Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86747920
Identifier: 86747920
GI number: 86747920
Start: 889904
End: 891883
Strand: Reverse
Name: 86747920
Synonym: RPB_0794
Alternate gene names: NA
Gene position: 891883-889904 (Counterclockwise)
Preceding gene: 86747921
Following gene: 86747919
Centisome position: 16.73
GC content: 66.21
Gene sequence:
>1980_bases ATGACTCATCACCTTCCGTCACCTGCGCCGTCGAGCGGGCTGCTGTCCACTCGCCGGGCGTTTCTGCAATCATCCGCGGC CTTCATCGGCGCGCTGTCCCTCGGATCGTCGCTCGGCGCACCGGCATGGGGCCGCGACCTTCGACGCTACCCGATCGCGA CGCCGGCCGAAACGACCGTGACGCAGATGCTGGCCTTCCCGGCGACGATCGAGCCCGGCCTGGCGAAGACCGCGCTGCAT CAGGTCGCGCGCTACAAGGATTTCGGCTACGGCGAATGGACGCTCGGCTCCGGCCTGCCGATCGTGACGCGCACCGACCT GATGCGAGCCGGCTACGAAAAGCCGGTGGGCGGCGAGAGCAAGCGACTGATCCGGTTCTTCGCGTTCACCGACGTGCACA TCACCGACAAGGAAGCGCCCAACCAGCTGATCGGATTCCAGCAGACCGAGCCCGCGGCGGTGAACAACACCTCGATCTAT TCGCCGGTGATGCCGTACACGACGCAGGTGCTGGACGCAGCGGTGCAGACGGTCAACGACCTGCACAGCCGCGACCCGTT CGATTTCGGCATCGCGCTCGGCGACGCCTGCAACAGCACGTCCTACAATGAAGTGCGCTGGTACATCGACGTGCTCGACG GCCAGCCGATCACGCCGAGCTCCGGCGACCATCGCGGCCGCGACAGCGTCGACTTCCAGATGCCGTTTCAGGCCGCCGGT CTCGCCGCGGATCTGCCCTGGTATCAGGTCCTCGGCAACCACGATCATTTCATGATCGGCTCGTTTCCGGTCGATGCCGA TCCGACGATCGGGCTACGGCAGTCCTACACGGCCGACAGGATCTGGGCGGTCGGCGACGTGCTGAAGCCCAATCGCGAAG GCTTCCCGGCGCTGTTCGACTATCGCGGCCTCAAGGCCACGCCGGCGTACTATCCGGGAGTGATCGACGGCGCGAGCCCG TATGGCGCGATCATTCATACCGGCCGCGCCGACGATCCGGCCTTCGCCGGCAAGCCGCCGCAGATCGCCGCCGATCCCGG CCGCCGTCCGCTGGCGCGCGCCGAATGGCTCGCCGAATTCCGCAACACCACGACGCGTCCGAAGGGGCACGGCTTCGATC TGATCGACGGCGCCGGCGACGGCTTCGCCTGCTACAGCTTCGTACCGAAATCCAACCTGCCGCTGAAGGTGATCGTGCTC GACGTCACCCAGTCCGAACAGGACGGCTCGCGCGACATCCACGGCCACGGCTTTCTCGATGCCAGGCGCTGGGACTGGCT GAAGGCCGAGCTGGCGCGCGGCCAGGCCGACGATCAGCTGATGATCATCGCCAACCACATTCCGATCGGGGTGTCGCCGA TCGGCTCCGAAATGGAATGGTGGCTGGGCGACGCCAATGCGGCGCCTGATTTTGCCAACGCCGTCGACCTCGCCGGCCTG GTGACGACGCTGCAGGCTGCGCCGAACCTGCTGATGTGGATCGCCGGGCATCGCCATTTGAATGTGGTGAAGGCGTTCCC CTCCGCCGACCCGGACCGGCCGGAGCAGGGCTTCTGGCAGGTCGAGACCTGCTCGCTGCGCGACTTTCCGCAGCAATTCC GGACTTTCGAGATCAGGCTCAACGCGGACGACACGGTGTCGATCGAGGCGATGAATGTCGATATCGCCGTCGCCGACGGC ACGCCGGCGGCGCAATCGCGCAAATACGCCATCGCCACCCAGCAGATCATCCAGAACGACCTGCGGCCCAACAGCCCGAA CTACGCGACCGCCGGCGGCAAGATTCCGGTGCCGAGCATGGACCCGACGCGGCCGCAGAGCGACGATCCCAAAGCCACCG ATCCGTCGATCCGGTTCGTCGATCTGAGAAGCGCGGACAAGCCGGTCCAGTATCATGCGTCGAGCAATGTCGCACTGCTG AAGCAGCTCAGCCCGCGGATGGTCGAGGTGCTGGAGCGGAGGGTGGCGATGCGGAAGTAG
Upstream 100 bases:
>100_bases GCTGTTCGAACGGCCGATGGCATCGATGCGTTCGCACGCAGGATGACATGACGCGACGCCGTCGCGTCGCTCTGGATGGC CGCGCAAGAGGGCCTGTCCC
Downstream 100 bases:
>100_bases TCGCGATCACGGACCGGATGATTTCCTCACCGGTTCGGACTATACTCGGGCCATGCACGATGCGGTCGCCGATATTGCAG ACGACGTTCGGCTTCGCGAA
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Tat Pathway Signal Sequence Domain-Containing Protein; Calcineurin-Like Phosphoesterase; Metallo-PhosphoesteraseTat Pathway Signal; Geranylgeranylglyceryl Phosphate Synthase Family Protein
Number of amino acids: Translated: 659; Mature: 658
Protein sequence:
>659_residues MTHHLPSPAPSSGLLSTRRAFLQSSAAFIGALSLGSSLGAPAWGRDLRRYPIATPAETTVTQMLAFPATIEPGLAKTALH QVARYKDFGYGEWTLGSGLPIVTRTDLMRAGYEKPVGGESKRLIRFFAFTDVHITDKEAPNQLIGFQQTEPAAVNNTSIY SPVMPYTTQVLDAAVQTVNDLHSRDPFDFGIALGDACNSTSYNEVRWYIDVLDGQPITPSSGDHRGRDSVDFQMPFQAAG LAADLPWYQVLGNHDHFMIGSFPVDADPTIGLRQSYTADRIWAVGDVLKPNREGFPALFDYRGLKATPAYYPGVIDGASP YGAIIHTGRADDPAFAGKPPQIAADPGRRPLARAEWLAEFRNTTTRPKGHGFDLIDGAGDGFACYSFVPKSNLPLKVIVL DVTQSEQDGSRDIHGHGFLDARRWDWLKAELARGQADDQLMIIANHIPIGVSPIGSEMEWWLGDANAAPDFANAVDLAGL VTTLQAAPNLLMWIAGHRHLNVVKAFPSADPDRPEQGFWQVETCSLRDFPQQFRTFEIRLNADDTVSIEAMNVDIAVADG TPAAQSRKYAIATQQIIQNDLRPNSPNYATAGGKIPVPSMDPTRPQSDDPKATDPSIRFVDLRSADKPVQYHASSNVALL KQLSPRMVEVLERRVAMRK
Sequences:
>Translated_659_residues MTHHLPSPAPSSGLLSTRRAFLQSSAAFIGALSLGSSLGAPAWGRDLRRYPIATPAETTVTQMLAFPATIEPGLAKTALH QVARYKDFGYGEWTLGSGLPIVTRTDLMRAGYEKPVGGESKRLIRFFAFTDVHITDKEAPNQLIGFQQTEPAAVNNTSIY SPVMPYTTQVLDAAVQTVNDLHSRDPFDFGIALGDACNSTSYNEVRWYIDVLDGQPITPSSGDHRGRDSVDFQMPFQAAG LAADLPWYQVLGNHDHFMIGSFPVDADPTIGLRQSYTADRIWAVGDVLKPNREGFPALFDYRGLKATPAYYPGVIDGASP YGAIIHTGRADDPAFAGKPPQIAADPGRRPLARAEWLAEFRNTTTRPKGHGFDLIDGAGDGFACYSFVPKSNLPLKVIVL DVTQSEQDGSRDIHGHGFLDARRWDWLKAELARGQADDQLMIIANHIPIGVSPIGSEMEWWLGDANAAPDFANAVDLAGL VTTLQAAPNLLMWIAGHRHLNVVKAFPSADPDRPEQGFWQVETCSLRDFPQQFRTFEIRLNADDTVSIEAMNVDIAVADG TPAAQSRKYAIATQQIIQNDLRPNSPNYATAGGKIPVPSMDPTRPQSDDPKATDPSIRFVDLRSADKPVQYHASSNVALL KQLSPRMVEVLERRVAMRK >Mature_658_residues THHLPSPAPSSGLLSTRRAFLQSSAAFIGALSLGSSLGAPAWGRDLRRYPIATPAETTVTQMLAFPATIEPGLAKTALHQ VARYKDFGYGEWTLGSGLPIVTRTDLMRAGYEKPVGGESKRLIRFFAFTDVHITDKEAPNQLIGFQQTEPAAVNNTSIYS PVMPYTTQVLDAAVQTVNDLHSRDPFDFGIALGDACNSTSYNEVRWYIDVLDGQPITPSSGDHRGRDSVDFQMPFQAAGL AADLPWYQVLGNHDHFMIGSFPVDADPTIGLRQSYTADRIWAVGDVLKPNREGFPALFDYRGLKATPAYYPGVIDGASPY GAIIHTGRADDPAFAGKPPQIAADPGRRPLARAEWLAEFRNTTTRPKGHGFDLIDGAGDGFACYSFVPKSNLPLKVIVLD VTQSEQDGSRDIHGHGFLDARRWDWLKAELARGQADDQLMIIANHIPIGVSPIGSEMEWWLGDANAAPDFANAVDLAGLV TTLQAAPNLLMWIAGHRHLNVVKAFPSADPDRPEQGFWQVETCSLRDFPQQFRTFEIRLNADDTVSIEAMNVDIAVADGT PAAQSRKYAIATQQIIQNDLRPNSPNYATAGGKIPVPSMDPTRPQSDDPKATDPSIRFVDLRSADKPVQYHASSNVALLK QLSPRMVEVLERRVAMRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72053; Mature: 71922
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHHLPSPAPSSGLLSTRRAFLQSSAAFIGALSLGSSLGAPAWGRDLRRYPIATPAETTV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHH TQMLAFPATIEPGLAKTALHQVARYKDFGYGEWTLGSGLPIVTRTDLMRAGYEKPVGGES HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCEEEHHHHHHCCCCCCCCCCH KRLIRFFAFTDVHITDKEAPNQLIGFQQTEPAAVNNTSIYSPVMPYTTQVLDAAVQTVND HHEEEEEEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LHSRDPFDFGIALGDACNSTSYNEVRWYIDVLDGQPITPSSGDHRGRDSVDFQMPFQAAG HHCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEECCHHHCC LAADLPWYQVLGNHDHFMIGSFPVDADPTIGLRQSYTADRIWAVGDVLKPNREGFPALFD CCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHEEHHCCCCCCCCCCCHHEE YRGLKATPAYYPGVIDGASPYGAIIHTGRADDPAFAGKPPQIAADPGRRPLARAEWLAEF CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH RNTTTRPKGHGFDLIDGAGDGFACYSFVPKSNLPLKVIVLDVTQSEQDGSRDIHGHGFLD HCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC ARRWDWLKAELARGQADDQLMIIANHIPIGVSPIGSEMEWWLGDANAAPDFANAVDLAGL CHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH VTTLQAAPNLLMWIAGHRHLNVVKAFPSADPDRPEQGFWQVETCSLRDFPQQFRTFEIRL HHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHCCCEEEEEE NADDTVSIEAMNVDIAVADGTPAAQSRKYAIATQQIIQNDLRPNSPNYATAGGKIPVPSM CCCCEEEEEEEEEEEEEECCCCCHHCCEEHHHHHHHHHHCCCCCCCCEECCCCCCCCCCC DPTRPQSDDPKATDPSIRFVDLRSADKPVQYHASSNVALLKQLSPRMVEVLERRVAMRK CCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure THHLPSPAPSSGLLSTRRAFLQSSAAFIGALSLGSSLGAPAWGRDLRRYPIATPAETTV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHH TQMLAFPATIEPGLAKTALHQVARYKDFGYGEWTLGSGLPIVTRTDLMRAGYEKPVGGES HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCEEEHHHHHHCCCCCCCCCCH KRLIRFFAFTDVHITDKEAPNQLIGFQQTEPAAVNNTSIYSPVMPYTTQVLDAAVQTVND HHEEEEEEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LHSRDPFDFGIALGDACNSTSYNEVRWYIDVLDGQPITPSSGDHRGRDSVDFQMPFQAAG HHCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEECCHHHCC LAADLPWYQVLGNHDHFMIGSFPVDADPTIGLRQSYTADRIWAVGDVLKPNREGFPALFD CCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHEEHHCCCCCCCCCCCHHEE YRGLKATPAYYPGVIDGASPYGAIIHTGRADDPAFAGKPPQIAADPGRRPLARAEWLAEF CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH RNTTTRPKGHGFDLIDGAGDGFACYSFVPKSNLPLKVIVLDVTQSEQDGSRDIHGHGFLD HCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC ARRWDWLKAELARGQADDQLMIIANHIPIGVSPIGSEMEWWLGDANAAPDFANAVDLAGL CHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH VTTLQAAPNLLMWIAGHRHLNVVKAFPSADPDRPEQGFWQVETCSLRDFPQQFRTFEIRL HHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHCCCEEEEEE NADDTVSIEAMNVDIAVADGTPAAQSRKYAIATQQIIQNDLRPNSPNYATAGGKIPVPSM CCCCEEEEEEEEEEEEEECCCCCHHCCEEHHHHHHHHHHCCCCCCCCEECCCCCCCCCCC DPTRPQSDDPKATDPSIRFVDLRSADKPVQYHASSNVALLKQLSPRMVEVLERRVAMRK CCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA