| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748045
Identifier: 86748045
GI number: 86748045
Start: 1062834
End: 1063790
Strand: Reverse
Name: 86748045
Synonym: RPB_0919
Alternate gene names: NA
Gene position: 1063790-1062834 (Counterclockwise)
Preceding gene: 86748046
Following gene: 86748044
Centisome position: 19.95
GC content: 59.77
Gene sequence:
>957_bases GTGCCCGTAGAGACTTTCCAATACCTTGACAGCCTCGTAACGACCAACCCGGACGTGAACGACGGTCTGGTCAATGGCGA CGACCATATCCGGGGCACCAAGCTTGCCCTGAAGAACTCCTTCCCGCAGATCGCTGGAGCGGTCACCGCATCCCACACTG ACCTCTCCACGGTCGGCTCTTGGGTGACTGGTGGTGCCCCGCTGCTCTCTGGCGCTGGAACGTACTTCAACGTCAACCCG ACCGATGGCTTCAGGAACACTGTAGCCGGCGACATTGACGTGGTGCTCGCTGGCACCATCGCAGCGACCTTCCAGCGCAC GGCGGGTGTCAACTTCTTCAAGGTCTCTGGAGGCATTCAGGCCACTGCAGAGATCAAAGGCCCTGGTGTCTGTCCTCCAG GCTCCACGGTGATCTGGTGGGATGACACGCTTCCCGAGGATGGCCTTTGGGCTTGGGCAAACGGTCAGGTGATCACCGAC GCCGCTACGCGCTGTCCGATCTTGCTCGCGCGGTGGGGTAGTCGCTTCGGCGGCAACGGCGTGACTTCCATGGGCCTCCC GAACCTCCAGGAGGTCGTTCCGGTTGGCAAGAGTGGCATGGGCGGTGGTTTGGTCCCTGGGGTGCTTTCGAGCATCGCTG GAGCCCTCAAGACTGCCCTTCATGCACTGATCGGAGCAGACGCTGTCACGCTTACGACAGGGCACCTACCGAACCTGGAA TCGTCTGGTACCAACCTCATCAGTCTCTCTGGTTCCACGTCGAACGTCGTCTATGGATACTCAGGTACGAGCGATCAGTA TGGTCCTTATAACGGTTCGGCAGTAACCGCCTACGGGCCGGTGCCGGTGAATGTAAGCGGTTCGGTCAACATCACCACTC GCTTCAATGGTGGTGGCAATGCTCACAACAACGTCCAACCGTCCAGGACGGTCAATTGGATCGTTCGGCTAGGTTGA
Upstream 100 bases:
>100_bases CCGCTCAGTCTTCAGTCAGCGGCCCATGAACCTCATGCCAACGCCTAGAGACACGATGATCATTGTCCACTACACCTATA TGCCGAAAGAGGCCCGTTAA
Downstream 100 bases:
>100_bases GTTACCAACTAGAGGGGCTTCGGGACGGCCCGGCTCTACAGAAGGCTCAGCCTCCCGGGAGGCTACACTCAGGACCGTAA AGGCACCCCTGTTGTTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MPVETFQYLDSLVTTNPDVNDGLVNGDDHIRGTKLALKNSFPQIAGAVTASHTDLSTVGSWVTGGAPLLSGAGTYFNVNP TDGFRNTVAGDIDVVLAGTIAATFQRTAGVNFFKVSGGIQATAEIKGPGVCPPGSTVIWWDDTLPEDGLWAWANGQVITD AATRCPILLARWGSRFGGNGVTSMGLPNLQEVVPVGKSGMGGGLVPGVLSSIAGALKTALHALIGADAVTLTTGHLPNLE SSGTNLISLSGSTSNVVYGYSGTSDQYGPYNGSAVTAYGPVPVNVSGSVNITTRFNGGGNAHNNVQPSRTVNWIVRLG
Sequences:
