| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is purC2 [H]
Identifier: 86747828
GI number: 86747828
Start: 788071
End: 788988
Strand: Reverse
Name: purC2 [H]
Synonym: RPB_0702
Alternate gene names: 86747828
Gene position: 788988-788071 (Counterclockwise)
Preceding gene: 86747829
Following gene: 86747827
Centisome position: 14.8
GC content: 68.74
Gene sequence:
>918_bases ATGACCACGATGCTCTCGAGCGACCTGCCGCTGCCGAAGATCGGCCGCGGCAAGGTGCGCGACATCTATGCCGTCGACGC CGACCGGCTGCTGCTGGTGACCACCGACCGGATCAGCGCCTTCGACGTGGTGATGGCCGAGACCATCCCGATGAAGGGCG CGGTGCTGACGCAGATCAGCGCCTGGTGGTTCGACCAGCTCGGCGGCGTGGTGCCGCACCACATGATCAGCGCCGACACC GCCGAGATCGTCGACGCCGTGCCGGCGCTGCAGGATCATCGCGCGACCCTCGCCGGCCGGACCATGCTGTGCCGGCGCAC CACCGTGTTTCCGGTCGAATGCGTCATCCGCGGCTACATCACCGGTTCGGCCTGGAAGGAATACGCCGCGACCGGCACGC TGGCCGGCGAGCCGCTGCCCGAGGGCCTGCAGGAAAGCGAGCATCTTCCCGCGCCGATCTTCTCGCCGGCGACCAAGGCC GAGACCGGCCATGACGAGAACATCACCATCGCCCGAATGCGCGCCATCGTCGGCGACGAAGACGCCTATACGCTGGAGAG CATGACGCGCGCGGTCTACACCCAAGGCGAGGCGATCGCCCGCGAGCAGGGCATCATCATCGCCGACACCAAATTCGAAT TCGGCCGCGACGCCGACGGCCGGATCATTCTGATCGACGAGGTGATGACGCCGGATTCGTCGCGGTTCTGGGCCGCCGAC GCCTACCAGCCGGGCCGGCCGCAGCCGTCTTTCGACAAGCAGCCGCTGCGCGACCATCTCGACGCCGAGCGCCGCGCCGG CCGCTGGAACGGCGAAGCGCCGCCGCCGAAACTGCCCGACGTGGTGGTCGCTGCAACCAGCGCGCGCTATCTCGACGCCT ATCGCCGGCTGACGGGCGCCGATCTCGCGATCTCCTGA
Upstream 100 bases:
>100_bases CGAGAGCGAGTTCATTCCGCTGCCGGAATGATACACTCTCCGCTCCCATCGTTCCGCGCCGCCGGCCTGCCGGCGACGCC TGTCGCCTGAAAGACCGCCC
Downstream 100 bases:
>100_bases CATGACGTAGCGCAAGGCGGCGCCGGGTGCGGCGGGCATTGATCGCCCGAGATGACTGCCTCTGGAGAAGACCCATGCCG ACCCAGAACACGGTGCTGAT
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase 2 [H]
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTTMLSSDLPLPKIGRGKVRDIYAVDADRLLLVTTDRISAFDVVMAETIPMKGAVLTQISAWWFDQLGGVVPHHMISADT AEIVDAVPALQDHRATLAGRTMLCRRTTVFPVECVIRGYITGSAWKEYAATGTLAGEPLPEGLQESEHLPAPIFSPATKA ETGHDENITIARMRAIVGDEDAYTLESMTRAVYTQGEAIAREQGIIIADTKFEFGRDADGRIILIDEVMTPDSSRFWAAD AYQPGRPQPSFDKQPLRDHLDAERRAGRWNGEAPPPKLPDVVVAATSARYLDAYRRLTGADLAIS
Sequences:
>Translated_305_residues MTTMLSSDLPLPKIGRGKVRDIYAVDADRLLLVTTDRISAFDVVMAETIPMKGAVLTQISAWWFDQLGGVVPHHMISADT AEIVDAVPALQDHRATLAGRTMLCRRTTVFPVECVIRGYITGSAWKEYAATGTLAGEPLPEGLQESEHLPAPIFSPATKA ETGHDENITIARMRAIVGDEDAYTLESMTRAVYTQGEAIAREQGIIIADTKFEFGRDADGRIILIDEVMTPDSSRFWAAD AYQPGRPQPSFDKQPLRDHLDAERRAGRWNGEAPPPKLPDVVVAATSARYLDAYRRLTGADLAIS >Mature_304_residues TTMLSSDLPLPKIGRGKVRDIYAVDADRLLLVTTDRISAFDVVMAETIPMKGAVLTQISAWWFDQLGGVVPHHMISADTA EIVDAVPALQDHRATLAGRTMLCRRTTVFPVECVIRGYITGSAWKEYAATGTLAGEPLPEGLQESEHLPAPIFSPATKAE TGHDENITIARMRAIVGDEDAYTLESMTRAVYTQGEAIAREQGIIIADTKFEFGRDADGRIILIDEVMTPDSSRFWAADA YQPGRPQPSFDKQPLRDHLDAERRAGRWNGEAPPPKLPDVVVAATSARYLDAYRRLTGADLAIS
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=296, Percent_Identity=47.972972972973, Blast_Score=269, Evalue=5e-73,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 33419; Mature: 33288
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS01057 SAICAR_SYNTHETASE_1 ; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMLSSDLPLPKIGRGKVRDIYAVDADRLLLVTTDRISAFDVVMAETIPMKGAVLTQIS CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHH AWWFDQLGGVVPHHMISADTAEIVDAVPALQDHRATLAGRTMLCRRTTVFPVECVIRGYI HHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHC TGSAWKEYAATGTLAGEPLPEGLQESEHLPAPIFSPATKAETGHDENITIARMRAIVGDE CCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHEEHHHHHCCC DAYTLESMTRAVYTQGEAIAREQGIIIADTKFEFGRDADGRIILIDEVMTPDSSRFWAAD CHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEC AYQPGRPQPSFDKQPLRDHLDAERRAGRWNGEAPPPKLPDVVVAATSARYLDAYRRLTGA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCC DLAIS CEECC >Mature Secondary Structure TTMLSSDLPLPKIGRGKVRDIYAVDADRLLLVTTDRISAFDVVMAETIPMKGAVLTQIS CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHH AWWFDQLGGVVPHHMISADTAEIVDAVPALQDHRATLAGRTMLCRRTTVFPVECVIRGYI HHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHC TGSAWKEYAATGTLAGEPLPEGLQESEHLPAPIFSPATKAETGHDENITIARMRAIVGDE CCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHEEHHHHHCCC DAYTLESMTRAVYTQGEAIAREQGIIIADTKFEFGRDADGRIILIDEVMTPDSSRFWAAD CHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEC AYQPGRPQPSFDKQPLRDHLDAERRAGRWNGEAPPPKLPDVVVAATSARYLDAYRRLTGA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCC DLAIS CEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]