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The map label for this gene is 86747994

Identifier: 86747994

GI number: 86747994

Start: 997027

End: 997608

Strand: Reverse

Name: 86747994

Synonym: RPB_0868

Alternate gene names: NA

Gene position: 997608-997027 (Counterclockwise)

Preceding gene: 86747995

Following gene: 86747993

Centisome position: 18.71

GC content: 64.43

Gene sequence:

>582_bases
ATGCTGAGACGAATCTACGACTGGTGCATCGACGCCGCCCACAAGCCCTACGCCCTCTGGATCCTGGCGATGGTCTCCTT
CGCGGAGAGCTCGTTCTTTCCGATCCCGCCGGACGTGATGCTGATCCCGATGTCGCTGGCGCGGCCGGAGCGCGCGTGGT
TCTACGCCGCGCTGTGCACCGTCACCTCGGTCCTCGGCGGCGTGGTCGGCTATGCGATCGGCGCGCTGCTCTACGACTCG
GTCGGCCACTGGCTGATCCAGCTCTACGGCTATGGCGACAAGGTCGAGACCTTCCGCGCCGGCTATGCGGAATGGGGCGC
CTGGATCATCCTGCTGAAGGGCCTCACCCCGATCCCCTACAAGCTCGTCACCATCACCTCCGGCTTCGCCGGCTACGACA
TCTGGCTGTTCATCCTGTTCTCGATCATCGCCCGCGGCGGCCGTTTCTTCGTGGTTGCGATCGTGCTCAACCGTTACGGC
GTGGTGATCCGCGAGCAGATCGAAAAGCGGCTGACGATGTGGGTCACGATCGGTGCGGTGGTGCTGGTGCTCGGCTTCGT
CGTCGCGGTCAAGCTGGTGTGA

Upstream 100 bases:

>100_bases
CGCTCGAGACCCACGCCGCGCGCAAGCGGCGCTGATCGTCTGCCGGCCTCCGTCACAACTGTGGAATGGACAAATCCGCC
CGGGGGTGGTTGATCGCGCC

Downstream 100 bases:

>100_bases
GCCGCCGGTGACTGCACCGTTGCTGATCAGGGCCGCGGTCGCGATCATGTTCGCAGCGGCCGGGCCGGCCGGCGCGCAGA
CATCGCCGCCGCCACCCGAG

Product: DedA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLRRIYDWCIDAAHKPYALWILAMVSFAESSFFPIPPDVMLIPMSLARPERAWFYAALCTVTSVLGGVVGYAIGALLYDS
VGHWLIQLYGYGDKVETFRAGYAEWGAWIILLKGLTPIPYKLVTITSGFAGYDIWLFILFSIIARGGRFFVVAIVLNRYG
VVIREQIEKRLTMWVTIGAVVLVLGFVVAVKLV

Sequences:

>Translated_193_residues
MLRRIYDWCIDAAHKPYALWILAMVSFAESSFFPIPPDVMLIPMSLARPERAWFYAALCTVTSVLGGVVGYAIGALLYDS
VGHWLIQLYGYGDKVETFRAGYAEWGAWIILLKGLTPIPYKLVTITSGFAGYDIWLFILFSIIARGGRFFVVAIVLNRYG
VVIREQIEKRLTMWVTIGAVVLVLGFVVAVKLV
>Mature_193_residues
MLRRIYDWCIDAAHKPYALWILAMVSFAESSFFPIPPDVMLIPMSLARPERAWFYAALCTVTSVLGGVVGYAIGALLYDS
VGHWLIQLYGYGDKVETFRAGYAEWGAWIILLKGLTPIPYKLVTITSGFAGYDIWLFILFSIIARGGRFFVVAIVLNRYG
VVIREQIEKRLTMWVTIGAVVLVLGFVVAVKLV

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21648; Mature: 21648

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRIYDWCIDAAHKPYALWILAMVSFAESSFFPIPPDVMLIPMSLARPERAWFYAALCT
CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHCCCHHHHHHHHHHH
VTSVLGGVVGYAIGALLYDSVGHWLIQLYGYGDKVETFRAGYAEWGAWIILLKGLTPIPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCE
KLVTITSGFAGYDIWLFILFSIIARGGRFFVVAIVLNRYGVVIREQIEKRLTMWVTIGAV
EEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVLGFVVAVKLV
HHHHHHHHHHHCC
>Mature Secondary Structure
MLRRIYDWCIDAAHKPYALWILAMVSFAESSFFPIPPDVMLIPMSLARPERAWFYAALCT
CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHCCCHHHHHHHHHHH
VTSVLGGVVGYAIGALLYDSVGHWLIQLYGYGDKVETFRAGYAEWGAWIILLKGLTPIPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCE
KLVTITSGFAGYDIWLFILFSIIARGGRFFVVAIVLNRYGVVIREQIEKRLTMWVTIGAV
EEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVLGFVVAVKLV
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478068 [H]