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The map label for this gene is yqeB [H]

Identifier: 86748080

GI number: 86748080

Start: 1104352

End: 1105197

Strand: Reverse

Name: yqeB [H]

Synonym: RPB_0955

Alternate gene names: 86748080

Gene position: 1105197-1104352 (Counterclockwise)

Preceding gene: 86748114

Following gene: 86748077

Centisome position: 20.73

GC content: 68.44

Gene sequence:

>846_bases
ATGCATCAGCCGATCGACCACAGCCGCCGCCCGTTTGCGATCGTGCTCGGCACCAACGAGATCGCCTCTGCCGTGGCGGT
GCATCTGCACCGTGCCGGCTACTTCGTGGTCATGTCGCATGACCCGTTTCCGCCGGTGATCCGACGCCGGATGTCGTTCC
ACGACGCGCTGTACGGAGATCCGGTGTCGATCGATGGCATCGCGGGCATTCGCGCGGACGATGGCGTGCAAATTCTCAAG
GCGCGACGGCAGCCCGAGGCTATTCAGGTCTCCTGGCTGGCGCTCACCGACCTGCTGTCGGTGGCAAGCATCGACGTCCT
GGTCGACGCGCGCATGCAAAAGCACAGCGTGAAGCCGGACCTGCGCCCGCTCGCGCGGTCGAGCATCGGCCTCGGCCCCG
GTTTTGCGGCGAACGTCAATTGCGACATCGCCATCGAGACGAGACCCGGCCGCAGCGGGCTCCGGGTGGCGCGCGGCTGG
ACCGATGCCGCGGACGGCGTCGCCAGCCCGCTGGGCGATGCCGGCGCCGAGCGGTTTCAGTATTCCCGGACGAGCGGCCG
CTGGCACACGCCGGTCGACATCGGCAGCCGTGTTTTCAAGGGGTTCGTGCTGGGGCACCTGTCCAGCGAGGCGATCAGGG
CGCCGTGTGACGGCATCGTTCGCGGCATCGTGCGGGACGGCTGCGACGTGCCGGCTCAGGTCAAGCTGCTGGAGATCGAT
CCGCGCGGCCGGCACGCGCAATGGACCGGCATCGACGGCCGCGGCCGGACGATCGCAAAGGCGGTCTGCCGCGCAATCGA
GACCGAGAGAACGCCCAGCGATCCGACCATCACCCAGCCGGTGTAG

Upstream 100 bases:

>100_bases
GTCGGGCGGTACCCGTCGACGCTTTTGGACAATTCCGCACACTGGTCCGAGCCTTGCTTAGCGGGCGGCTGATCGACCAT
TCGTGACATCTGAGACCCGC

Downstream 100 bases:

>100_bases
AGCAGGCCTCAGCCGGCGCCGAACGCGACCGCGACGTTGTAGGTGATCAGGCTCGCGACATAGGCCAGCGCGAACATGTA
GATGAAGGTCACGCCCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MHQPIDHSRRPFAIVLGTNEIASAVAVHLHRAGYFVVMSHDPFPPVIRRRMSFHDALYGDPVSIDGIAGIRADDGVQILK
ARRQPEAIQVSWLALTDLLSVASIDVLVDARMQKHSVKPDLRPLARSSIGLGPGFAANVNCDIAIETRPGRSGLRVARGW
TDAADGVASPLGDAGAERFQYSRTSGRWHTPVDIGSRVFKGFVLGHLSSEAIRAPCDGIVRGIVRDGCDVPAQVKLLEID
PRGRHAQWTGIDGRGRTIAKAVCRAIETERTPSDPTITQPV

Sequences:

>Translated_281_residues
MHQPIDHSRRPFAIVLGTNEIASAVAVHLHRAGYFVVMSHDPFPPVIRRRMSFHDALYGDPVSIDGIAGIRADDGVQILK
ARRQPEAIQVSWLALTDLLSVASIDVLVDARMQKHSVKPDLRPLARSSIGLGPGFAANVNCDIAIETRPGRSGLRVARGW
TDAADGVASPLGDAGAERFQYSRTSGRWHTPVDIGSRVFKGFVLGHLSSEAIRAPCDGIVRGIVRDGCDVPAQVKLLEID
PRGRHAQWTGIDGRGRTIAKAVCRAIETERTPSDPTITQPV
>Mature_281_residues
MHQPIDHSRRPFAIVLGTNEIASAVAVHLHRAGYFVVMSHDPFPPVIRRRMSFHDALYGDPVSIDGIAGIRADDGVQILK
ARRQPEAIQVSWLALTDLLSVASIDVLVDARMQKHSVKPDLRPLARSSIGLGPGFAANVNCDIAIETRPGRSGLRVARGW
TDAADGVASPLGDAGAERFQYSRTSGRWHTPVDIGSRVFKGFVLGHLSSEAIRAPCDGIVRGIVRDGCDVPAQVKLLEID
PRGRHAQWTGIDGRGRTIAKAVCRAIETERTPSDPTITQPV

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=270, Percent_Identity=27.7777777777778, Blast_Score=104, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 30431; Mature: 30431

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQPIDHSRRPFAIVLGTNEIASAVAVHLHRAGYFVVMSHDPFPPVIRRRMSFHDALYGD
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCC
PVSIDGIAGIRADDGVQILKARRQPEAIQVSWLALTDLLSVASIDVLVDARMQKHSVKPD
CCCCCCCCCCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LRPLARSSIGLGPGFAANVNCDIAIETRPGRSGLRVARGWTDAADGVASPLGDAGAERFQ
HHHHHHHHCCCCCCCEECCEEEEEEEECCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHE
YSRTSGRWHTPVDIGSRVFKGFVLGHLSSEAIRAPCDGIVRGIVRDGCDVPAQVKLLEID
ECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEC
PRGRHAQWTGIDGRGRTIAKAVCRAIETERTPSDPTITQPV
CCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MHQPIDHSRRPFAIVLGTNEIASAVAVHLHRAGYFVVMSHDPFPPVIRRRMSFHDALYGD
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCC
PVSIDGIAGIRADDGVQILKARRQPEAIQVSWLALTDLLSVASIDVLVDARMQKHSVKPD
CCCCCCCCCCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LRPLARSSIGLGPGFAANVNCDIAIETRPGRSGLRVARGWTDAADGVASPLGDAGAERFQ
HHHHHHHHCCCCCCCEECCEEEEEEEECCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHE
YSRTSGRWHTPVDIGSRVFKGFVLGHLSSEAIRAPCDGIVRGIVRDGCDVPAQVKLLEID
ECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEC
PRGRHAQWTGIDGRGRTIAKAVCRAIETERTPSDPTITQPV
CCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]