>Translated_318_residues MPVETFQYLDSLVTTNPDVNDGLVNGDDHIRGTKLALKNSFPQIAGAVTASHTDLSTVGSWVTGGAPLLSGAGTYFNVNP TDGFRNTVAGDIDVVLAGTIAATFQRTAGVNFFKVSGGIQATAEIKGPGVCPPGSTVIWWDDTLPEDGLWAWANGQVITD AATRCPILLARWGSRFGGNGVTSMGLPNLQEVVPVGKSGMGGGLVPGVLSSIAGALKTALHALIGADAVTLTTGHLPNLE SSGTNLISLSGSTSNVVYGYSGTSDQYGPYNGSAVTAYGPVPVNVSGSVNITTRFNGGGNAHNNVQPSRTVNWIVRLG >Mature_317_residues PVETFQYLDSLVTTNPDVNDGLVNGDDHIRGTKLALKNSFPQIAGAVTASHTDLSTVGSWVTGGAPLLSGAGTYFNVNPT DGFRNTVAGDIDVVLAGTIAATFQRTAGVNFFKVSGGIQATAEIKGPGVCPPGSTVIWWDDTLPEDGLWAWANGQVITDA ATRCPILLARWGSRFGGNGVTSMGLPNLQEVVPVGKSGMGGGLVPGVLSSIAGALKTALHALIGADAVTLTTGHLPNLES SGTNLISLSGSTSNVVYGYSGTSDQYGPYNGSAVTAYGPVPVNVSGSVNITTRFNGGGNAHNNVQPSRTVNWIVRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32557; Mature: 32426
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVETFQYLDSLVTTNPDVNDGLVNGDDHIRGTKLALKNSFPQIAGAVTASHTDLSTVGS CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHEEEECCCCHHHHHH WVTGGAPLLSGAGTYFNVNPTDGFRNTVAGDIDVVLAGTIAATFQRTAGVNFFKVSGGIQ HHCCCCHHHCCCCCEEECCCCCCCHHCCCCCEEEEEEHHHHHHHHHHCCCEEEEECCCEE ATAEIKGPGVCPPGSTVIWWDDTLPEDGLWAWANGQVITDAATRCPILLARWGSRFGGNG EEEEECCCCCCCCCCEEEEECCCCCCCCEEEEECCEEEECCCCCCCEEEEHHCCCCCCCC VTSMGLPNLQEVVPVGKSGMGGGLVPGVLSSIAGALKTALHALIGADAVTLTTGHLPNLE CCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC SSGTNLISLSGSTSNVVYGYSGTSDQYGPYNGSAVTAYGPVPVNVSGSVNITTRFNGGGN CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCEEEECCCCEEEEEEECCCCC AHNNVQPSRTVNWIVRLG CCCCCCCCCEEEEEEEEC >Mature Secondary Structure PVETFQYLDSLVTTNPDVNDGLVNGDDHIRGTKLALKNSFPQIAGAVTASHTDLSTVGS CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHEEEECCCCHHHHHH WVTGGAPLLSGAGTYFNVNPTDGFRNTVAGDIDVVLAGTIAATFQRTAGVNFFKVSGGIQ HHCCCCHHHCCCCCEEECCCCCCCHHCCCCCEEEEEEHHHHHHHHHHCCCEEEEECCCEE ATAEIKGPGVCPPGSTVIWWDDTLPEDGLWAWANGQVITDAATRCPILLARWGSRFGGNG EEEEECCCCCCCCCCEEEEECCCCCCCCEEEEECCEEEECCCCCCCEEEEHHCCCCCCCC VTSMGLPNLQEVVPVGKSGMGGGLVPGVLSSIAGALKTALHALIGADAVTLTTGHLPNLE CCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC SSGTNLISLSGSTSNVVYGYSGTSDQYGPYNGSAVTAYGPVPVNVSGSVNITTRFNGGGN CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCEEEECCCCEEEEEEECCCCC AHNNVQPSRTVNWIVRLG CCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA