| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is feoB [H]
Identifier: 86748079
GI number: 86748079
Start: 1102463
End: 1104343
Strand: Direct
Name: feoB [H]
Synonym: RPB_0954
Alternate gene names: 86748079
Gene position: 1102463-1104343 (Clockwise)
Preceding gene: 86748078
Following gene: 86748081
Centisome position: 20.68
GC content: 65.66
Gene sequence:
>1881_bases ATGAGCTCGATCGAAAGTCACCCCTTCAATCTCGCGCTGGTGGGAACGCCGAACAGCGGCAAGACCTCGCTGTTCAACGC GTTGACCGGCAGCCGCCAGAAGGTCGCGAATTACCCCGGCGTCACCGTCGAGCGGAAGGCCGGCGTGTTCACCACGCCCG GCGGTCGCACCGTCAGCCTGCTCGACCTGCCCGGCACTTATTCGCTGCGCGGTCGCAGCCCGGACGAGGAAATCACCCGT GACGTCGTGCTCGGCCGGCGGCCGGGTGAGGTCGTGCCGGATCTGATTCTCTGCGTCGCCGATTCCACTAATCTGCGGCT GACCTTCCGGCTGATGCTCGAGCTCAAGACGATCGGCCGGCCGCTGATGCTGGTGCTGAATATGTACGACATCGCGATGC GTCGCGGCGTCACCGTCGATCTCGAAAAGTTGTCGGAGCGGCTCGGCATTCCGGTCGTGACCTCGATCGCGGTCCGCAAG GGCGGCACCGTCGATCTGCTGAAGCGGACCGACGAGTTCGCCCTGCGCGAGAGCGCCGAGCCGACCACCAGCGGCTGGCG GCCGCTGACCACGGCGGAACTGCGCGCCTTGCAGCGGGAGGCCGATCAGATCATTGCCGACTGCGTGAGCCTGCCGGCGC GGCCGCATACGCTGACGGCCAGGATCGATTCGGTCGTCCTGCATCCGGTGGCCGGCCTCGCGATATTGCTGTTGATCCTG TTCGTGATGTTCCAGGCGGTGTTCTCTTGGGCACAGCCACTGATGGAGCTGATCTCCGGCGGCTTCGAAGCGCTCGGCGA AGTCGTGCGTGCGACCCTGCCGGAAGGCTTGCTGCAGAGCTTCCTGCAGAACGGCGTGATCTCCGGCGTCGGCAGCGTCA TCGTGTTCCTGCCGCAGATCATCATCATCTTCCTGTTCATCCTGCTGCTGGAAGATCTCGGCTATATGGCCCGCGCCGCG TTCCTGATGGACCGCATCATGGGCGGCGCCGGCCTGCACGGCCGCGCGTTCATCCCGCTGTTGTCGAGCTTCGCCTGCGC GATCCCGGGCATCATGTCGACGCGGGTGATCGACAATCGCCGCGACCGGCTGACGACCATCCTGATCGCGCCGCTGATGA CCTGTTCGGCCCGAATCCCGGTCTACACCCTGATCATCTCGGCCTTTATTCCGGCGCAGCAGGTGTTCGGCTGGATCAAC CTCCAGGGCCTGGTGATGTTCGGCCTGTACACGGTTGGCATCGCCAGCGCGCTCGGCGTCTCGGCTTTGATCAAGTTCTT CATGTGGCGCGACTACGAGCCGGCGCCGTTCATGCTGGAACTGCCGGACTACAAGCTGCCGCGGGTGAAGAGCGTCGCGA TCGGCATCTATATCCGCGCCAAGATGTTCCTGCAGCGCGCCGGCACCACGATCTTCTCGATGATGGTGCTGATCTGGTTC CTGGCGTCGTTCCCGCGGCCGCCGGCCGGCGCCACGGAGCCGGCGATCGACTACAGCCTGGCTTCGATGATCGGCCACGC CGTCGAGCCGGTGCTGGCGCCGCTGGGCTTCAACTGGCAGATCGGTGTGGCGCTGATCCCGGGCATGGCTGCACGCGAGG TTGCTGTCGCGGCGCTCGGCACCGTGTACGCCATCGAAGGCGGCAAGGAAGCCGCCGACCAGATCGGCCAGGTGCTCGCG TCGAAATGGAGCCTCGCCACCGCGCTGTCGCTGCTGGCCTGGTTCGTGTTCGCGCCGCAATGCGCCTCGACGCTCGCCGT GATCAAGCGCGAGACCGGAAGCTGGCGCTGGATGGGCGTGACCTTCATCTACATGTTCGCGCTGGCCTATGTCGCGAGCC TGATCACCTACAACGTCGCGGTCGCGTTCGGCGCCGGCTGA
Upstream 100 bases:
>100_bases ATCATCGGCCGTGATCCGATCGCCGTCCGTGTGGACAACATCACGATCGCCGTCCGGCGACGCGAGGCGATGGCCGTCGT ATTGATGTGACGATTGCGCG
Downstream 100 bases:
>100_bases GGCCTGCTCTACACCGGCTGGGTGATGGTCGGATCGCTGGGCGTTCTCTCGGTCTCGATTGCGCGGCAGACCGCCTTTGC GATCGTCCGGCCGCGGCCGT
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 626; Mature: 625
Protein sequence:
>626_residues MSSIESHPFNLALVGTPNSGKTSLFNALTGSRQKVANYPGVTVERKAGVFTTPGGRTVSLLDLPGTYSLRGRSPDEEITR DVVLGRRPGEVVPDLILCVADSTNLRLTFRLMLELKTIGRPLMLVLNMYDIAMRRGVTVDLEKLSERLGIPVVTSIAVRK GGTVDLLKRTDEFALRESAEPTTSGWRPLTTAELRALQREADQIIADCVSLPARPHTLTARIDSVVLHPVAGLAILLLIL FVMFQAVFSWAQPLMELISGGFEALGEVVRATLPEGLLQSFLQNGVISGVGSVIVFLPQIIIIFLFILLLEDLGYMARAA FLMDRIMGGAGLHGRAFIPLLSSFACAIPGIMSTRVIDNRRDRLTTILIAPLMTCSARIPVYTLIISAFIPAQQVFGWIN LQGLVMFGLYTVGIASALGVSALIKFFMWRDYEPAPFMLELPDYKLPRVKSVAIGIYIRAKMFLQRAGTTIFSMMVLIWF LASFPRPPAGATEPAIDYSLASMIGHAVEPVLAPLGFNWQIGVALIPGMAAREVAVAALGTVYAIEGGKEAADQIGQVLA SKWSLATALSLLAWFVFAPQCASTLAVIKRETGSWRWMGVTFIYMFALAYVASLITYNVAVAFGAG
Sequences:
>Translated_626_residues MSSIESHPFNLALVGTPNSGKTSLFNALTGSRQKVANYPGVTVERKAGVFTTPGGRTVSLLDLPGTYSLRGRSPDEEITR DVVLGRRPGEVVPDLILCVADSTNLRLTFRLMLELKTIGRPLMLVLNMYDIAMRRGVTVDLEKLSERLGIPVVTSIAVRK GGTVDLLKRTDEFALRESAEPTTSGWRPLTTAELRALQREADQIIADCVSLPARPHTLTARIDSVVLHPVAGLAILLLIL FVMFQAVFSWAQPLMELISGGFEALGEVVRATLPEGLLQSFLQNGVISGVGSVIVFLPQIIIIFLFILLLEDLGYMARAA FLMDRIMGGAGLHGRAFIPLLSSFACAIPGIMSTRVIDNRRDRLTTILIAPLMTCSARIPVYTLIISAFIPAQQVFGWIN LQGLVMFGLYTVGIASALGVSALIKFFMWRDYEPAPFMLELPDYKLPRVKSVAIGIYIRAKMFLQRAGTTIFSMMVLIWF LASFPRPPAGATEPAIDYSLASMIGHAVEPVLAPLGFNWQIGVALIPGMAAREVAVAALGTVYAIEGGKEAADQIGQVLA SKWSLATALSLLAWFVFAPQCASTLAVIKRETGSWRWMGVTFIYMFALAYVASLITYNVAVAFGAG >Mature_625_residues SSIESHPFNLALVGTPNSGKTSLFNALTGSRQKVANYPGVTVERKAGVFTTPGGRTVSLLDLPGTYSLRGRSPDEEITRD VVLGRRPGEVVPDLILCVADSTNLRLTFRLMLELKTIGRPLMLVLNMYDIAMRRGVTVDLEKLSERLGIPVVTSIAVRKG GTVDLLKRTDEFALRESAEPTTSGWRPLTTAELRALQREADQIIADCVSLPARPHTLTARIDSVVLHPVAGLAILLLILF VMFQAVFSWAQPLMELISGGFEALGEVVRATLPEGLLQSFLQNGVISGVGSVIVFLPQIIIIFLFILLLEDLGYMARAAF LMDRIMGGAGLHGRAFIPLLSSFACAIPGIMSTRVIDNRRDRLTTILIAPLMTCSARIPVYTLIISAFIPAQQVFGWINL QGLVMFGLYTVGIASALGVSALIKFFMWRDYEPAPFMLELPDYKLPRVKSVAIGIYIRAKMFLQRAGTTIFSMMVLIWFL ASFPRPPAGATEPAIDYSLASMIGHAVEPVLAPLGFNWQIGVALIPGMAAREVAVAALGTVYAIEGGKEAADQIGQVLAS KWSLATALSLLAWFVFAPQCASTLAVIKRETGSWRWMGVTFIYMFALAYVASLITYNVAVAFGAG
Specific function: Fe(2+) uptake system, probably driven by GTP (Probable) [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=731, Percent_Identity=32.2845417236662, Blast_Score=297, Evalue=1e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 67945; Mature: 67814
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIESHPFNLALVGTPNSGKTSLFNALTGSRQKVANYPGVTVERKAGVFTTPGGRTVSL CCCCCCCCEEEEEEECCCCCCHHHHHHHCCCHHHHCCCCCCEEECCCCEEECCCCCEEEE LDLPGTYSLRGRSPDEEITRDVVLGRRPGEVVPDLILCVADSTNLRLTFRLMLELKTIGR EECCCCEEECCCCCHHHHHHHHHCCCCCCHHHHHHHEEEECCCCCEEHHHHHHHHHHHCH PLMLVLNMYDIAMRRGVTVDLEKLSERLGIPVVTSIAVRKGGTVDLLKRTDEFALRESAE HHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCC PTTSGWRPLTTAELRALQREADQIIADCVSLPARPHTLTARIDSVVLHPVAGLAILLLIL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FVMFQAVFSWAQPLMELISGGFEALGEVVRATLPEGLLQSFLQNGVISGVGSVIVFLPQI HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHH IIIFLFILLLEDLGYMARAAFLMDRIMGGAGLHGRAFIPLLSSFACAIPGIMSTRVIDNR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC RDRLTTILIAPLMTCSARIPVYTLIISAFIPAQQVFGWINLQGLVMFGLYTVGIASALGV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALIKFFMWRDYEPAPFMLELPDYKLPRVKSVAIGIYIRAKMFLQRAGTTIFSMMVLIWF HHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH LASFPRPPAGATEPAIDYSLASMIGHAVEPVLAPLGFNWQIGVALIPGMAAREVAVAALG HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCHHHHHHHHHHH TVYAIEGGKEAADQIGQVLASKWSLATALSLLAWFVFAPQCASTLAVIKRETGSWRWMGV HHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH TFIYMFALAYVASLITYNVAVAFGAG HHHHHHHHHHHHHHHHHHHHEEECCC >Mature Secondary Structure SSIESHPFNLALVGTPNSGKTSLFNALTGSRQKVANYPGVTVERKAGVFTTPGGRTVSL CCCCCCCEEEEEEECCCCCCHHHHHHHCCCHHHHCCCCCCEEECCCCEEECCCCCEEEE LDLPGTYSLRGRSPDEEITRDVVLGRRPGEVVPDLILCVADSTNLRLTFRLMLELKTIGR EECCCCEEECCCCCHHHHHHHHHCCCCCCHHHHHHHEEEECCCCCEEHHHHHHHHHHHCH PLMLVLNMYDIAMRRGVTVDLEKLSERLGIPVVTSIAVRKGGTVDLLKRTDEFALRESAE HHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCC PTTSGWRPLTTAELRALQREADQIIADCVSLPARPHTLTARIDSVVLHPVAGLAILLLIL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FVMFQAVFSWAQPLMELISGGFEALGEVVRATLPEGLLQSFLQNGVISGVGSVIVFLPQI HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHH IIIFLFILLLEDLGYMARAAFLMDRIMGGAGLHGRAFIPLLSSFACAIPGIMSTRVIDNR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC RDRLTTILIAPLMTCSARIPVYTLIISAFIPAQQVFGWINLQGLVMFGLYTVGIASALGV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SALIKFFMWRDYEPAPFMLELPDYKLPRVKSVAIGIYIRAKMFLQRAGTTIFSMMVLIWF HHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH LASFPRPPAGATEPAIDYSLASMIGHAVEPVLAPLGFNWQIGVALIPGMAAREVAVAALG HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCHHHHHHHHHHH TVYAIEGGKEAADQIGQVLASKWSLATALSLLAWFVFAPQCASTLAVIKRETGSWRWMGV HHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH TFIYMFALAYVASLITYNVAVAFGAG HHHHHHHHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA