| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is livK [C]
Identifier: 86748862
GI number: 86748862
Start: 1986262
End: 1987494
Strand: Reverse
Name: livK [C]
Synonym: RPB_1739
Alternate gene names: 86748862
Gene position: 1987494-1986262 (Counterclockwise)
Preceding gene: 86748863
Following gene: 86748861
Centisome position: 37.28
GC content: 60.83
Gene sequence:
>1233_bases ATGCCAACTTCGCCTTCGCGCGCGCTCGTCTTTTCAGCAGCCGTCGCGGTCAGCCTCGCAGCGTTCAACGGCGCTGCCTT CGCTCAAAAAAAATACGACACCGGCGCCTCCGATACCGAGATCAAGATCGGCAACATCATGCCCTATTCGGGCCCGGCCT CGGCCTACGGCACGATCGGCAAGACCGAAGAAGCCTACTTCCGGATGGTGAACGAGAACGGCGGCATCAACGGCCGCAAG GTCAACTTCATCAGCTATGACGACGCCTATTCGCCGCCGAAGGCGGTCGAACAGGTCCGCAAGCTGGTCGAGAGCGACGA AGTGCTGGCGGTGTTCAACCCGCTCGGCACGCCGTCCAACACCGCGGTCCAGAAATATCTCAACGCCAAGAAAGTGCCGC AACTGTTCGTCGCCACCGGCGCCACCAAGTGGAACGATTCGAAGAACTTCCCCTGGACGATCGGCTGGCAGCCGTCCTAC CAGAGCGAAGCGCAGATCTACGCCAAGTACCTGCTGAAAGAGAAGCCGGACGCCAAAATCGGCATCCTCTATCAGAACGA CGATTTCGGCAAAGACTATCTGAAGGGCACCAAGGACGGCCTCGGCGCCAAGGCCGCCTCGATGATCATCGCCGAAGAGA GCTACGAGATCTCGGCGCCGACCATCGACAGCAACGTCGTCAAGCTGAAGTCGGCCAATCCCGACGTCGTGCTGGTCTAC ACCACGCCGAAATTCGCCGCGCAGACCATCAAGAAGATCGCCGAACTGAGCTGGAAGCCGCTGGTGATCCTCACCAACGT CTCGGCCTCGGTCGGCAGCGTGATGCAGCCCGCCGGCTTCGAAAACGCCCAGGGCGTGCTGTCGGCGAACTACGCGAAGG ACCCGACCGACCAGCAGTGGGACAGCGATCCGAAGTTCAAAAAGTGGCACGCCTTCGTCGAGAAATACATGCCGGGCTCC AACAAGAACGACAGCAACATGGTCTACGGCTACGGCGCCGCCCAGACGCTGCACAAGGTGCTGGAGATGTGCGGCGACGA CCTGACCCGCGCCAATTTGATGAAGCAGGCCGCCAGCCTCAAGGACTTCGAGCCGGACACCCTGTTGCCCGGCGTCAAGA TCAATACCTCGGCGACCGACTTCGCGCCGATCAGCCAACTCCAGATGATGCGCTTCAAGGGCGACAGGTGGGAGCTGTTC GGCGAGATCATCTCCGGCGACATCACCCAGTAA
Upstream 100 bases:
>100_bases TCGGGCGACTCTTGCTGCACGCGCGAGAAACGTGTTCAATTCGTTTCGAACTCAACGAAGTTCGAACAAGAAAAAACCCA CGACCAAGGAGCCTTCTGCA
Downstream 100 bases:
>100_bases GGCATCGGCGTCCGGCCCCGATCCGGACGCCTTCCGATCCGAACGATCACCCCGGCAACCTGGTTGCCGGGGTTTTTGTT TGCCGGTTTGCGCCAGGCCG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MPTSPSRALVFSAAVAVSLAAFNGAAFAQKKYDTGASDTEIKIGNIMPYSGPASAYGTIGKTEEAYFRMVNENGGINGRK VNFISYDDAYSPPKAVEQVRKLVESDEVLAVFNPLGTPSNTAVQKYLNAKKVPQLFVATGATKWNDSKNFPWTIGWQPSY QSEAQIYAKYLLKEKPDAKIGILYQNDDFGKDYLKGTKDGLGAKAASMIIAEESYEISAPTIDSNVVKLKSANPDVVLVY TTPKFAAQTIKKIAELSWKPLVILTNVSASVGSVMQPAGFENAQGVLSANYAKDPTDQQWDSDPKFKKWHAFVEKYMPGS NKNDSNMVYGYGAAQTLHKVLEMCGDDLTRANLMKQAASLKDFEPDTLLPGVKINTSATDFAPISQLQMMRFKGDRWELF GEIISGDITQ
Sequences:
>Translated_410_residues MPTSPSRALVFSAAVAVSLAAFNGAAFAQKKYDTGASDTEIKIGNIMPYSGPASAYGTIGKTEEAYFRMVNENGGINGRK VNFISYDDAYSPPKAVEQVRKLVESDEVLAVFNPLGTPSNTAVQKYLNAKKVPQLFVATGATKWNDSKNFPWTIGWQPSY QSEAQIYAKYLLKEKPDAKIGILYQNDDFGKDYLKGTKDGLGAKAASMIIAEESYEISAPTIDSNVVKLKSANPDVVLVY TTPKFAAQTIKKIAELSWKPLVILTNVSASVGSVMQPAGFENAQGVLSANYAKDPTDQQWDSDPKFKKWHAFVEKYMPGS NKNDSNMVYGYGAAQTLHKVLEMCGDDLTRANLMKQAASLKDFEPDTLLPGVKINTSATDFAPISQLQMMRFKGDRWELF GEIISGDITQ >Mature_409_residues PTSPSRALVFSAAVAVSLAAFNGAAFAQKKYDTGASDTEIKIGNIMPYSGPASAYGTIGKTEEAYFRMVNENGGINGRKV NFISYDDAYSPPKAVEQVRKLVESDEVLAVFNPLGTPSNTAVQKYLNAKKVPQLFVATGATKWNDSKNFPWTIGWQPSYQ SEAQIYAKYLLKEKPDAKIGILYQNDDFGKDYLKGTKDGLGAKAASMIIAEESYEISAPTIDSNVVKLKSANPDVVLVYT TPKFAAQTIKKIAELSWKPLVILTNVSASVGSVMQPAGFENAQGVLSANYAKDPTDQQWDSDPKFKKWHAFVEKYMPGSN KNDSNMVYGYGAAQTLHKVLEMCGDDLTRANLMKQAASLKDFEPDTLLPGVKINTSATDFAPISQLQMMRFKGDRWELFG EIISGDITQ
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 44840; Mature: 44709
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSPSRALVFSAAVAVSLAAFNGAAFAQKKYDTGASDTEIKIGNIMPYSGPASAYGTIG CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC KTEEAYFRMVNENGGINGRKVNFISYDDAYSPPKAVEQVRKLVESDEVLAVFNPLGTPSN CCHHHHHEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCH TAVQKYLNAKKVPQLFVATGATKWNDSKNFPWTIGWQPSYQSEAQIYAKYLLKEKPDAKI HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEE GILYQNDDFGKDYLKGTKDGLGAKAASMIIAEESYEISAPTIDSNVVKLKSANPDVVLVY EEEEECCCCCHHHHCCCCCCCCHHHHHEEEEECCCEECCCCCCCCEEEEECCCCCEEEEE TTPKFAAQTIKKIAELSWKPLVILTNVSASVGSVMQPAGFENAQGVLSANYAKDPTDQQW ECCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCC DSDPKFKKWHAFVEKYMPGSNKNDSNMVYGYGAAQTLHKVLEMCGDDLTRANLMKQAASL CCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHC KDFEPDTLLPGVKINTSATDFAPISQLQMMRFKGDRWELFGEIISGDITQ CCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCC >Mature Secondary Structure PTSPSRALVFSAAVAVSLAAFNGAAFAQKKYDTGASDTEIKIGNIMPYSGPASAYGTIG CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC KTEEAYFRMVNENGGINGRKVNFISYDDAYSPPKAVEQVRKLVESDEVLAVFNPLGTPSN CCHHHHHEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCH TAVQKYLNAKKVPQLFVATGATKWNDSKNFPWTIGWQPSYQSEAQIYAKYLLKEKPDAKI HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEE GILYQNDDFGKDYLKGTKDGLGAKAASMIIAEESYEISAPTIDSNVVKLKSANPDVVLVY EEEEECCCCCHHHHCCCCCCCCHHHHHEEEEECCCEECCCCCCCCEEEEECCCCCEEEEE TTPKFAAQTIKKIAELSWKPLVILTNVSASVGSVMQPAGFENAQGVLSANYAKDPTDQQW ECCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCC DSDPKFKKWHAFVEKYMPGSNKNDSNMVYGYGAAQTLHKVLEMCGDDLTRANLMKQAASL CCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHC KDFEPDTLLPGVKINTSATDFAPISQLQMMRFKGDRWELFGEIISGDITQ CCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA