| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86748061
Identifier: 86748061
GI number: 86748061
Start: 1082354
End: 1084027
Strand: Direct
Name: 86748061
Synonym: RPB_0936
Alternate gene names: NA
Gene position: 1082354-1084027 (Clockwise)
Preceding gene: 86748060
Following gene: 86748062
Centisome position: 20.3
GC content: 65.47
Gene sequence:
>1674_bases ATGACGAAGCGCCGGTTTCGCGCCGCTGCGGTGCAGACACTCGCCAAGTTGGGCGATTTCGACTTCAACATCGCACTCGC GACTCGCTACGTCGAAGACGCGGTTCGCCAGGGCGCCGAGCTGATCGTATTTCCGGAGTGCATGGACACCGGCTATCTGT TCGATTCGCCGGAGCATTGCCGCGAACTGGCGGAGACGCTGGCCGATGGTCCGTTCGTCAAGGCGCTGGCGGCGCTCAGC CGCAAGCACGGCGTCTATATCGCCAGCGGCATCACCGAATGGGATCCCGCCAAAGAGAAGATCTTCAACACCGGCATCAT GTTCGATCGCAAGGGTGAGGTCGCCTGCCACTATCACAAGCAGTTTCTCGCCACCCACGATCAGAACTGGTTCGCCTTCG GCGAGCGCGGCTGCCCGGTGGTCGATACCGACCTCGGCAGGATCGGCCTGCTGATCTGCTTCGACGGCCGCATCCCCGAA ATCTTCCGCGCCATGACGATGCAGGGCGCCGAGGTGATCGTCGACATGGCCAATTTCTTCGCGATGGATCAGGCCGACAT GTGGGGCCCGGCGCGAAGCTACGAGAACGGCGTCTGGCTGGTGGCCGCCACCAAGGCGGGCTACGAGCGCTCGATCTACT ATCCGGGCGGCAGCATGATCGTCGATCCGAAGGGCCGGGTGCTGTCGAAGGTGCCGTACGACACCCACGGCATGTCGATC GCGACGATCGATCTCGACGCCGCCGCCGACAAATCGATCTACACCGCCAACGACAAGATCGCCGATCGCCGTCCGGAGAC CTACGGCATCATGGCGCTGCCGTACGAGCAGACCCCGGTCTACGGCGTCGCCGATCGTCCGCTGATCCCGTCGAAATCCG TCACCAAGGTGGCGGCGGTGCAGATTCACGTCACGCCGGAATGCAGCGTCGCGGAGGTGCTCGACATGGTCGACCACACC GCCAAGCTCGGCGCCAAGGTGCTGGTGCTGCCGGAATACGCATTCTCCGAGCACTACATCCTTTCCGTCGAGGAGGCGTC CGAGCAGGCCGACCGGACGGCGGAGAATTTGGCGGCAGTCGCGAAGATCGCCGCGCGCTACGGCTGCCTGATCGCGGCGC CGGTCATCGAGCGCGCCGCCGCCGGGCTCTATGTGACCACCGTGCTGATCGGCCCCGACGGCAAGGAGATCGGCCGCTAC CGCAAGACACATCTCACCGCCGAAGAGCGCCGGTGGGCGGCCGCTGGCCGTGACTATCCGGTGTTCGAGACGCCGTTCGG CCGCATCGGCGTGATGTCGGGCTACGATGCGGTGTTTCCGGAGACCTCGCGCTGTCTCGCGATCGGCGGCGCCGATATCA TTCTGTGGCCCGCCGCGTTGCGCGAGCCGTTCGAGCGCGAGCTCATCGCCGTGCCGCGCGCCGAGGACAACCGGGTGGCG GTCGTGCTCGCCAACCGCGTCGACAGCCCGTATCCGGGCGGCAGCGTCGTGATCCCGCCGACCGGCTTCCCGCAATGGGA CATCAACATCGCCGCTCCGCGGGTGATGAAACTCGGCGCGGTCATGCCCAAGCACATAGATCTGGCGGTCTGCCGCCAGA AGCTGATGATCCCGAAGGTCGACATGTTTGCCAACCGGCTGGTGGAGACCTACGCTCCGATCGTCGCGGCCTAG
Upstream 100 bases:
>100_bases CCATTGCCTCGATCGCTTCTGGCAGGAAGTCAAGAAATGACGGGCGCCGGCTGAGCCGGGTCCGAGGAATCCGAACCACC ATCAGAACCTGGAGACTGAC
Downstream 100 bases:
>100_bases CCACTTGACGGGTGACCGGCCGATGACGGTCGCGCGATCGGCGCAGCAGCGCCGGTCGCCCCGCAGGACGGCAGAGCACG TGGCCAAGACACAACGCAAG
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MTKRRFRAAAVQTLAKLGDFDFNIALATRYVEDAVRQGAELIVFPECMDTGYLFDSPEHCRELAETLADGPFVKALAALS RKHGVYIASGITEWDPAKEKIFNTGIMFDRKGEVACHYHKQFLATHDQNWFAFGERGCPVVDTDLGRIGLLICFDGRIPE IFRAMTMQGAEVIVDMANFFAMDQADMWGPARSYENGVWLVAATKAGYERSIYYPGGSMIVDPKGRVLSKVPYDTHGMSI ATIDLDAAADKSIYTANDKIADRRPETYGIMALPYEQTPVYGVADRPLIPSKSVTKVAAVQIHVTPECSVAEVLDMVDHT AKLGAKVLVLPEYAFSEHYILSVEEASEQADRTAENLAAVAKIAARYGCLIAAPVIERAAAGLYVTTVLIGPDGKEIGRY RKTHLTAEERRWAAAGRDYPVFETPFGRIGVMSGYDAVFPETSRCLAIGGADIILWPAALREPFERELIAVPRAEDNRVA VVLANRVDSPYPGGSVVIPPTGFPQWDINIAAPRVMKLGAVMPKHIDLAVCRQKLMIPKVDMFANRLVETYAPIVAA
Sequences:
>Translated_557_residues MTKRRFRAAAVQTLAKLGDFDFNIALATRYVEDAVRQGAELIVFPECMDTGYLFDSPEHCRELAETLADGPFVKALAALS RKHGVYIASGITEWDPAKEKIFNTGIMFDRKGEVACHYHKQFLATHDQNWFAFGERGCPVVDTDLGRIGLLICFDGRIPE IFRAMTMQGAEVIVDMANFFAMDQADMWGPARSYENGVWLVAATKAGYERSIYYPGGSMIVDPKGRVLSKVPYDTHGMSI ATIDLDAAADKSIYTANDKIADRRPETYGIMALPYEQTPVYGVADRPLIPSKSVTKVAAVQIHVTPECSVAEVLDMVDHT AKLGAKVLVLPEYAFSEHYILSVEEASEQADRTAENLAAVAKIAARYGCLIAAPVIERAAAGLYVTTVLIGPDGKEIGRY RKTHLTAEERRWAAAGRDYPVFETPFGRIGVMSGYDAVFPETSRCLAIGGADIILWPAALREPFERELIAVPRAEDNRVA VVLANRVDSPYPGGSVVIPPTGFPQWDINIAAPRVMKLGAVMPKHIDLAVCRQKLMIPKVDMFANRLVETYAPIVAA >Mature_556_residues TKRRFRAAAVQTLAKLGDFDFNIALATRYVEDAVRQGAELIVFPECMDTGYLFDSPEHCRELAETLADGPFVKALAALSR KHGVYIASGITEWDPAKEKIFNTGIMFDRKGEVACHYHKQFLATHDQNWFAFGERGCPVVDTDLGRIGLLICFDGRIPEI FRAMTMQGAEVIVDMANFFAMDQADMWGPARSYENGVWLVAATKAGYERSIYYPGGSMIVDPKGRVLSKVPYDTHGMSIA TIDLDAAADKSIYTANDKIADRRPETYGIMALPYEQTPVYGVADRPLIPSKSVTKVAAVQIHVTPECSVAEVLDMVDHTA KLGAKVLVLPEYAFSEHYILSVEEASEQADRTAENLAAVAKIAARYGCLIAAPVIERAAAGLYVTTVLIGPDGKEIGRYR KTHLTAEERRWAAAGRDYPVFETPFGRIGVMSGYDAVFPETSRCLAIGGADIILWPAALREPFERELIAVPRAEDNRVAV VLANRVDSPYPGGSVVIPPTGFPQWDINIAAPRVMKLGAVMPKHIDLAVCRQKLMIPKVDMFANRLVETYAPIVAA
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI5031947, Length=284, Percent_Identity=27.8169014084507, Blast_Score=94, Evalue=5e-19, Organism=Homo sapiens, GI297632350, Length=284, Percent_Identity=27.8169014084507, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI297632348, Length=284, Percent_Identity=27.8169014084507, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI9910460, Length=206, Percent_Identity=30.0970873786408, Blast_Score=83, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17556280, Length=261, Percent_Identity=28.3524904214559, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17533173, Length=307, Percent_Identity=28.9902280130293, Blast_Score=76, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6323383, Length=282, Percent_Identity=25.531914893617, Blast_Score=94, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6322335, Length=285, Percent_Identity=21.4035087719298, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI17933642, Length=301, Percent_Identity=27.906976744186, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI21355835, Length=259, Percent_Identity=26.2548262548263, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 61203; Mature: 61072
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRRFRAAAVQTLAKLGDFDFNIALATRYVEDAVRQGAELIVFPECMDTGYLFDSPEHC CCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHH RELAETLADGPFVKALAALSRKHGVYIASGITEWDPAKEKIFNTGIMFDRKGEVACHYHK HHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCEEEECCCCEEEHHHH QFLATHDQNWFAFGERGCPVVDTDLGRIGLLICFDGRIPEIFRAMTMQGAEVIVDMANFF HHHHHCCCCEEEECCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHH AMDQADMWGPARSYENGVWLVAATKAGYERSIYYPGGSMIVDPKGRVLSKVPYDTHGMSI CCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEECCCCCEEEECCCCCCCCEE ATIDLDAAADKSIYTANDKIADRRPETYGIMALPYEQTPVYGVADRPLIPSKSVTKVAAV EEEEECCCCCCCEEECCCCHHCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCEEEEE QIHVTPECSVAEVLDMVDHTAKLGAKVLVLPEYAFSEHYILSVEEASEQADRTAENLAAV EEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHH AKIAARYGCLIAAPVIERAAAGLYVTTVLIGPDGKEIGRYRKTHLTAEERRWAAAGRDYP HHHHHHHCCEEEHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCC VFETPFGRIGVMSGYDAVFPETSRCLAIGGADIILWPAALREPFERELIAVPRAEDNRVA CEECCCCCEEECCCCCCCCCCCCCEEEECCCCEEEECHHHCCCHHHCEEECCCCCCCEEE VVLANRVDSPYPGGSVVIPPTGFPQWDINIAAPRVMKLGAVMPKHIDLAVCRQKLMIPKV EEEECCCCCCCCCCEEEECCCCCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHCCCCH DMFANRLVETYAPIVAA HHHHHHHHHHHHHHHCC >Mature Secondary Structure TKRRFRAAAVQTLAKLGDFDFNIALATRYVEDAVRQGAELIVFPECMDTGYLFDSPEHC CCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHH RELAETLADGPFVKALAALSRKHGVYIASGITEWDPAKEKIFNTGIMFDRKGEVACHYHK HHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCEEEECCCCEEEHHHH QFLATHDQNWFAFGERGCPVVDTDLGRIGLLICFDGRIPEIFRAMTMQGAEVIVDMANFF HHHHHCCCCEEEECCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHH AMDQADMWGPARSYENGVWLVAATKAGYERSIYYPGGSMIVDPKGRVLSKVPYDTHGMSI CCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEECCCCCEEEECCCCCCCCEE ATIDLDAAADKSIYTANDKIADRRPETYGIMALPYEQTPVYGVADRPLIPSKSVTKVAAV EEEEECCCCCCCEEECCCCHHCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCEEEEE QIHVTPECSVAEVLDMVDHTAKLGAKVLVLPEYAFSEHYILSVEEASEQADRTAENLAAV EEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHH AKIAARYGCLIAAPVIERAAAGLYVTTVLIGPDGKEIGRYRKTHLTAEERRWAAAGRDYP HHHHHHHCCEEEHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCC VFETPFGRIGVMSGYDAVFPETSRCLAIGGADIILWPAALREPFERELIAVPRAEDNRVA CEECCCCCEEECCCCCCCCCCCCCEEEECCCCEEEECHHHCCCHHHCEEECCCCCCCEEE VVLANRVDSPYPGGSVVIPPTGFPQWDINIAAPRVMKLGAVMPKHIDLAVCRQKLMIPKV EEEECCCCCCCCCCEEEECCCCCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHCCCCH DMFANRLVETYAPIVAA HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]