| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747807
Identifier: 86747807
GI number: 86747807
Start: 765658
End: 766026
Strand: Reverse
Name: 86747807
Synonym: RPB_0681
Alternate gene names: NA
Gene position: 766026-765658 (Counterclockwise)
Preceding gene: 86747808
Following gene: 86747806
Centisome position: 14.37
GC content: 74.53
Gene sequence:
>369_bases ATGGCTGTCTTTGTCCGCCTCGCGATCGTGATCGCCGGCCTGTATGGCGCCGCCGGCGTCGCGCTGGCGGCCGCCGCCGC CCATGTCCCCGATGCCGCGCGGCTCGGCCCGGCCTCGTCGATGCTGCTGTTTCACGCCAGCGCGATCCTCGCGGCCGCCC TGCTGGCCGACCGCGGCCTCGTCCACCGCATCCCCGGCCTCGCCGCCAGCTTCGGCTTCGTGCTCGGCACCGCGCTGTTC GCCGGCGACCTGTCGCTGCGGCAGTTTGCCGGCCAGTCGCTGTTTCCGATGGCGGCGCCGACCGGCGGCATGCTGCTGAT CGGAAGCTGGCTGCTGCTGGCGGTCGCGGCGCTGCTGGCGCGGCGCTAG
Upstream 100 bases:
>100_bases CCGCCGCTTTCCCCGAATTGCTGACGACGTCGTCGCGCACCGGCGCCGGAATGCCCGAGCTGCGCGCCGCGATGATCCGC CTGCTCGACGAGCGCCGCTG
Downstream 100 bases:
>100_bases CGACAGACACGGGCTGCGGATTCGGCCCCTTTGATCGGCCGCGCCGAAATGCTAGCGATTCTCCCCGCCAAGCCTGCCCC AAGAATCGTACCGCCCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MAVFVRLAIVIAGLYGAAGVALAAAAAHVPDAARLGPASSMLLFHASAILAAALLADRGLVHRIPGLAASFGFVLGTALF AGDLSLRQFAGQSLFPMAAPTGGMLLIGSWLLLAVAALLARR
Sequences:
>Translated_122_residues MAVFVRLAIVIAGLYGAAGVALAAAAAHVPDAARLGPASSMLLFHASAILAAALLADRGLVHRIPGLAASFGFVLGTALF AGDLSLRQFAGQSLFPMAAPTGGMLLIGSWLLLAVAALLARR >Mature_121_residues AVFVRLAIVIAGLYGAAGVALAAAAAHVPDAARLGPASSMLLFHASAILAAALLADRGLVHRIPGLAASFGFVLGTALFA GDLSLRQFAGQSLFPMAAPTGGMLLIGSWLLLAVAALLARR
Specific function: Unknown
COG id: COG2363
COG function: function code S; Uncharacterized small membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12233; Mature: 12102
Theoretical pI: Translated: 12.11; Mature: 12.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFVRLAIVIAGLYGAAGVALAAAAAHVPDAARLGPASSMLLFHASAILAAALLADRGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCH VHRIPGLAASFGFVLGTALFAGDLSLRQFAGQSLFPMAAPTGGMLLIGSWLLLAVAALLA HHHCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RR CC >Mature Secondary Structure AVFVRLAIVIAGLYGAAGVALAAAAAHVPDAARLGPASSMLLFHASAILAAALLADRGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCH VHRIPGLAASFGFVLGTALFAGDLSLRQFAGQSLFPMAAPTGGMLLIGSWLLLAVAALLA HHHCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA