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The map label for this gene is 86748131

Identifier: 86748131

GI number: 86748131

Start: 1151261

End: 1152781

Strand: Reverse

Name: 86748131

Synonym: RPB_1006

Alternate gene names: NA

Gene position: 1152781-1151261 (Counterclockwise)

Preceding gene: 86748132

Following gene: 86748129

Centisome position: 21.62

GC content: 70.22

Gene sequence:

>1521_bases
GTGATCGTTGAGCTCCGCGTCGACGCGCAGCGCCCGCGCCGATGGCTGCGCCATCTGATCGCGCTGCTCGCCGCCGATCG
GCACGAGGTCCAGATCGTCCCGGTGCGGACCGATGCGAGCCGGCCGGCGGGGCTCGAAGCGCTGCTCGAGATCGAACGAA
TGCTGCTGCGGCGCGGCCGGCCATGCGGCGCGGATGCCGATCCGGCGTTGACGAACGAACCTCGCCGGCCGCCGCAGCGC
GCCGACATCGTGATCGATTTCACCGCGATGCCGCGCGATCCGACCTGCGCGGCGCGGCTCTATCTGCGTCCGCTATACGA
GGGCGTTGCCGGCGAGGATGCGGCGCTCGCCGCCATTCTCGGCGACGATCTCCCGTTGATCGAGATCCTCGACGAGGTCA
GCGGCTCGATCGCCTGGTCCGGCAAGCCTTCGGCGGAGACTGCGGACGGCCTCGGCGGCGCGCTCGACGCCGTGATGGCG
CGGACCGCGACCTTGCTGAAAGGCGTGATCGACGCCGGCCCGCGCGCGACCGCGCCGCGCGGCTCGGTTCGACGGCGCAG
CCTGCGCACGCCCTCGGCCTATGTGCTGCGCGGCCTCGCGGCGCATCTCGTCCGGAGTATCTACCGGCTGTGCTGCTATT
CACCGCACTGGCGGATCGGATGGCGCCACACCGACGATGCCGGCATCTGGAATTCCGCCGACCTCTCCGGTCCGGCATGG
CGCGCGGTGCCGAGCCCCGGCCACCGGTTCTACGCCGATCCGTTTCCGATCACCTGGAAGGGCCGCACCTTCGTGTTCGT
CGAGGACCTCGACCATCGCGTCGGCAAAGGCACCATCGCGGCGATCGAGTTCGGCGACGACGGACCGATCGGCACGGCGA
TTCCGGTGCTCGAGGAGCCATGGCACCTGTCCTATCCGTTCCTGATCGTGCACGACGACGAATTGTGGATGATCCCCGAG
AGCAGTGCCCGGCACGAGGTGAATGTCTACCGATGCGTGCGGTTTCCGGATCGCTGGGAGCGGCACGCGACGCTGCTGTC
GGGCGTCGAACTCGCCGATGCGACGATCGTGCGGCACGACGGCCGGCACTACATGTTCGGCGCCACCCGCGACGGCGCCG
GCGGCTATTCGGACACGCTGTCGATCTATCACGCCGACGATCTGTTCGGACGATGGACGCCGCACGCGCAGCGGCCGGCG
CTGGTCGATCGCGCCAGCACGCGGCCGGCCGGCCATTTCGTGCAGCGCAACGGCCGGCTGTGGCGACCGGTGCAGGACTG
CACCAACGGCTATGGCGGCGCGCTCGGCCTCGCGGAGATCACCGCGCTGTCGCCGACGGATTTCGCGCAGACGGTGCACC
ACGTCATCAGCCCGGGGCCGCGCTGGCCGGGCCGCAAGCTGCACACGCTCAACCGCTGCGGGCGACTCGAACTGATCGAC
GGAACCATCATCCAGCCGAAGATCGAGGCGTTGCGGCTGCCCGATCGACTCGGCGCGCCGGTCGACGCGCGCGGCCGCTG
A

Upstream 100 bases:

>100_bases
GGGCTGAAGTCGCGCTACGCGGTCGACGCCATGGTCGACGAGTATGTCCGCATCATCGAGGGCGCAACGCAGCCGGCAGC
GCGACGGCAAGGAGCCGGCC

Downstream 100 bases:

>100_bases
AGCCGCCGACGCATCACCGCCGCGGCATCCACCGCACCGCAAGCCAGCCGGCGATCAGCCCGACCGTTCCGCCCGACAGT
TTCACCGCGGCATCGAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MIVELRVDAQRPRRWLRHLIALLAADRHEVQIVPVRTDASRPAGLEALLEIERMLLRRGRPCGADADPALTNEPRRPPQR
ADIVIDFTAMPRDPTCAARLYLRPLYEGVAGEDAALAAILGDDLPLIEILDEVSGSIAWSGKPSAETADGLGGALDAVMA
RTATLLKGVIDAGPRATAPRGSVRRRSLRTPSAYVLRGLAAHLVRSIYRLCCYSPHWRIGWRHTDDAGIWNSADLSGPAW
RAVPSPGHRFYADPFPITWKGRTFVFVEDLDHRVGKGTIAAIEFGDDGPIGTAIPVLEEPWHLSYPFLIVHDDELWMIPE
SSARHEVNVYRCVRFPDRWERHATLLSGVELADATIVRHDGRHYMFGATRDGAGGYSDTLSIYHADDLFGRWTPHAQRPA
LVDRASTRPAGHFVQRNGRLWRPVQDCTNGYGGALGLAEITALSPTDFAQTVHHVISPGPRWPGRKLHTLNRCGRLELID
GTIIQPKIEALRLPDRLGAPVDARGR

Sequences:

>Translated_506_residues
MIVELRVDAQRPRRWLRHLIALLAADRHEVQIVPVRTDASRPAGLEALLEIERMLLRRGRPCGADADPALTNEPRRPPQR
ADIVIDFTAMPRDPTCAARLYLRPLYEGVAGEDAALAAILGDDLPLIEILDEVSGSIAWSGKPSAETADGLGGALDAVMA
RTATLLKGVIDAGPRATAPRGSVRRRSLRTPSAYVLRGLAAHLVRSIYRLCCYSPHWRIGWRHTDDAGIWNSADLSGPAW
RAVPSPGHRFYADPFPITWKGRTFVFVEDLDHRVGKGTIAAIEFGDDGPIGTAIPVLEEPWHLSYPFLIVHDDELWMIPE
SSARHEVNVYRCVRFPDRWERHATLLSGVELADATIVRHDGRHYMFGATRDGAGGYSDTLSIYHADDLFGRWTPHAQRPA
LVDRASTRPAGHFVQRNGRLWRPVQDCTNGYGGALGLAEITALSPTDFAQTVHHVISPGPRWPGRKLHTLNRCGRLELID
GTIIQPKIEALRLPDRLGAPVDARGR
>Mature_506_residues
MIVELRVDAQRPRRWLRHLIALLAADRHEVQIVPVRTDASRPAGLEALLEIERMLLRRGRPCGADADPALTNEPRRPPQR
ADIVIDFTAMPRDPTCAARLYLRPLYEGVAGEDAALAAILGDDLPLIEILDEVSGSIAWSGKPSAETADGLGGALDAVMA
RTATLLKGVIDAGPRATAPRGSVRRRSLRTPSAYVLRGLAAHLVRSIYRLCCYSPHWRIGWRHTDDAGIWNSADLSGPAW
RAVPSPGHRFYADPFPITWKGRTFVFVEDLDHRVGKGTIAAIEFGDDGPIGTAIPVLEEPWHLSYPFLIVHDDELWMIPE
SSARHEVNVYRCVRFPDRWERHATLLSGVELADATIVRHDGRHYMFGATRDGAGGYSDTLSIYHADDLFGRWTPHAQRPA
LVDRASTRPAGHFVQRNGRLWRPVQDCTNGYGGALGLAEITALSPTDFAQTVHHVISPGPRWPGRKLHTLNRCGRLELID
GTIIQPKIEALRLPDRLGAPVDARGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55994; Mature: 55994

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVELRVDAQRPRRWLRHLIALLAADRHEVQIVPVRTDASRPAGLEALLEIERMLLRRGR
CEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC
PCGADADPALTNEPRRPPQRADIVIDFTAMPRDPTCAARLYLRPLYEGVAGEDAALAAIL
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEC
GDDLPLIEILDEVSGSIAWSGKPSAETADGLGGALDAVMARTATLLKGVIDAGPRATAPR
CCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GSVRRRSLRTPSAYVLRGLAAHLVRSIYRLCCYSPHWRIGWRHTDDAGIWNSADLSGPAW
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECEEECCCCCCCCCCCCCCCCE
RAVPSPGHRFYADPFPITWKGRTFVFVEDLDHRVGKGTIAAIEFGDDGPIGTAIPVLEEP
ECCCCCCCEEECCCCCEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
WHLSYPFLIVHDDELWMIPESSARHEVNVYRCVRFPDRWERHATLLSGVELADATIVRHD
CCCCCCEEEEECCCEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHCCHHHCEEEEEEC
GRHYMFGATRDGAGGYSDTLSIYHADDLFGRWTPHAQRPALVDRASTRPAGHFVQRNGRL
CCEEEEEECCCCCCCCCCCEEEEECHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHCCCCE
WRPVQDCTNGYGGALGLAEITALSPTDFAQTVHHVISPGPRWPGRKLHTLNRCGRLELID
ECCHHHHCCCCCCCCCHHHHEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEC
GTIIQPKIEALRLPDRLGAPVDARGR
CEEECCCHHHHCCCHHHCCCCCCCCC
>Mature Secondary Structure
MIVELRVDAQRPRRWLRHLIALLAADRHEVQIVPVRTDASRPAGLEALLEIERMLLRRGR
CEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC
PCGADADPALTNEPRRPPQRADIVIDFTAMPRDPTCAARLYLRPLYEGVAGEDAALAAIL
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEC
GDDLPLIEILDEVSGSIAWSGKPSAETADGLGGALDAVMARTATLLKGVIDAGPRATAPR
CCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GSVRRRSLRTPSAYVLRGLAAHLVRSIYRLCCYSPHWRIGWRHTDDAGIWNSADLSGPAW
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECEEECCCCCCCCCCCCCCCCE
RAVPSPGHRFYADPFPITWKGRTFVFVEDLDHRVGKGTIAAIEFGDDGPIGTAIPVLEEP
ECCCCCCCEEECCCCCEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
WHLSYPFLIVHDDELWMIPESSARHEVNVYRCVRFPDRWERHATLLSGVELADATIVRHD
CCCCCCEEEEECCCEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHCCHHHCEEEEEEC
GRHYMFGATRDGAGGYSDTLSIYHADDLFGRWTPHAQRPALVDRASTRPAGHFVQRNGRL
CCEEEEEECCCCCCCCCCCEEEEECHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHCCCCE
WRPVQDCTNGYGGALGLAEITALSPTDFAQTVHHVISPGPRWPGRKLHTLNRCGRLELID
ECCHHHHCCCCCCCCCHHHHEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEC
GTIIQPKIEALRLPDRLGAPVDARGR
CEEECCCHHHHCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA