Click here to switch to the map view.

The map label for this gene is ycbL [H]

Identifier: 86747841

GI number: 86747841

Start: 802426

End: 803094

Strand: Reverse

Name: ycbL [H]

Synonym: RPB_0715

Alternate gene names: 86747841

Gene position: 803094-802426 (Counterclockwise)

Preceding gene: 86747842

Following gene: 86747840

Centisome position: 15.06

GC content: 66.97

Gene sequence:

>669_bases
ATGAGCACTGCATCCGACACCAAAGCCAAAGCTGGCGCCGCCATCATCCCGGTCACGCCATTCCAGCAGAACTGCACGCT
GTTGTGGTGCGAGGCCACCCGCAAGGCGGTGGTCGTGGATCCCGGCGGCGACGTCCCCGAAATTCTGGCCGCGATCGAGA
AGACCGGCGTCAGCGTCGAGAAGATCTGGCTGACGCACGGCCACATCGACCACGTCGGCGGCGCGGCCGAATTGCGCGAC
GCGCTGAAGGTGCCGATCGAAGGCCCGCATCGCGACGACCAGTTCCTGCTCGACAACGTCGTCGCTAGCGGCCGCAGCTT
CGGCATCGCCGGCGTCCGCGACGTCACCACGGATCGCTGGCTGGACCAGGGCGACAGCGTCAGCGTCGGCGAGTTGACGT
TCCAGATCCTGCATTGTCCCGGACATTCGCCGGGTAGCGTGGTGTTCTTCAACGAGGCGATGCGGTTCGCGCTGGTCGGT
GACGTGCTGTTCGCCGGCTCGGTCGGGCGCACCGACCTGCCCGGCGGCAGCCACGCCACGCTGATCCGATCGATCACCGA
CAAGCTGCTGCCGCTCGGCGACGATGTCGGCTTCATCTGCGGCCATGGGCCCGGCTCGAGCATCGGCCAGGAGCGCATGA
CCAATCCGTTCCTGACCGGCGCGATGTAG

Upstream 100 bases:

>100_bases
CTTCTTCCCCCCGTGGGAGAGGATTCACGCGCTTGCAATGACGACAATCCAGCCCTGCCCCCACTTTGACTTGCCGCGGC
GGAGGCGGCAAAGTGCGGCG

Downstream 100 bases:

>100_bases
CGTCGGTCTCCCGCAGGCATTGTTCACATTCGATTCCGACCACCGCCCCGCGCGCAGCGGCGGAGTGCATCCGCGTGCGA
TCGCCGCGACGCCTGCCATT

Product: Beta-lactamase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSTASDTKAKAGAAIIPVTPFQQNCTLLWCEATRKAVVVDPGGDVPEILAAIEKTGVSVEKIWLTHGHIDHVGGAAELRD
ALKVPIEGPHRDDQFLLDNVVASGRSFGIAGVRDVTTDRWLDQGDSVSVGELTFQILHCPGHSPGSVVFFNEAMRFALVG
DVLFAGSVGRTDLPGGSHATLIRSITDKLLPLGDDVGFICGHGPGSSIGQERMTNPFLTGAM

Sequences:

>Translated_222_residues
MSTASDTKAKAGAAIIPVTPFQQNCTLLWCEATRKAVVVDPGGDVPEILAAIEKTGVSVEKIWLTHGHIDHVGGAAELRD
ALKVPIEGPHRDDQFLLDNVVASGRSFGIAGVRDVTTDRWLDQGDSVSVGELTFQILHCPGHSPGSVVFFNEAMRFALVG
DVLFAGSVGRTDLPGGSHATLIRSITDKLLPLGDDVGFICGHGPGSSIGQERMTNPFLTGAM
>Mature_221_residues
STASDTKAKAGAAIIPVTPFQQNCTLLWCEATRKAVVVDPGGDVPEILAAIEKTGVSVEKIWLTHGHIDHVGGAAELRDA
LKVPIEGPHRDDQFLLDNVVASGRSFGIAGVRDVTTDRWLDQGDSVSVGELTFQILHCPGHSPGSVVFFNEAMRFALVGD
VLFAGSVGRTDLPGGSHATLIRSITDKLLPLGDDVGFICGHGPGSSIGQERMTNPFLTGAM

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Homo sapiens, GI41327741, Length=218, Percent_Identity=27.5229357798165, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1787158, Length=208, Percent_Identity=54.3269230769231, Blast_Score=247, Evalue=4e-67,
Organism=Caenorhabditis elegans, GI17538952, Length=200, Percent_Identity=27.5, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23381; Mature: 23250

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTASDTKAKAGAAIIPVTPFQQNCTLLWCEATRKAVVVDPGGDVPEILAAIEKTGVSVE
CCCCCCCHHHCCEEEEECCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHCCCEEE
KIWLTHGHIDHVGGAAELRDALKVPIEGPHRDDQFLLDNVVASGRSFGIAGVRDVTTDRW
EEEEECCCHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
LDQGDSVSVGELTFQILHCPGHSPGSVVFFNEAMRFALVGDVLFAGSVGRTDLPGGSHAT
HCCCCCEEHHHEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
LIRSITDKLLPLGDDVGFICGHGPGSSIGQERMTNPFLTGAM
HHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
STASDTKAKAGAAIIPVTPFQQNCTLLWCEATRKAVVVDPGGDVPEILAAIEKTGVSVE
CCCCCCHHHCCEEEEECCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHCCCEEE
KIWLTHGHIDHVGGAAELRDALKVPIEGPHRDDQFLLDNVVASGRSFGIAGVRDVTTDRW
EEEEECCCHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
LDQGDSVSVGELTFQILHCPGHSPGSVVFFNEAMRFALVGDVLFAGSVGRTDLPGGSHAT
HCCCCCEEHHHEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
LIRSITDKLLPLGDDVGFICGHGPGSSIGQERMTNPFLTGAM
HHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]