATCGGATTCCATGGCCGCGCGTGCACTGGTTCATCAGCGACGAACGCTTCGTGCCGTTCGAT AGCCCGCTAAGCAACATGGGCGCGATCAAGCGCGTGCTGCTCGACGGCCGCGCGCCGCCGCAGAACATCCACGCCATTCC GGCGCACGACAGCGCCACCCCGGACGAGGCCGCGCAGCGCTACGCGCGCGACTTGCAGGCGTTCTACGGCGCGGCAACGC TGGATCCCAAGCGGCCGCTGTTCGATCTGGTGCTCGGCGGCGTCGGCCCGGACGGCCACACCGCGTCGCTGTTTCCCGGC TGGCCGCAGCTCGAGGTGACCGATCGCTGGGCCGCTGGGGTCGACACGGCGCATGTCGCGCCGTTCGTGCCGCGCGTCAC CCTCACCTTTCCGGCGCTGGCGTCGTGTAGCGAGATGCTGTTCCTCGTCCACGGCGCGGCCAAGCGGGAGATCGTCGGCC GCATCTTCGCGGGCGCCGATCTGCCGGCCAGCCGCGCCCGATCCAACGGCGAGACGGTGTGGCTGATCACCGAGGACGCG CTGCCGGAGACCGTTCGTGAGCGCTGA
Upstream 100 bases:
>100_bases GCGCCAACGGGCTTCAGACCTACGAAGCCGGCAGCGAAGGCCCGCAGGACGCCGAAACCCTGCTCGCCCGCGACGGCCGC AACTGGCGCGGCTCGGCCAG
Downstream 100 bases:
>100_bases CGATCCCCGAGCCCGCGTCCTGATCGTGATGGGCGTGTCCGGCTCCGGCAAGAGCACCATCGGCGAACGGCTCGCCGAGC GGCTCGGCTGGGCCTATCAG
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKVGDHRQIVTAADAEALARVAAQRLIARIALHHERPAICLTGGSGPQRMFELLAGEFADRIPWPRVHWFISDERFVPFD SPLSNMGAIKRVLLDGRAPPQNIHAIPAHDSATPDEAAQRYARDLQAFYGAATLDPKRPLFDLVLGGVGPDGHTASLFPG WPQLEVTDRWAAGVDTAHVAPFVPRVTLTFPALASCSEMLFLVHGAAKREIVGRIFAGADLPASRARSNGETVWLITEDA LPETVRER
Sequences:
>Translated_248_residues MKVGDHRQIVTAADAEALARVAAQRLIARIALHHERPAICLTGGSGPQRMFELLAGEFADRIPWPRVHWFISDERFVPFD SPLSNMGAIKRVLLDGRAPPQNIHAIPAHDSATPDEAAQRYARDLQAFYGAATLDPKRPLFDLVLGGVGPDGHTASLFPG WPQLEVTDRWAAGVDTAHVAPFVPRVTLTFPALASCSEMLFLVHGAAKREIVGRIFAGADLPASRARSNGETVWLITEDA LPETVRER >Mature_248_residues MKVGDHRQIVTAADAEALARVAAQRLIARIALHHERPAICLTGGSGPQRMFELLAGEFADRIPWPRVHWFISDERFVPFD SPLSNMGAIKRVLLDGRAPPQNIHAIPAHDSATPDEAAQRYARDLQAFYGAATLDPKRPLFDLVLGGVGPDGHTASLFPG WPQLEVTDRWAAGVDTAHVAPFVPRVTLTFPALASCSEMLFLVHGAAKREIVGRIFAGADLPASRARSNGETVWLITEDA LPETVRER
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=256, Percent_Identity=32.03125, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI6912586, Length=231, Percent_Identity=34.6320346320346, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI115533060, Length=208, Percent_Identity=32.2115384615385, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI115533058, Length=208, Percent_Identity=32.2115384615385, Blast_Score=87, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324362, Length=215, Percent_Identity=33.0232558139535, Blast_Score=93, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6321957, Length=217, Percent_Identity=29.4930875576037, Blast_Score=92, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6319918, Length=245, Percent_Identity=30.6122448979592, Blast_Score=91, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6321687, Length=226, Percent_Identity=30.0884955752212, Blast_Score=88, Evalue=1e-18, Organism=Drosophila melanogaster, GI24641119, Length=217, Percent_Identity=29.0322580645161, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 27044; Mature: 27044
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVGDHRQIVTAADAEALARVAAQRLIARIALHHERPAICLTGGSGPQRMFELLAGEFAD CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH RIPWPRVHWFISDERFVPFDSPLSNMGAIKRVLLDGRAPPQNIHAIPAHDSATPDEAAQR HCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHH YARDLQAFYGAATLDPKRPLFDLVLGGVGPDGHTASLFPGWPQLEVTDRWAAGVDTAHVA HHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEECCCCCCCCEEECCCHHCCCCCHHHC PFVPRVTLTFPALASCSEMLFLVHGAAKREIVGRIFAGADLPASRARSNGETVWLITEDA CCCCCEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEECCC LPETVRER CCHHHHCC >Mature Secondary Structure MKVGDHRQIVTAADAEALARVAAQRLIARIALHHERPAICLTGGSGPQRMFELLAGEFAD CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH RIPWPRVHWFISDERFVPFDSPLSNMGAIKRVLLDGRAPPQNIHAIPAHDSATPDEAAQR HCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHH YARDLQAFYGAATLDPKRPLFDLVLGGVGPDGHTASLFPGWPQLEVTDRWAAGVDTAHVA HHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEECCCCCCCCEEECCCHHCCCCCHHHC PFVPRVTLTFPALASCSEMLFLVHGAAKREIVGRIFAGADLPASRARSNGETVWLITEDA CCCCCEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEECCC LPETVRER CCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231; 9298645 [H]