| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86748223
Identifier: 86748223
GI number: 86748223
Start: 1260494
End: 1260649
Strand: Direct
Name: 86748223
Synonym: RPB_1098
Alternate gene names: NA
Gene position: 1260494-1260649 (Clockwise)
Preceding gene: 86748221
Following gene: 86748224
Centisome position: 23.64
GC content: 59.62
Gene sequence:
>156_bases ATGACAATCACCGCTGCCCACATTCCCGCCATCGTCGCGCTGATCGCCGGTATCCTGATTCTGGTGATGCCGCGGTTGCT CAACATCGTCGTGGCGATCTACCTGATCTGCGTCGGACTGATCGGTCTGGGGGCGCTTCGCTTCCTGCACCTTTAG
Upstream 100 bases:
>100_bases TGGCTTCGGCGTCATCAGGCGCCTGTATCGCTCGATGCACCCGCCGGCTACAAACCCGCTTGCGATTCGGTCGCGATTCT CTCATCCGGAGACAACTGCC
Downstream 100 bases:
>100_bases TCGGCGGGAGAGCGGCCAGCTTGCTTGCAACCGCCAAAACGTGGTGTATAGCGGCCCAATCTCTTCCCCTCTCGCGGACC GTTGACAGCCATGGCCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MTITAAHIPAIVALIAGILILVMPRLLNIVVAIYLICVGLIGLGALRFLHL
Sequences:
>Translated_51_residues MTITAAHIPAIVALIAGILILVMPRLLNIVVAIYLICVGLIGLGALRFLHL >Mature_50_residues TITAAHIPAIVALIAGILILVMPRLLNIVVAIYLICVGLIGLGALRFLHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5389; Mature: 5258
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITAAHIPAIVALIAGILILVMPRLLNIVVAIYLICVGLIGLGALRFLHL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TITAAHIPAIVALIAGILILVMPRLLNIVVAIYLICVGLIGLGALRFLHL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA