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The map label for this gene is yidA [C]

Identifier: 86749010

GI number: 86749010

Start: 2160421

End: 2161233

Strand: Reverse

Name: yidA [C]

Synonym: RPB_1887

Alternate gene names: 86749010

Gene position: 2161233-2160421 (Counterclockwise)

Preceding gene: 86749011

Following gene: 86749007

Centisome position: 40.54

GC content: 67.9

Gene sequence:

>813_bases
ATGAGCCGCATCGCACTGGTGATCTCCGATGTCGACGGCACGCTGCTGACATCCGACAAGCGCCTCACCGACCAGACCCG
CGCCGCGGTGGCGAAGCTGCGGCAGGCCGGCCTCGGCTTCACGCTGACGTCGAGCCGGCCGCCGGTCGGGATGCGGATGT
TCAGCGATCCGCTCGGCATCACGCTGCCGCTCGGGCCGTTCAACGGCAGTTCGATCGTTGAGCCGTCGCTCGCGGTGATC
GAGCAGCACCTCATTCCCGCGGCGGCGGTGAAGACCAGCCTCGATCTGCTCGAGCGCTACGGCATCGACGCCTGGCTCTT
CACCAACGACAATTGGTACATCCGCCGCGACGACGGCAAATACGTGCCGCACGAGCAGCGCACCATCCGGTTCGATCCGA
CCCGGCTCGACGACTTCGCGCCGCTGGCCGACAAGGCCTGCAAGATCGTCGGCGCCAGTCCGGATTTCGCGCTGGTGGCG
CGCTGCGAACAGGAATTGCAGGCGGCGCTCGGCGACGCCGCGCTGGCGATCCGCTCGCAGGACTACTACCTCGACGTCAC
CCCACCCGGTCAGAGCAAGGGCACCTTCGTGCAGGCGATGGCGAGGCGGCTCGGGATCGCGACGGACGCGATCGCCACGC
TCGGCGACATGCAGAACGATCTGGCGATGTTTCGCGTGTCGGGCCTTCCGATCGCGATGGGCAACGCCACCGACGACGTC
AAGCGGCTCGCGTCGCACGTCACCGCCACGAACGACGACGCCGGCTTCGCGGCGGCGATCGACTTCATCCTCGCCCGCAA
CGCGCAGATGTGA

Upstream 100 bases:

>100_bases
CCCCCGACGAGCGCGCCATCACGGTGACCATCGACGCGTCGGTCGCGCAAATCGTCGACGCCATCGTCGTCCAACTCCCT
CAGCAACAGGCCTTGAACCG

Downstream 100 bases:

>100_bases
GGGCGGGCGCCTATTTCGAGCGCTGCACCGCCGGCTTGCCGGTTGCGGCCTTCGCCGCGCTGAGATTATTGGCGGTGATG
ATCAGCGCGATGTGAGTGAG

Product: Cof protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSRIALVISDVDGTLLTSDKRLTDQTRAAVAKLRQAGLGFTLTSSRPPVGMRMFSDPLGITLPLGPFNGSSIVEPSLAVI
EQHLIPAAAVKTSLDLLERYGIDAWLFTNDNWYIRRDDGKYVPHEQRTIRFDPTRLDDFAPLADKACKIVGASPDFALVA
RCEQELQAALGDAALAIRSQDYYLDVTPPGQSKGTFVQAMARRLGIATDAIATLGDMQNDLAMFRVSGLPIAMGNATDDV
KRLASHVTATNDDAGFAAAIDFILARNAQM

Sequences:

>Translated_270_residues
MSRIALVISDVDGTLLTSDKRLTDQTRAAVAKLRQAGLGFTLTSSRPPVGMRMFSDPLGITLPLGPFNGSSIVEPSLAVI
EQHLIPAAAVKTSLDLLERYGIDAWLFTNDNWYIRRDDGKYVPHEQRTIRFDPTRLDDFAPLADKACKIVGASPDFALVA
RCEQELQAALGDAALAIRSQDYYLDVTPPGQSKGTFVQAMARRLGIATDAIATLGDMQNDLAMFRVSGLPIAMGNATDDV
KRLASHVTATNDDAGFAAAIDFILARNAQM
>Mature_269_residues
SRIALVISDVDGTLLTSDKRLTDQTRAAVAKLRQAGLGFTLTSSRPPVGMRMFSDPLGITLPLGPFNGSSIVEPSLAVIE
QHLIPAAAVKTSLDLLERYGIDAWLFTNDNWYIRRDDGKYVPHEQRTIRFDPTRLDDFAPLADKACKIVGASPDFALVAR
CEQELQAALGDAALAIRSQDYYLDVTPPGQSKGTFVQAMARRLGIATDAIATLGDMQNDLAMFRVSGLPIAMGNATDDVK
RLASHVTATNDDAGFAAAIDFILARNAQM

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=277, Percent_Identity=27.0758122743682, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1786982, Length=253, Percent_Identity=24.5059288537549, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081790, Length=269, Percent_Identity=24.1635687732342, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081741, Length=251, Percent_Identity=24.7011952191235, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI48994981, Length=267, Percent_Identity=24.7191011235955, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 29183; Mature: 29051

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS01228 COF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIALVISDVDGTLLTSDKRLTDQTRAAVAKLRQAGLGFTLTSSRPPVGMRMFSDPLGI
CCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCE
TLPLGPFNGSSIVEPSLAVIEQHLIPAAAVKTSLDLLERYGIDAWLFTNDNWYIRRDDGK
EEECCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCC
YVPHEQRTIRFDPTRLDDFAPLADKACKIVGASPDFALVARCEQELQAALGDAALAIRSQ
CCCCCCCEEEECCCCCCCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECC
DYYLDVTPPGQSKGTFVQAMARRLGIATDAIATLGDMQNDLAMFRVSGLPIAMGNATDDV
CEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCEEEECCCHHHH
KRLASHVTATNDDAGFAAAIDFILARNAQM
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRIALVISDVDGTLLTSDKRLTDQTRAAVAKLRQAGLGFTLTSSRPPVGMRMFSDPLGI
CCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCE
TLPLGPFNGSSIVEPSLAVIEQHLIPAAAVKTSLDLLERYGIDAWLFTNDNWYIRRDDGK
EEECCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCC
YVPHEQRTIRFDPTRLDDFAPLADKACKIVGASPDFALVARCEQELQAALGDAALAIRSQ
CCCCCCCEEEECCCCCCCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECC
DYYLDVTPPGQSKGTFVQAMARRLGIATDAIATLGDMQNDLAMFRVSGLPIAMGNATDDV
CEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCEEEECCCHHHH
KRLASHVTATNDDAGFAAAIDFILARNAQM
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA