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The map label for this gene is ybhH [H]

Identifier: 86748004

GI number: 86748004

Start: 1005146

End: 1006264

Strand: Reverse

Name: ybhH [H]

Synonym: RPB_0878

Alternate gene names: 86748004

Gene position: 1006264-1005146 (Counterclockwise)

Preceding gene: 86748005

Following gene: 86748003

Centisome position: 18.87

GC content: 68.1

Gene sequence:

>1119_bases
ATGCAGACGGCCATCCCCTGCCTGTTCATGCGCGGCGGGACCTCTCGCGGCCCCTTCTTCAATGCTGCCGATCTGCCGAG
CGACATTGCCACCCGCGACAGAGTGCTGCTCGCGGTGATGGGATCGCCGGATCGTCGCCAGATCGACGGCCTCGGCGGCG
CGCATCCCTTGACCAGCAAGGTCGGCATCGTCGCGAAAGGCTCCAAGCCCGGCGTCGATCTCGACTTTCTGTTCGCGCAA
TTGCAGCCCGACAAGGACAGTGTCGACACCACGCCGAACTGCGGCAACATGCTCGCCGCGGTGGTGCCGTTCGCGCTGGA
AACCGGACTGGTGCAGCCGCAGGGCGACACCACGACCCTGCGCGTGCTGACGCTCAACACCGACATGCAATGCGACATCA
CCGTGCAAACGCCGGACGGTCACGTCAGCTATGACGGCGACGCGCGGATCGACGGCGCGCCGGGCACCTCGGCGCCGATC
AAGATCAACTTCCTCGACACCGCGGGCTCGGTGGCGCCCTCACTGCTGCCGACCGGTAACGTCCGCGACGTCATCGACGG
CGTCGAGGTGACCTGCATCGACAACGGCATGCCGCTGGTGATGTTCAGGGCCGAGGCCGTCGGCCGCACCGGCTATGAGG
GTGTCGCGCAGCTCAATGCCGATACCGACCTCAAGGCGCGGCTGGAGCGGCTGCGGATCGCCTGCGGCCACGCCATGCAG
CTCGGCGACGTCACCGCGAAAAACTATCCGAAGATGACGCTGATCACCGCGCCGCGCGCGGGTGGCAGCATCACCACCCG
CAGCTTCATCCCGCATGTCTGCCACGACGCCATCGGCGTGCTCGCCGCGGTGACGGTGGCGACCGCCTGCGTGCTCGACG
GCTCGGTGACGCAGGGCATCGCGCAGGTGCCGGACGGCACGATCAAACAGATCTCGGTCGAACACCCGACCGGCGAATTC
TCGGTCGAGATCGAGGTCGATCCGGCCAACCCGCAAACCGTCACCCGCGCCGCTTTGCTGCGCACCGCGCGGCTGATCAT
GCGCGGCGAGGCGATGGTGCCGGCGTCGGTGTGGGGCGGGAAGACGGCCGGCGACGCAGCCCTGCGGCAGGCGGGTTGA

Upstream 100 bases:

>100_bases
ACTTTGCCATACCTTAACCCGATAGCTGTTATTGAGACGCGGCGGTGGCGTCGTCCGGCCGCCAACGCCACAATGGCATA
ATAATCCGGGAAGGAAGCGA

Downstream 100 bases:

>100_bases
GGCATCGAATGCAGAGAAGAAATAACATCGAAGCCCGCGCTGTTCGTGCGAGCGACGCCACAAGCCACGGACGTCATACG
CGGGCTTGACCCGCGTATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MQTAIPCLFMRGGTSRGPFFNAADLPSDIATRDRVLLAVMGSPDRRQIDGLGGAHPLTSKVGIVAKGSKPGVDLDFLFAQ
LQPDKDSVDTTPNCGNMLAAVVPFALETGLVQPQGDTTTLRVLTLNTDMQCDITVQTPDGHVSYDGDARIDGAPGTSAPI
KINFLDTAGSVAPSLLPTGNVRDVIDGVEVTCIDNGMPLVMFRAEAVGRTGYEGVAQLNADTDLKARLERLRIACGHAMQ
LGDVTAKNYPKMTLITAPRAGGSITTRSFIPHVCHDAIGVLAAVTVATACVLDGSVTQGIAQVPDGTIKQISVEHPTGEF
SVEIEVDPANPQTVTRAALLRTARLIMRGEAMVPASVWGGKTAGDAALRQAG

Sequences:

>Translated_372_residues
MQTAIPCLFMRGGTSRGPFFNAADLPSDIATRDRVLLAVMGSPDRRQIDGLGGAHPLTSKVGIVAKGSKPGVDLDFLFAQ
LQPDKDSVDTTPNCGNMLAAVVPFALETGLVQPQGDTTTLRVLTLNTDMQCDITVQTPDGHVSYDGDARIDGAPGTSAPI
KINFLDTAGSVAPSLLPTGNVRDVIDGVEVTCIDNGMPLVMFRAEAVGRTGYEGVAQLNADTDLKARLERLRIACGHAMQ
LGDVTAKNYPKMTLITAPRAGGSITTRSFIPHVCHDAIGVLAAVTVATACVLDGSVTQGIAQVPDGTIKQISVEHPTGEF
SVEIEVDPANPQTVTRAALLRTARLIMRGEAMVPASVWGGKTAGDAALRQAG
>Mature_372_residues
MQTAIPCLFMRGGTSRGPFFNAADLPSDIATRDRVLLAVMGSPDRRQIDGLGGAHPLTSKVGIVAKGSKPGVDLDFLFAQ
LQPDKDSVDTTPNCGNMLAAVVPFALETGLVQPQGDTTTLRVLTLNTDMQCDITVQTPDGHVSYDGDARIDGAPGTSAPI
KINFLDTAGSVAPSLLPTGNVRDVIDGVEVTCIDNGMPLVMFRAEAVGRTGYEGVAQLNADTDLKARLERLRIACGHAMQ
LGDVTAKNYPKMTLITAPRAGGSITTRSFIPHVCHDAIGVLAAVTVATACVLDGSVTQGIAQVPDGTIKQISVEHPTGEF
SVEIEVDPANPQTVTRAALLRTARLIMRGEAMVPASVWGGKTAGDAALRQAG

Specific function: Unknown

COG id: COG2828

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yraM [H]

Homologues:

Organism=Escherichia coli, GI1786985, Length=350, Percent_Identity=46.2857142857143, Blast_Score=322, Evalue=2e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007400 [H]

Pfam domain/function: PF04303 PrpF [H]

EC number: NA

Molecular weight: Translated: 38864; Mature: 38864

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTAIPCLFMRGGTSRGPFFNAADLPSDIATRDRVLLAVMGSPDRRQIDGLGGAHPLTSK
CCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCEEEEEEECCCCHHHHCCCCCCCCCCCC
VGIVAKGSKPGVDLDFLFAQLQPDKDSVDTTPNCGNMLAAVVPFALETGLVQPQGDTTTL
CEEEECCCCCCCCCEEHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
RVLTLNTDMQCDITVQTPDGHVSYDGDARIDGAPGTSAPIKINFLDTAGSVAPSLLPTGN
EEEEECCCCEEEEEEECCCCCEECCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCC
VRDVIDGVEVTCIDNGMPLVMFRAEAVGRTGYEGVAQLNADTDLKARLERLRIACGHAMQ
HHHHHCCCEEEEECCCCEEEEEEEHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCEE
LGDVTAKNYPKMTLITAPRAGGSITTRSFIPHVCHDAIGVLAAVTVATACVLDGSVTQGI
ECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AQVPDGTIKQISVEHPTGEFSVEIEVDPANPQTVTRAALLRTARLIMRGEAMVPASVWGG
HHCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
KTAGDAALRQAG
CCCCHHHHHCCC
>Mature Secondary Structure
MQTAIPCLFMRGGTSRGPFFNAADLPSDIATRDRVLLAVMGSPDRRQIDGLGGAHPLTSK
CCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCEEEEEEECCCCHHHHCCCCCCCCCCCC
VGIVAKGSKPGVDLDFLFAQLQPDKDSVDTTPNCGNMLAAVVPFALETGLVQPQGDTTTL
CEEEECCCCCCCCCEEHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
RVLTLNTDMQCDITVQTPDGHVSYDGDARIDGAPGTSAPIKINFLDTAGSVAPSLLPTGN
EEEEECCCCEEEEEEECCCCCEECCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCC
VRDVIDGVEVTCIDNGMPLVMFRAEAVGRTGYEGVAQLNADTDLKARLERLRIACGHAMQ
HHHHHCCCEEEEECCCCEEEEEEEHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCEE
LGDVTAKNYPKMTLITAPRAGGSITTRSFIPHVCHDAIGVLAAVTVATACVLDGSVTQGI
ECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AQVPDGTIKQISVEHPTGEFSVEIEVDPANPQTVTRAALLRTARLIMRGEAMVPASVWGG
HHCCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
KTAGDAALRQAG
CCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]