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The map label for this gene is 86748906

Identifier: 86748906

GI number: 86748906

Start: 2045038

End: 2045766

Strand: Reverse

Name: 86748906

Synonym: RPB_1783

Alternate gene names: NA

Gene position: 2045766-2045038 (Counterclockwise)

Preceding gene: 86748907

Following gene: 86748905

Centisome position: 38.37

GC content: 68.18

Gene sequence:

>729_bases
ATGACATCCAGCACACCCGCCCGCGCCATTCGCGGCCTCACCTGTGGGGCCGCTTTGGTCGCCGTCTCGCTGTCGATGGG
CGCATGCACCCACACCAGCGCCAATGACGAGGTCACCGCGAGCGTTCCCAACGACTACCGTCAGCGCCACCCGATCGCGA
TCCAGGAAGCGGATCGCAGCGTCGTGGTGTTCGTCGGCAACGGCCGCGGCGGCCTGACCGCGACGCAACGCGCCGACGTC
GCCGCTTTCGGCAAGGAGTGGCTGCGCGAAGGCACCGGCTCGATCATCGCCGAAGTGCCGTCCGGCACGCCGAACGCCCG
CGCCGCGAGCGACACGATGCGCGAGATCCAGTCGCTGCTGACCTCCGGCGGTGTGCCGGCGCGCGGCGTCATCGTGAAGC
CCTATCAGCCCGCCGATCCGCGCAGCTTCGCCGCGATCCGCCTGCTCTATCCGAAGGTCGCCGCGGTCGCCGGTCCGTGC
GGGTTGTGGCCCGAGGACATCGGGCCGTCGATCAAGAACAAGGGCTATCTGGACAACAAGCCCTATTGGAATTTCGGCTG
CGCCAATCAGCGCAACCTCGCCGCCATGGTGGAGAATCCGTCGGATCTGGTGCAACCGCGGCCGGAGACGCCGGCCTATA
CGGCGCGCCGCGGCGTCACCTTCGAGACCTATCGGACCACCAAGCCCGAAGCCACCGCCAAGGCCCAAGTGAGCAACGTC
GGACCATGA

Upstream 100 bases:

>100_bases
ATCAACCGAATCTATGGCGTCCCCGGCCGCACCGGCCAGAGCCAGACCTACCGGGGCCGGTTCGGCTTCATCACCGACTG
AGCGGGACGAGGACAGGACG

Downstream 100 bases:

>100_bases
TCAGCTACGGACGCCAGAACCAGGACGAGCCCGCGGACGGCGCGCCGATCGGCGCCGCCACGCCGGACGAGCACATCGCG
CCGGCGCCCCGGGTCTCGGT

Product: Type IV pili component-like

Products: NA

Alternate protein names: Pilus Assembly Protein CpaD; Pilus Assembly Protein; Type IV Pili Component-Like; Components Of Type IV Pilus; Component Of Type IV Pilus

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTSSTPARAIRGLTCGAALVAVSLSMGACTHTSANDEVTASVPNDYRQRHPIAIQEADRSVVVFVGNGRGGLTATQRADV
AAFGKEWLREGTGSIIAEVPSGTPNARAASDTMREIQSLLTSGGVPARGVIVKPYQPADPRSFAAIRLLYPKVAAVAGPC
GLWPEDIGPSIKNKGYLDNKPYWNFGCANQRNLAAMVENPSDLVQPRPETPAYTARRGVTFETYRTTKPEATAKAQVSNV
GP

Sequences:

>Translated_242_residues
MTSSTPARAIRGLTCGAALVAVSLSMGACTHTSANDEVTASVPNDYRQRHPIAIQEADRSVVVFVGNGRGGLTATQRADV
AAFGKEWLREGTGSIIAEVPSGTPNARAASDTMREIQSLLTSGGVPARGVIVKPYQPADPRSFAAIRLLYPKVAAVAGPC
GLWPEDIGPSIKNKGYLDNKPYWNFGCANQRNLAAMVENPSDLVQPRPETPAYTARRGVTFETYRTTKPEATAKAQVSNV
GP
>Mature_241_residues
TSSTPARAIRGLTCGAALVAVSLSMGACTHTSANDEVTASVPNDYRQRHPIAIQEADRSVVVFVGNGRGGLTATQRADVA
AFGKEWLREGTGSIIAEVPSGTPNARAASDTMREIQSLLTSGGVPARGVIVKPYQPADPRSFAAIRLLYPKVAAVAGPCG
LWPEDIGPSIKNKGYLDNKPYWNFGCANQRNLAAMVENPSDLVQPRPETPAYTARRGVTFETYRTTKPEATAKAQVSNVG
P

Specific function: Unknown

COG id: COG5461

COG function: function code N; Type IV pili component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25625; Mature: 25494

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSTPARAIRGLTCGAALVAVSLSMGACTHTSANDEVTASVPNDYRQRHPIAIQEADRS
CCCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHCCCEEEEECCCE
VVVFVGNGRGGLTATQRADVAAFGKEWLREGTGSIIAEVPSGTPNARAASDTMREIQSLL
EEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH
TSGGVPARGVIVKPYQPADPRSFAAIRLLYPKVAAVAGPCGLWPEDIGPSIKNKGYLDNK
HCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCC
PYWNFGCANQRNLAAMVENPSDLVQPRPETPAYTARRGVTFETYRTTKPEATAKAQVSNV
CCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHCCC
GP
CC
>Mature Secondary Structure 
TSSTPARAIRGLTCGAALVAVSLSMGACTHTSANDEVTASVPNDYRQRHPIAIQEADRS
CCCCHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHCCCEEEEECCCE
VVVFVGNGRGGLTATQRADVAAFGKEWLREGTGSIIAEVPSGTPNARAASDTMREIQSLL
EEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH
TSGGVPARGVIVKPYQPADPRSFAAIRLLYPKVAAVAGPCGLWPEDIGPSIKNKGYLDNK
HCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCC
PYWNFGCANQRNLAAMVENPSDLVQPRPETPAYTARRGVTFETYRTTKPEATAKAQVSNV
CCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHCCC
GP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA