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The map label for this gene is lysK [H]

Identifier: 86748014

GI number: 86748014

Start: 1016546

End: 1018183

Strand: Direct

Name: lysK [H]

Synonym: RPB_0888

Alternate gene names: 86748014

Gene position: 1016546-1018183 (Clockwise)

Preceding gene: 86748013

Following gene: 86748019

Centisome position: 19.07

GC content: 65.51

Gene sequence:

>1638_bases
ATGACCACGACCGATCTGCCCAGCGCGTCCGACCTGCGCACGCTCGCCGAACAATCCAACGCCTGGCCGTTCGAGCAGGC
GCGCGCGCTGGTGAACCGCCTGAAAAAGCAGCCGAAGGACGAGGTGCTGTTCGAGACCGGCTACGGCCCGTCCGGCCTGC
CGCATATCGGCACCTTCGGCGAGGTCGCCCGCACCACCATGGTGCGCCACGCCTTCCGGGTGCTGACCGACGACAAGATC
AAGACCAAGCTGCTGGCGTTTTCCGACGACATGGACGGGCTGCGCAAGGTGCCGGACAATGTGCCGAACAAGGAGATGCT
GGCGCAGCATCTCGGCAAGTCGCTGACCAGCGTGCCCGACCCGTTCGGCACCCACGAGTCGTTCGGCGCGCACAACAATG
CGCGGCTGCGCGCCTTCCTCGACACCTTCGGCTTCGACTACGAGTTCGCCTCGGCGACCGACTACTACAAGTCCGGCCGG
TTCGACGCCACGCTGCTGAAGGTGCTGCAGCGGCTCGACAAGGTGATGGCGATCATGCTGCCGAGCCTGCGCGAAGAGCG
CGCCGCGAGCTACTCGCCGTTTCTCCCCGTGTGTCCGCGCACCGGCGTGGTGCTGCAGGTGCCGATCGTGGATCACGACG
TCGCCGCCGGCACGGTGTCCTACGACGATCCGGAGACCAAGGAGCGGGTGACGCTCCCGGTCACCGGCGGGCATTGCAAA
TTGCAGTGGAAGCCCGACTGGGCGATGCGCTGGACCGCGCTCGGCGTCGACTACGAAATGGCCGGCAAGGACCTGATCGA
TTCGGTGAAGCTGTCCGGCAAGATCGCGCAGGCGATCGGCGGCACGCCGCCGGAGGGCTTCAACTACGAGCTGTTCCTCG
ACGACAAGGGCCAGAAGATCTCCAAGTCGAAGGGCAACGGTCTCACCATCGATGAATGGCTGCGCTACGCCTCGCCGGAA
TCGCTGTCGCTGTTCATGTATCGCGAGCCGAAGGCGGCGAAGCGGCTGTATTTCGACGTCATCCCGCGCAATGTCGACGA
GTATCAGCAGTTCCTCGACGGCTTTGGCCGGCAGGACGCCAAGCAGCAACTCGCCAATCCGGTCTGGCACATTCACAGCG
GCAATCCGCCGAAATCCGACATGCCGGTGACGTTCCAGCTGCTGCTGACGCTGGTGTCGTCGTCGAACGCCGAGAACGCC
GAGACGCTGTGGGGCTTCATCGGCCGCTACCGGCCGGGCGTGACGCCGCAGACCCATCCGAAGCTCGACGCCATGGTCGG
CTACGCGATCAACTACTATCGCGACTTCGTGGCGCCGACGAAGGTGTTCCGCGATCCGACCGATCAGGAGCGCGCCGCCT
TGCAGGATCTGCGCGATGCTCTGTCGCAATTGGCGCCGGACTCGACCGCGGAAGCGATCCAGGACGTGGTCTACGAGATC
GGCCGCCGCGAGCCGTTCCTCGACCACAAGAAGGCCGCCAAGGACGGCAAGCCGGGCGTGTCGCTCGACTGGTTCAACAT
GCTGTACCAGGTGCTGCTCGGCCAGGAAAAAGGCCCGCGCTTCGGCTCCTTCGTGGCGGTCTACGGCCTCAACAATGCGG
TCGCGATGATCGACGGCGCGCTGGCGCGCAGCGCGTAG

Upstream 100 bases:

>100_bases
CTGGGAGAAGGGCCGCTACACCGATCTGTGGCTGCGGTATTTTTCCGTCAGCCCGTTCTGACAAATTCGAAAGACCCGCC
TCGCGCGGTTGGAGACCTTG

Downstream 100 bases:

>100_bases
TCTCGCAAGACTTGATCAAGCGGCGCGCACCGCTGCCGAGAAGCGGTCGACCTCGGTCTTGAGGTGGCGGCTTTCCGCGA
GCAGCGAGGCGGCCAGATCG

Product: lysyl-tRNA synthetase

Products: NA

Alternate protein names: Lysine--tRNA ligase; LysRS [H]

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MTTTDLPSASDLRTLAEQSNAWPFEQARALVNRLKKQPKDEVLFETGYGPSGLPHIGTFGEVARTTMVRHAFRVLTDDKI
KTKLLAFSDDMDGLRKVPDNVPNKEMLAQHLGKSLTSVPDPFGTHESFGAHNNARLRAFLDTFGFDYEFASATDYYKSGR
FDATLLKVLQRLDKVMAIMLPSLREERAASYSPFLPVCPRTGVVLQVPIVDHDVAAGTVSYDDPETKERVTLPVTGGHCK
LQWKPDWAMRWTALGVDYEMAGKDLIDSVKLSGKIAQAIGGTPPEGFNYELFLDDKGQKISKSKGNGLTIDEWLRYASPE
SLSLFMYREPKAAKRLYFDVIPRNVDEYQQFLDGFGRQDAKQQLANPVWHIHSGNPPKSDMPVTFQLLLTLVSSSNAENA
ETLWGFIGRYRPGVTPQTHPKLDAMVGYAINYYRDFVAPTKVFRDPTDQERAALQDLRDALSQLAPDSTAEAIQDVVYEI
GRREPFLDHKKAAKDGKPGVSLDWFNMLYQVLLGQEKGPRFGSFVAVYGLNNAVAMIDGALARSA

Sequences:

>Translated_545_residues
MTTTDLPSASDLRTLAEQSNAWPFEQARALVNRLKKQPKDEVLFETGYGPSGLPHIGTFGEVARTTMVRHAFRVLTDDKI
KTKLLAFSDDMDGLRKVPDNVPNKEMLAQHLGKSLTSVPDPFGTHESFGAHNNARLRAFLDTFGFDYEFASATDYYKSGR
FDATLLKVLQRLDKVMAIMLPSLREERAASYSPFLPVCPRTGVVLQVPIVDHDVAAGTVSYDDPETKERVTLPVTGGHCK
LQWKPDWAMRWTALGVDYEMAGKDLIDSVKLSGKIAQAIGGTPPEGFNYELFLDDKGQKISKSKGNGLTIDEWLRYASPE
SLSLFMYREPKAAKRLYFDVIPRNVDEYQQFLDGFGRQDAKQQLANPVWHIHSGNPPKSDMPVTFQLLLTLVSSSNAENA
ETLWGFIGRYRPGVTPQTHPKLDAMVGYAINYYRDFVAPTKVFRDPTDQERAALQDLRDALSQLAPDSTAEAIQDVVYEI
GRREPFLDHKKAAKDGKPGVSLDWFNMLYQVLLGQEKGPRFGSFVAVYGLNNAVAMIDGALARSA
>Mature_544_residues
TTTDLPSASDLRTLAEQSNAWPFEQARALVNRLKKQPKDEVLFETGYGPSGLPHIGTFGEVARTTMVRHAFRVLTDDKIK
TKLLAFSDDMDGLRKVPDNVPNKEMLAQHLGKSLTSVPDPFGTHESFGAHNNARLRAFLDTFGFDYEFASATDYYKSGRF
DATLLKVLQRLDKVMAIMLPSLREERAASYSPFLPVCPRTGVVLQVPIVDHDVAAGTVSYDDPETKERVTLPVTGGHCKL
QWKPDWAMRWTALGVDYEMAGKDLIDSVKLSGKIAQAIGGTPPEGFNYELFLDDKGQKISKSKGNGLTIDEWLRYASPES
LSLFMYREPKAAKRLYFDVIPRNVDEYQQFLDGFGRQDAKQQLANPVWHIHSGNPPKSDMPVTFQLLLTLVSSSNAENAE
TLWGFIGRYRPGVTPQTHPKLDAMVGYAINYYRDFVAPTKVFRDPTDQERAALQDLRDALSQLAPDSTAEAIQDVVYEIG
RREPFLDHKKAAKDGKPGVSLDWFNMLYQVLLGQEKGPRFGSFVAVYGLNNAVAMIDGALARSA

Specific function: Unknown

COG id: COG1384

COG function: function code J; Lysyl-tRNA synthetase (class I)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008925
- InterPro:   IPR020751
- InterPro:   IPR001412
- InterPro:   IPR002904
- InterPro:   IPR020754
- InterPro:   IPR020756
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01921 tRNA-synt_1f [H]

EC number: =6.1.1.6 [H]

Molecular weight: Translated: 60782; Mature: 60650

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTDLPSASDLRTLAEQSNAWPFEQARALVNRLKKQPKDEVLFETGYGPSGLPHIGTFG
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCCHH
EVARTTMVRHAFRVLTDDKIKTKLLAFSDDMDGLRKVPDNVPNKEMLAQHLGKSLTSVPD
HHHHHHHHHHHHHHHCCCHHHHHHEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
PFGTHESFGAHNNARLRAFLDTFGFDYEFASATDYYKSGRFDATLLKVLQRLDKVMAIML
CCCCCCCCCCCCCCHHHHHHHHHCCCCEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
PSLREERAASYSPFLPVCPRTGVVLQVPIVDHDVAAGTVSYDDPETKERVTLPVTGGHCK
HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEE
LQWKPDWAMRWTALGVDYEMAGKDLIDSVKLSGKIAQAIGGTPPEGFNYELFLDDKGQKI
EEECCCHHEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCH
SKSKGNGLTIDEWLRYASPESLSLFMYREPKAAKRLYFDVIPRNVDEYQQFLDGFGRQDA
HCCCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
KQQLANPVWHIHSGNPPKSDMPVTFQLLLTLVSSSNAENAETLWGFIGRYRPGVTPQTHP
HHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
KLDAMVGYAINYYRDFVAPTKVFRDPTDQERAALQDLRDALSQLAPDSTAEAIQDVVYEI
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GRREPFLDHKKAAKDGKPGVSLDWFNMLYQVLLGQEKGPRFGSFVAVYGLNNAVAMIDGA
HCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHH
LARSA
HHCCC
>Mature Secondary Structure 
TTTDLPSASDLRTLAEQSNAWPFEQARALVNRLKKQPKDEVLFETGYGPSGLPHIGTFG
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCCHH
EVARTTMVRHAFRVLTDDKIKTKLLAFSDDMDGLRKVPDNVPNKEMLAQHLGKSLTSVPD
HHHHHHHHHHHHHHHCCCHHHHHHEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
PFGTHESFGAHNNARLRAFLDTFGFDYEFASATDYYKSGRFDATLLKVLQRLDKVMAIML
CCCCCCCCCCCCCCHHHHHHHHHCCCCEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
PSLREERAASYSPFLPVCPRTGVVLQVPIVDHDVAAGTVSYDDPETKERVTLPVTGGHCK
HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEE
LQWKPDWAMRWTALGVDYEMAGKDLIDSVKLSGKIAQAIGGTPPEGFNYELFLDDKGQKI
EEECCCHHEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCH
SKSKGNGLTIDEWLRYASPESLSLFMYREPKAAKRLYFDVIPRNVDEYQQFLDGFGRQDA
HCCCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
KQQLANPVWHIHSGNPPKSDMPVTFQLLLTLVSSSNAENAETLWGFIGRYRPGVTPQTHP
HHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
KLDAMVGYAINYYRDFVAPTKVFRDPTDQERAALQDLRDALSQLAPDSTAEAIQDVVYEI
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GRREPFLDHKKAAKDGKPGVSLDWFNMLYQVLLGQEKGPRFGSFVAVYGLNNAVAMIDGA
HCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHH
LARSA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA