| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is zntB [H]
Identifier: 86748859
GI number: 86748859
Start: 1982766
End: 1983758
Strand: Reverse
Name: zntB [H]
Synonym: RPB_1736
Alternate gene names: 86748859
Gene position: 1983758-1982766 (Counterclockwise)
Preceding gene: 86748861
Following gene: 86748858
Centisome position: 37.21
GC content: 66.87
Gene sequence:
>993_bases ATGACCGATGCCCCTCGCTGCGATCCCGCGATCCCCGGACTGGTCTGGGGATTCAGCTTCGGTCCTGACGGAACCCCGCA ATCGCTGCCGGACGACGCACCGCTCGGCTTCGAGCGCCACGGTCGTTACTGGCTGCATTTCAACCTCGCCGATTCCCGTG CGCACCAATCGCTCGCCGAAATCGAGCTGCCCGCGCCGGTGCGGACGCTGCTGCAATCCAGGGACACCTATCAGCAGATG CACAGCCTCGACGGCTGCGTCTACGGCGTGATCGCCGATCTGATGCGCGACATCGCCGACGTCACCGAGGACACCGGCTT CCTGCGCTTCGTGATGACCGAGCAGCTGCTGATTACGGCCCGCTATCAGGCTCTGTGCGCGGTCGACACCGCCCGGCGTG CGCTCGAACGCGGGCATCGGGTCGAAAGCTGTGCGGCGCTGTTCGAAATGATCGTCCACAACGTCGCCGACGCGATGGAG AAGATCGCCGACGACGTCTTCGAGACCCTCGACAAGATCGAGGAGAAGCTGCTGTCGGACGACACCGACGATTTGCGCCA GGGGCTCGGGCGGGTGCGGCGGACCTGCGTCCGGCTGCACCGCCACCTGTCCGGCCTGCGCATCGTGCTGCACCGATTCG ACCGCAACGACAGCGCCGACCTCGCGCCGGCGCTGCGGCCGCGCGCCGGCAAGCTGGCGCAACGGCTCGACGGGCTCGAC CATTCGGTGGTCGAGATGCGCGAGCGCAGCCGGCTGCTGCAGGAGGAGCTGCATCTGAAGATCGAGGAACAGGGCAATGG CAACCTGCGGGTGCTGTCGATGCTCACCGCGCTGCTGATGCCGCCGACGCTGGTCAGCGGCATGTTCGGCATGAACCTGC GCGGGCTGCCGTTCGCCGAAGGCGACGGCGGGTTCGTCCTGGCGTTGCTGGCGATGGCGATGTCGTCGTTCGGGGCCTGG CTGTTGATGAAGCGTATCGGCCTGATCAGGTAG
Upstream 100 bases:
>100_bases GCCCACGAGCGCGATCGGCGTCGCGCAAACGCCAGTGTCGGCCGTCGGGTCGGGGCCGGCCGGTGCGTGCTGACGAGCGC GCGATCCGGCGCCGATTTCC
Downstream 100 bases:
>100_bases CCAGGGCATGCTTCCGATCATCACGAAAACGCCGCGGATAGCGGCCTGCGTGATCGCATTGCTGGGGCTGGGGCTGCACG CCACCAGCAGCGTGGCGGAA
Product: Mg2+ transporter protein, CorA-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTDAPRCDPAIPGLVWGFSFGPDGTPQSLPDDAPLGFERHGRYWLHFNLADSRAHQSLAEIELPAPVRTLLQSRDTYQQM HSLDGCVYGVIADLMRDIADVTEDTGFLRFVMTEQLLITARYQALCAVDTARRALERGHRVESCAALFEMIVHNVADAME KIADDVFETLDKIEEKLLSDDTDDLRQGLGRVRRTCVRLHRHLSGLRIVLHRFDRNDSADLAPALRPRAGKLAQRLDGLD HSVVEMRERSRLLQEELHLKIEEQGNGNLRVLSMLTALLMPPTLVSGMFGMNLRGLPFAEGDGGFVLALLAMAMSSFGAW LLMKRIGLIR
Sequences:
>Translated_330_residues MTDAPRCDPAIPGLVWGFSFGPDGTPQSLPDDAPLGFERHGRYWLHFNLADSRAHQSLAEIELPAPVRTLLQSRDTYQQM HSLDGCVYGVIADLMRDIADVTEDTGFLRFVMTEQLLITARYQALCAVDTARRALERGHRVESCAALFEMIVHNVADAME KIADDVFETLDKIEEKLLSDDTDDLRQGLGRVRRTCVRLHRHLSGLRIVLHRFDRNDSADLAPALRPRAGKLAQRLDGLD HSVVEMRERSRLLQEELHLKIEEQGNGNLRVLSMLTALLMPPTLVSGMFGMNLRGLPFAEGDGGFVLALLAMAMSSFGAW LLMKRIGLIR >Mature_329_residues TDAPRCDPAIPGLVWGFSFGPDGTPQSLPDDAPLGFERHGRYWLHFNLADSRAHQSLAEIELPAPVRTLLQSRDTYQQMH SLDGCVYGVIADLMRDIADVTEDTGFLRFVMTEQLLITARYQALCAVDTARRALERGHRVESCAALFEMIVHNVADAMEK IADDVFETLDKIEEKLLSDDTDDLRQGLGRVRRTCVRLHRHLSGLRIVLHRFDRNDSADLAPALRPRAGKLAQRLDGLDH SVVEMRERSRLLQEELHLKIEEQGNGNLRVLSMLTALLMPPTLVSGMFGMNLRGLPFAEGDGGFVLALLAMAMSSFGAWL LMKRIGLIR
Specific function: Mediates efflux of zinc ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=282, Percent_Identity=22.3404255319149, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 36939; Mature: 36808
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAPRCDPAIPGLVWGFSFGPDGTPQSLPDDAPLGFERHGRYWLHFNLADSRAHQSLAE CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCHHHHHHHHHH IELPAPVRTLLQSRDTYQQMHSLDGCVYGVIADLMRDIADVTEDTGFLRFVMTEQLLITA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RYQALCAVDTARRALERGHRVESCAALFEMIVHNVADAMEKIADDVFETLDKIEEKLLSD HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DTDDLRQGLGRVRRTCVRLHRHLSGLRIVLHRFDRNDSADLAPALRPRAGKLAQRLDGLD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHCCCC HSVVEMRERSRLLQEELHLKIEEQGNGNLRVLSMLTALLMPPTLVSGMFGMNLRGLPFAE HHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC GDGGFVLALLAMAMSSFGAWLLMKRIGLIR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDAPRCDPAIPGLVWGFSFGPDGTPQSLPDDAPLGFERHGRYWLHFNLADSRAHQSLAE CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCHHHHHHHHHH IELPAPVRTLLQSRDTYQQMHSLDGCVYGVIADLMRDIADVTEDTGFLRFVMTEQLLITA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RYQALCAVDTARRALERGHRVESCAALFEMIVHNVADAMEKIADDVFETLDKIEEKLLSD HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DTDDLRQGLGRVRRTCVRLHRHLSGLRIVLHRFDRNDSADLAPALRPRAGKLAQRLDGLD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHCCCC HSVVEMRERSRLLQEELHLKIEEQGNGNLRVLSMLTALLMPPTLVSGMFGMNLRGLPFAE HHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC GDGGFVLALLAMAMSSFGAWLLMKRIGLIR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA