Click here to switch to the map view.

The map label for this gene is mcpA [H]

Identifier: 86748155

GI number: 86748155

Start: 1182159

End: 1184120

Strand: Reverse

Name: mcpA [H]

Synonym: RPB_1030

Alternate gene names: 86748155

Gene position: 1184120-1182159 (Counterclockwise)

Preceding gene: 86748158

Following gene: 86748154

Centisome position: 22.21

GC content: 69.32

Gene sequence:

>1962_bases
ATGAGTCTTCGTACGCGCATCACGCTCGCTTTGATCGCCGCTTCGGTGCTGACCGCGGCCGTCCTGCTGATCGGATCGAT
CACCACCATCAGCGACATCATCCGCCGCGCCGACGACCGCGAACTACGCGGCCACTACGATGCGGTGATCTCACAGCTCG
CGCAGGAGGCCCGGCAGGCGGCGGCGATGAGCGCCGTCGTCGCCGCGATGCCGGCTGCGCAGCAGGCTCTGGCGCGTCGC
GACCGCCAGGGGTTGTTCGACCTCTTCCTGGCGGGCTTTCCGTTTCTCAAGTCGCAATACGGCGTCGATCAGTTCCAGTT
CCACGTTCCGCCGGCGACGTCGTTCGCCCGCATCCACCAGGCCCAGAAATTCGGCGACGACCTGTCGGGCTTCCGCAAGA
CGGTGGTCGAGGCCAATCGCGACCGCAAGGCGATCGTCGGTCTGGAGTCGGGCGTCGCCGGACTCGGCATCCGCGGCGTG
GTGCCGGTGGCGCACGACGGCAAACATGCCGGCACGGTCGAATTCGGCCTGACCTTCGGCCAGGGCTTCTTCGACAAGTT
CAAGCAGGAGCGGGGCGTCGATGTCGCCCTGCATCTGAGCAAGCCCGACGGCTCGGTCGCCGCGCCAGTCGGCACGATCC
GCGGCCCGAGCTTCTTCACCCCCGCCGAGATCCGGAAGTCCGCGGGCGGCGCGGTGACGACCCGTCAGGCCGACGACGCC
AGCGGCAAGCCGATGGCGATGCTGCTCGGCCCGGTCAAGGACTTCTCCGGCCATCCGATCGGCGCGCTCGAAATCGCGAT
GGACAACAGCGAATATGCCGCCGCCACCAGCAACGCCTATCTGCTCGCCATCCTCGCCTCGGTGGGAGCCCTGGTGCTGG
CCGCGATCACCGGCTTCATCATCGCCGGCGGCATCTCGCGGCCGATCCTGTCGCTGTGCGAGGCGATGCGCGGCCTCGCC
GGCGGCGATCTGTCGATTGCGCTGCCGCCGCTGAAACGAAAGGACGAGGTCGGCCAGATGATCGACGCGGTCGGCGTCTT
CCGCGAGAGCATGATCGAAACCGAGCGGCTGCGCGCCGATCAGGCCGAAGCGGCGCGGCGGCAGGCGGCACAGCGCCGCG
ACGAGATGCACGGCCTCGCCGAGTCGTTCGAGGCGGCGGTCGGCCGCATCGTCGAGACGGTGTCGTCGGCCTCGACCGAA
CTCGAAGCCTCCGCCGGCGCGCTGACCGCCACCGCCGACCGCTCGCTCGACATCGCCACCGCGGTCGCGGCGGCGTCGGA
GGAAGCGTCCACCAACGTCCAATCGGTCGCCTCCGCCACCGAGGAGATGACCTCGTCGGTCGGCGAGATCGGCCGCCAGG
TCCGGGAATCGGCGCAGATCGCCCGCGACGCGGTGAGCCAGGCCGAGACCACCAACGCCCACGTCGCCGAACTGTCGCGC
GCCGCCGCACAGATCGAATCCGTCGTCGAGCTGATCAACAAGATCGCCGGCCAGACCAATCTGCTGGCGCTCAACGCCAC
CATCGAGGCGGCGCGCGCCGGCGAGGCCGGCCGCGGCTTCGCCGTGGTCGCCGCCGAGGTCAAGGCGCTGGCCGAGCAGA
CCGCGACCGCCACCAGCGACATCGCCCGCTACGTCGGCAGCATCCAGAGCGCGACCGGCGAGTCGGTGGCGTCGATCGGT
TCGATCGGCCAGACCATCAACCGGCTGTCGGAGATCGCGGCCGCGATCGCGTCGGCGGTCGAACAGCAGGGCGTCGCCAC
CAGGGAAATCTCGCGCAATGTCCACCACGCCGCCGAGGGCACCCATCAGGTCACCGTCAACATCGCCGAGGTTCAGCGCG
GCGCCACCGAGACCGAACTCGCCTCCACCAGCGTGCTGGCGGCGGCGCATTCGCTGTCGGAAGAGAGCAACGCCCTGAAA
AAGGAAGTCGAGCACTTCCTGCATTCGATCCGCGCCGCCTGA

Upstream 100 bases:

>100_bases
GCTCATTCCCTGACCCTTTTGGCACGCCCGCACCGTCACCAGCCTCCCCACCGGGAGCACTGGATTGCCGAAGGCTGCGG
CGCAATCAGGAATCGCCGTC

Downstream 100 bases:

>100_bases
GGCGCCGCCCCCGCCCGCCGGCATGGCGGCGCCGCTTCCGTGTCGCTTCCCGCGGCCCGGATCGCTTGCTACAACGCGCC
ATGCCCGACGCTTCCAGTGA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 653; Mature: 652

Protein sequence:

>653_residues
MSLRTRITLALIAASVLTAAVLLIGSITTISDIIRRADDRELRGHYDAVISQLAQEARQAAAMSAVVAAMPAAQQALARR
DRQGLFDLFLAGFPFLKSQYGVDQFQFHVPPATSFARIHQAQKFGDDLSGFRKTVVEANRDRKAIVGLESGVAGLGIRGV
VPVAHDGKHAGTVEFGLTFGQGFFDKFKQERGVDVALHLSKPDGSVAAPVGTIRGPSFFTPAEIRKSAGGAVTTRQADDA
SGKPMAMLLGPVKDFSGHPIGALEIAMDNSEYAAATSNAYLLAILASVGALVLAAITGFIIAGGISRPILSLCEAMRGLA
GGDLSIALPPLKRKDEVGQMIDAVGVFRESMIETERLRADQAEAARRQAAQRRDEMHGLAESFEAAVGRIVETVSSASTE
LEASAGALTATADRSLDIATAVAAASEEASTNVQSVASATEEMTSSVGEIGRQVRESAQIARDAVSQAETTNAHVAELSR
AAAQIESVVELINKIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKALAEQTATATSDIARYVGSIQSATGESVASIG
SIGQTINRLSEIAAAIASAVEQQGVATREISRNVHHAAEGTHQVTVNIAEVQRGATETELASTSVLAAAHSLSEESNALK
KEVEHFLHSIRAA

Sequences:

>Translated_653_residues
MSLRTRITLALIAASVLTAAVLLIGSITTISDIIRRADDRELRGHYDAVISQLAQEARQAAAMSAVVAAMPAAQQALARR
DRQGLFDLFLAGFPFLKSQYGVDQFQFHVPPATSFARIHQAQKFGDDLSGFRKTVVEANRDRKAIVGLESGVAGLGIRGV
VPVAHDGKHAGTVEFGLTFGQGFFDKFKQERGVDVALHLSKPDGSVAAPVGTIRGPSFFTPAEIRKSAGGAVTTRQADDA
SGKPMAMLLGPVKDFSGHPIGALEIAMDNSEYAAATSNAYLLAILASVGALVLAAITGFIIAGGISRPILSLCEAMRGLA
GGDLSIALPPLKRKDEVGQMIDAVGVFRESMIETERLRADQAEAARRQAAQRRDEMHGLAESFEAAVGRIVETVSSASTE
LEASAGALTATADRSLDIATAVAAASEEASTNVQSVASATEEMTSSVGEIGRQVRESAQIARDAVSQAETTNAHVAELSR
AAAQIESVVELINKIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKALAEQTATATSDIARYVGSIQSATGESVASIG
SIGQTINRLSEIAAAIASAVEQQGVATREISRNVHHAAEGTHQVTVNIAEVQRGATETELASTSVLAAAHSLSEESNALK
KEVEHFLHSIRAA
>Mature_652_residues
SLRTRITLALIAASVLTAAVLLIGSITTISDIIRRADDRELRGHYDAVISQLAQEARQAAAMSAVVAAMPAAQQALARRD
RQGLFDLFLAGFPFLKSQYGVDQFQFHVPPATSFARIHQAQKFGDDLSGFRKTVVEANRDRKAIVGLESGVAGLGIRGVV
PVAHDGKHAGTVEFGLTFGQGFFDKFKQERGVDVALHLSKPDGSVAAPVGTIRGPSFFTPAEIRKSAGGAVTTRQADDAS
GKPMAMLLGPVKDFSGHPIGALEIAMDNSEYAAATSNAYLLAILASVGALVLAAITGFIIAGGISRPILSLCEAMRGLAG
GDLSIALPPLKRKDEVGQMIDAVGVFRESMIETERLRADQAEAARRQAAQRRDEMHGLAESFEAAVGRIVETVSSASTEL
EASAGALTATADRSLDIATAVAAASEEASTNVQSVASATEEMTSSVGEIGRQVRESAQIARDAVSQAETTNAHVAELSRA
AAQIESVVELINKIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKALAEQTATATSDIARYVGSIQSATGESVASIGS
IGQTINRLSEIAAAIASAVEQQGVATREISRNVHHAAEGTHQVTVNIAEVQRGATETELASTSVLAAAHSLSEESNALKK
EVEHFLHSIRAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Note=Localized at the flagellum-bearing pole of the swarmer cell [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=422, Percent_Identity=26.7772511848341, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788194, Length=208, Percent_Identity=32.2115384615385, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1787690, Length=381, Percent_Identity=27.5590551181102, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1788195, Length=255, Percent_Identity=29.0196078431373, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1789453, Length=69, Percent_Identity=52.1739130434783, Blast_Score=73, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 68082; Mature: 67950

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRTRITLALIAASVLTAAVLLIGSITTISDIIRRADDRELRGHYDAVISQLAQEARQA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AAMSAVVAAMPAAQQALARRDRQGLFDLFLAGFPFLKSQYGVDQFQFHVPPATSFARIHQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCHHHHHHHH
AQKFGDDLSGFRKTVVEANRDRKAIVGLESGVAGLGIRGVVPVAHDGKHAGTVEFGLTFG
HHHHCHHHHHHHHHHHHCCCCCCEEEEHHCCCCCCCCCCCEECCCCCCCCCEEEECCHHC
QGFFDKFKQERGVDVALHLSKPDGSVAAPVGTIRGPSFFTPAEIRKSAGGAVTTRQADDA
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEECCCCCC
SGKPMAMLLGPVKDFSGHPIGALEIAMDNSEYAAATSNAYLLAILASVGALVLAAITGFI
CCCCHHHHCCCHHCCCCCCCCEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IAGGISRPILSLCEAMRGLAGGDLSIALPPLKRKDEVGQMIDAVGVFRESMIETERLRAD
HHCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEAARRQAAQRRDEMHGLAESFEAAVGRIVETVSSASTELEASAGALTATADRSLDIAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHH
AVAAASEEASTNVQSVASATEEMTSSVGEIGRQVRESAQIARDAVSQAETTNAHVAELSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AAAQIESVVELINKIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKALAEQTATATSD
HHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IARYVGSIQSATGESVASIGSIGQTINRLSEIAAAIASAVEQQGVATREISRNVHHAAEG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
THQVTVNIAEVQRGATETELASTSVLAAAHSLSEESNALKKEVEHFLHSIRAA
CEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLRTRITLALIAASVLTAAVLLIGSITTISDIIRRADDRELRGHYDAVISQLAQEARQA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AAMSAVVAAMPAAQQALARRDRQGLFDLFLAGFPFLKSQYGVDQFQFHVPPATSFARIHQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCHHHHHHHH
AQKFGDDLSGFRKTVVEANRDRKAIVGLESGVAGLGIRGVVPVAHDGKHAGTVEFGLTFG
HHHHCHHHHHHHHHHHHCCCCCCEEEEHHCCCCCCCCCCCEECCCCCCCCCEEEECCHHC
QGFFDKFKQERGVDVALHLSKPDGSVAAPVGTIRGPSFFTPAEIRKSAGGAVTTRQADDA
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEECCCCCC
SGKPMAMLLGPVKDFSGHPIGALEIAMDNSEYAAATSNAYLLAILASVGALVLAAITGFI
CCCCHHHHCCCHHCCCCCCCCEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IAGGISRPILSLCEAMRGLAGGDLSIALPPLKRKDEVGQMIDAVGVFRESMIETERLRAD
HHCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEAARRQAAQRRDEMHGLAESFEAAVGRIVETVSSASTELEASAGALTATADRSLDIAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHH
AVAAASEEASTNVQSVASATEEMTSSVGEIGRQVRESAQIARDAVSQAETTNAHVAELSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AAAQIESVVELINKIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKALAEQTATATSD
HHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IARYVGSIQSATGESVASIGSIGQTINRLSEIAAAIASAVEQQGVATREISRNVHHAAEG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
THQVTVNIAEVQRGATETELASTSVLAAAHSLSEESNALKKEVEHFLHSIRAA
CEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1577276; 11259647 [H]