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The map label for this gene is yadR [C]

Identifier: 86748104

GI number: 86748104

Start: 1124861

End: 1125181

Strand: Direct

Name: yadR [C]

Synonym: RPB_0979

Alternate gene names: 86748104

Gene position: 1124861-1125181 (Clockwise)

Preceding gene: 86748103

Following gene: 86748105

Centisome position: 21.1

GC content: 64.8

Gene sequence:

>321_bases
ATGATCATCCTGACCGAACAAGCCGGTAACGCCGTCAAGGCCGCGATGTCGCGCGCCGGCAAGACCGAAGGCGGACTACG
CATCATGGTCGAGGCCGGCGGCTGCGCCGGCTACAAATATCTGATCGGGCTCGATCCGGCCCCGCGCTCCGACGACGCGG
TCGTCGAGGCCGGCGGCGTCAAGGTGTTCGTCGATCCGGACTCGCAGCCGCTGCTCAACGGCATGACGATCGATTTCGTC
GAGAGCCTCGAAGGCTCCGGCTTCACCTTCGACAACCCGAACGCCGAGAACAAATGCGGCTGCGGCAAGTCGTTCGGCTG
A

Upstream 100 bases:

>100_bases
GATCAAAAATAGACAGCTGAATCAGCGCCTTTTTGCATCGCCACAGGCTGGCACGGCGGTTGCAGTTACTCATGTCGGAC
CCAATGCACGGAGGCCGATC

Downstream 100 bases:

>100_bases
GTGCCTCAAGCCACGGAGCGTCGTCATGCTCGGCAATCTCGACAGGCTCGATGAACTCGTCTCCAGTCCGCGCAATGCCG
GCGTGCTGCTGCAGGCCAAC

Product: HesB/YadR/YfhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MIILTEQAGNAVKAAMSRAGKTEGGLRIMVEAGGCAGYKYLIGLDPAPRSDDAVVEAGGVKVFVDPDSQPLLNGMTIDFV
ESLEGSGFTFDNPNAENKCGCGKSFG

Sequences:

>Translated_106_residues
MIILTEQAGNAVKAAMSRAGKTEGGLRIMVEAGGCAGYKYLIGLDPAPRSDDAVVEAGGVKVFVDPDSQPLLNGMTIDFV
ESLEGSGFTFDNPNAENKCGCGKSFG
>Mature_106_residues
MIILTEQAGNAVKAAMSRAGKTEGGLRIMVEAGGCAGYKYLIGLDPAPRSDDAVVEAGGVKVFVDPDSQPLLNGMTIDFV
ESLEGSGFTFDNPNAENKCGCGKSFG

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI160420328, Length=87, Percent_Identity=44.8275862068966, Blast_Score=77, Evalue=3e-15,
Organism=Homo sapiens, GI52426768, Length=105, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786351, Length=102, Percent_Identity=39.2156862745098, Blast_Score=80, Evalue=3e-17,
Organism=Escherichia coli, GI1788877, Length=104, Percent_Identity=40.3846153846154, Blast_Score=77, Evalue=2e-16,
Organism=Escherichia coli, GI1787974, Length=82, Percent_Identity=41.4634146341463, Blast_Score=74, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71998452, Length=110, Percent_Identity=39.0909090909091, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25146411, Length=104, Percent_Identity=32.6923076923077, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193209025, Length=104, Percent_Identity=32.6923076923077, Blast_Score=65, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24642263, Length=84, Percent_Identity=46.4285714285714, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 10947; Mature: 10947

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILTEQAGNAVKAAMSRAGKTEGGLRIMVEAGGCAGYKYLIGLDPAPRSDDAVVEAGGV
CEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEECCCE
KVFVDPDSQPLLNGMTIDFVESLEGSGFTFDNPNAENKCGCGKSFG
EEEECCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIILTEQAGNAVKAAMSRAGKTEGGLRIMVEAGGCAGYKYLIGLDPAPRSDDAVVEAGGV
CEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEECCCE
KVFVDPDSQPLLNGMTIDFVESLEGSGFTFDNPNAENKCGCGKSFG
EEEECCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]