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The map label for this gene is 86748161

Identifier: 86748161

GI number: 86748161

Start: 1190045

End: 1190902

Strand: Reverse

Name: 86748161

Synonym: RPB_1036

Alternate gene names: NA

Gene position: 1190902-1190045 (Counterclockwise)

Preceding gene: 86748163

Following gene: 86748160

Centisome position: 22.34

GC content: 71.1

Gene sequence:

>858_bases
GTGTCACTGCAATATGTCATCGGAATCGATCACGCCGTGGTCATGGTCGGCGATCTGGATGCGGCCGCGGCCAATTGGCA
GCGGCTCGGCTTCACGCTGTCGCCGCGCGGCACCCACAGCCCGGCGCTCGGCTCCGGCAATTACACCATCATGTTCGGGC
AGGACTATATCGAGCTGCTCGGCATCCTGGCCCCGACCGAGCACAATGCGCCGAGCCGCGCCTTCCTCGCCGAACGCGGC
GACGGCATCGAGCGGATCGCCTTCACCACCACCGACGCCGCCAAGGGCGCCGACGAACTGCGCGACCTCGGCCTCGATGC
GGTCGGCCCGATCGATTTCGGCCGGCCGGTGCCGCTGCCGGGCGGCGGCGAAGGCGAGGCGCGCTTCAGCGTGTTCCAAT
GGCCGCTGCAGGAGGCGCCCGCCGGGCTGCGGATCTTCGCCTGCCAGCACCACACCCGCGATACCGTGTGGATTCCCGAA
CTGCAGCGCCACGCCAACGGCGCGACCGGGCTGGTGCGGGTGATCGTCACCGCGCCGCGGCCGGAGAGCGACGCCCGGCA
CCTGCTGCGGCTGATCGACGGCGAGCAGTTTTCCGAGCCCGACGGCAGCGTCGTGGTGCCGTCCGGATCGGACCGCGCCG
AATTCGCCTTCGTGGCGCGTGATGTGCTGGCGCAGCACTATCCCGGCGTGGCGCTGGACGGCGTGCCGGAACGCGGCGGC
GCCGGCCTGATCATCGCGGTGAACGACCTCGCCGCCTCCGAACAGGCGATCGGCGCCGCCGGCGTCAAGATCGGCGATCG
TCTGGTGGTGCCGCCGCGCGCGGCCAACGGCGTGCTGCTGGTGTTCGTGGCGCGCTGA

Upstream 100 bases:

>100_bases
TATCGATTTCAATCGCCCCCACCTCCGACATGCGTCGGGTTGCGGCGCCGCGGCGATGTCGCTAGCCTTATATGCAAGAA
TTTTGGGGAGTTGAGCCAGC

Downstream 100 bases:

>100_bases
CGCGCCACGGAGTTTTGCAGGAACCTTTTCCCGGTCGGACACGTTTTCGCGCCGTCGAGTCTGCTCGACGGTCTGAAGCG
TGCGAGCGCCCCGCCAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSLQYVIGIDHAVVMVGDLDAAAANWQRLGFTLSPRGTHSPALGSGNYTIMFGQDYIELLGILAPTEHNAPSRAFLAERG
DGIERIAFTTTDAAKGADELRDLGLDAVGPIDFGRPVPLPGGGEGEARFSVFQWPLQEAPAGLRIFACQHHTRDTVWIPE
LQRHANGATGLVRVIVTAPRPESDARHLLRLIDGEQFSEPDGSVVVPSGSDRAEFAFVARDVLAQHYPGVALDGVPERGG
AGLIIAVNDLAASEQAIGAAGVKIGDRLVVPPRAANGVLLVFVAR

Sequences:

>Translated_285_residues
MSLQYVIGIDHAVVMVGDLDAAAANWQRLGFTLSPRGTHSPALGSGNYTIMFGQDYIELLGILAPTEHNAPSRAFLAERG
DGIERIAFTTTDAAKGADELRDLGLDAVGPIDFGRPVPLPGGGEGEARFSVFQWPLQEAPAGLRIFACQHHTRDTVWIPE
LQRHANGATGLVRVIVTAPRPESDARHLLRLIDGEQFSEPDGSVVVPSGSDRAEFAFVARDVLAQHYPGVALDGVPERGG
AGLIIAVNDLAASEQAIGAAGVKIGDRLVVPPRAANGVLLVFVAR
>Mature_284_residues
SLQYVIGIDHAVVMVGDLDAAAANWQRLGFTLSPRGTHSPALGSGNYTIMFGQDYIELLGILAPTEHNAPSRAFLAERGD
GIERIAFTTTDAAKGADELRDLGLDAVGPIDFGRPVPLPGGGEGEARFSVFQWPLQEAPAGLRIFACQHHTRDTVWIPEL
QRHANGATGLVRVIVTAPRPESDARHLLRLIDGEQFSEPDGSVVVPSGSDRAEFAFVARDVLAQHYPGVALDGVPERGGA
GLIIAVNDLAASEQAIGAAGVKIGDRLVVPPRAANGVLLVFVAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30145; Mature: 30014

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQYVIGIDHAVVMVGDLDAAAANWQRLGFTLSPRGTHSPALGSGNYTIMFGQDYIELL
CCEEEEEECCEEEEEEECCCHHHCCHHHCCEEECCCCCCCCCCCCCCEEEEECCHHHHHH
GILAPTEHNAPSRAFLAERGDGIERIAFTTTDAAKGADELRDLGLDAVGPIDFGRPVPLP
HHCCCCCCCCCCHHHHHHCCCCCEEEEEEECHHHCCHHHHHHCCCCCCCCCCCCCCCCCC
GGGEGEARFSVFQWPLQEAPAGLRIFACQHHTRDTVWIPELQRHANGATGLVRVIVTAPR
CCCCCCEEEEEEECCHHHCCCCEEEEEECCCCCCEEECHHHHHHCCCCCEEEEEEEECCC
PESDARHLLRLIDGEQFSEPDGSVVVPSGSDRAEFAFVARDVLAQHYPGVALDGVPERGG
CCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCC
AGLIIAVNDLAASEQAIGAAGVKIGDRLVVPPRAANGVLLVFVAR
CEEEEEECCCCCCHHHHCCCCCEECCEEEECCCCCCCEEEEEEEC
>Mature Secondary Structure 
SLQYVIGIDHAVVMVGDLDAAAANWQRLGFTLSPRGTHSPALGSGNYTIMFGQDYIELL
CEEEEEECCEEEEEEECCCHHHCCHHHCCEEECCCCCCCCCCCCCCEEEEECCHHHHHH
GILAPTEHNAPSRAFLAERGDGIERIAFTTTDAAKGADELRDLGLDAVGPIDFGRPVPLP
HHCCCCCCCCCCHHHHHHCCCCCEEEEEEECHHHCCHHHHHHCCCCCCCCCCCCCCCCCC
GGGEGEARFSVFQWPLQEAPAGLRIFACQHHTRDTVWIPELQRHANGATGLVRVIVTAPR
CCCCCCEEEEEEECCHHHCCCCEEEEEECCCCCCEEECHHHHHHCCCCCEEEEEEEECCC
PESDARHLLRLIDGEQFSEPDGSVVVPSGSDRAEFAFVARDVLAQHYPGVALDGVPERGG
CCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCC
AGLIIAVNDLAASEQAIGAAGVKIGDRLVVPPRAANGVLLVFVAR
CEEEEEECCCCCCHHHHCCCCCEECCEEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA