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The map label for this gene is 86748908

Identifier: 86748908

GI number: 86748908

Start: 2047239

End: 2048036

Strand: Reverse

Name: 86748908

Synonym: RPB_1785

Alternate gene names: NA

Gene position: 2048036-2047239 (Counterclockwise)

Preceding gene: 86748909

Following gene: 86748907

Centisome position: 38.41

GC content: 67.67

Gene sequence:

>798_bases
ATGAATACCGCGCGCATCGTCGTTCTTGTGATTGCCGTCGGCGCCGGCGCCGTCGCCGCCTATCTGGCGAGCGGCATCGG
CGGACAGGAGACGGCCGGCCCGACCGCGCCCGTCGCCCAACTGGCGACGGTCGAAGTGCTGGTCGCGAAGTCCGACATCC
CGCTCGGCCAGCCGGTCGGGCCCTCGGACGTGCAGTGGCAGACCTGGCCGGCCGCCACCGCCAGCTCGAATTTCATCCTT
CGCAGCGAGCGCCCCGACGCCAGCGTCCAGCTCGCCGGCTCGATCGCGCGGTCGCCCTTCATCGCCGGCGAACCGATCCG
CGAACAGAAACTGGTGAAGTCCAACGGCTCCGGCTTCATGGCCGCGATCCTGCCGACCGGGATGCGCGCGATCTCGACCG
AGATCTCGCCGGAAACCGGCGCCGGCGGCTTCATCCTGCCGAACGATCGCGTCGACGTCATCCTGTCGAAGCGCGACCAG
AATCCCGATCGCGTCAAGGGCGGCGACGTCGTCAACTCCGAGATCATCCTCAGCAATATCCGCATTCTGGCGATCGACCA
GACCGTCGAGGAGAAGAACGGCCAGAAGGTCGTGGTCGGCAAGACCGCGACGCTCGAACTGAAACCCGATCAGGCGGAAT
TCCTGGCGCGTGCGCGGCAGAGCGGCACCCTGTCGCTGGCGCTGCGCAGCCTCGCGGACGCCAACGCACCGGCCCGCACC
GAGGAGATCGGCGGCAAGCGCGACAGCATCAACGTGATTCGCTTCGGCGTTTCCACGCAAACGACGACGCCGAAGTGA

Upstream 100 bases:

>100_bases
GCGATTTAGATACGCCTCATTAACCATGCTTTGACGATTAGCTGGTCAACTCCCGGTACTGCGACGCGGCTCGTCGCGAG
TGACCCGGAAAGTAAAGCGT

Downstream 100 bases:

>100_bases
TCAGGGGATCGATATGAGCTGCGGCACCAACCACCGATTCATCCGGACGCTGACGGGCACGGCGATGGCGGTCTCCGCCG
TCGTCGCGCTGACGATGCTG

Product: Flp pilus assembly CpaB

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Flp Pilus Assembly Protein; CtpC Protein; Flp Pilus Assembly Protein Cpab; Flp Pilus Assembly Protein CpaB-Like Protein; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; Pilus Assembly-Related Exported Protein; Fimbriae-Assembly Related Protein; CpaB2 Pilus Assembly Protein; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; SAF Domain Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNTARIVVLVIAVGAGAVAAYLASGIGGQETAGPTAPVAQLATVEVLVAKSDIPLGQPVGPSDVQWQTWPAATASSNFIL
RSERPDASVQLAGSIARSPFIAGEPIREQKLVKSNGSGFMAAILPTGMRAISTEISPETGAGGFILPNDRVDVILSKRDQ
NPDRVKGGDVVNSEIILSNIRILAIDQTVEEKNGQKVVVGKTATLELKPDQAEFLARARQSGTLSLALRSLADANAPART
EEIGGKRDSINVIRFGVSTQTTTPK

Sequences:

>Translated_265_residues
MNTARIVVLVIAVGAGAVAAYLASGIGGQETAGPTAPVAQLATVEVLVAKSDIPLGQPVGPSDVQWQTWPAATASSNFIL
RSERPDASVQLAGSIARSPFIAGEPIREQKLVKSNGSGFMAAILPTGMRAISTEISPETGAGGFILPNDRVDVILSKRDQ
NPDRVKGGDVVNSEIILSNIRILAIDQTVEEKNGQKVVVGKTATLELKPDQAEFLARARQSGTLSLALRSLADANAPART
EEIGGKRDSINVIRFGVSTQTTTPK
>Mature_265_residues
MNTARIVVLVIAVGAGAVAAYLASGIGGQETAGPTAPVAQLATVEVLVAKSDIPLGQPVGPSDVQWQTWPAATASSNFIL
RSERPDASVQLAGSIARSPFIAGEPIREQKLVKSNGSGFMAAILPTGMRAISTEISPETGAGGFILPNDRVDVILSKRDQ
NPDRVKGGDVVNSEIILSNIRILAIDQTVEEKNGQKVVVGKTATLELKPDQAEFLARARQSGTLSLALRSLADANAPART
EEIGGKRDSINVIRFGVSTQTTTPK

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27671; Mature: 27671

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTARIVVLVIAVGAGAVAAYLASGIGGQETAGPTAPVAQLATVEVLVAKSDIPLGQPVG
CCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHEEEEEEEECCCCCCCCCC
PSDVQWQTWPAATASSNFILRSERPDASVQLAGSIARSPFIAGEPIREQKLVKSNGSGFM
CCCCCEEECCCCCCCCCEEEECCCCCCEEEEECHHHCCCCCCCCCHHHHHHHHCCCCCEE
AAILPTGMRAISTEISPETGAGGFILPNDRVDVILSKRDQNPDRVKGGDVVNSEIILSNI
EEECCCCHHHHCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCEECCEEEEECE
RILAIDQTVEEKNGQKVVVGKTATLELKPDQAEFLARARQSGTLSLALRSLADANAPART
EEEEEECHHHHCCCCEEEEECEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH
EEIGGKRDSINVIRFGVSTQTTTPK
HHHCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MNTARIVVLVIAVGAGAVAAYLASGIGGQETAGPTAPVAQLATVEVLVAKSDIPLGQPVG
CCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHEEEEEEEECCCCCCCCCC
PSDVQWQTWPAATASSNFILRSERPDASVQLAGSIARSPFIAGEPIREQKLVKSNGSGFM
CCCCCEEECCCCCCCCCEEEECCCCCCEEEEECHHHCCCCCCCCCHHHHHHHHCCCCCEE
AAILPTGMRAISTEISPETGAGGFILPNDRVDVILSKRDQNPDRVKGGDVVNSEIILSNI
EEECCCCHHHHCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCEECCEEEEECE
RILAIDQTVEEKNGQKVVVGKTATLELKPDQAEFLARARQSGTLSLALRSLADANAPART
EEEEEECHHHHCCCCEEEEECEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH
EEIGGKRDSINVIRFGVSTQTTTPK
HHHCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA