| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is coaBC [H]
Identifier: 86747748
GI number: 86747748
Start: 701603
End: 703060
Strand: Direct
Name: coaBC [H]
Synonym: RPB_0622
Alternate gene names: 86747748
Gene position: 701603-703060 (Clockwise)
Preceding gene: 86747747
Following gene: 86747749
Centisome position: 13.16
GC content: 68.52
Gene sequence:
>1458_bases ATGGCCAACCTGACGATCCGCAAACTCGACGACGCCCTCAAGGCCGAGCTGCGCCAGCGCGCGGCCGGCAACGGCCGCTC GATGGAAGATGAGGTTCGCGTCATCCTGCGCGACGCGGTCCACCAGCGCCACGGGTTTGCCACCAGTTTGCCGCAAGCCG GCGGCGCCGCCGCCGAGCCCGGTCCGGGTGACGTAAGTCCCGAAAATCAAACGGCTTTTGTCTCCGACCGCCCTTCGACC GCCCGCATCACGCTGATCGTCGGCGGCGGCATCGCCGCCTACAAGGCGATGGATTTGATTCGTCGCCTGAAAGAGCGCGG CGCCGAGGTTCGCGTCGTGCTCACCAAGGCCGCACAGCACTTCGTCACGCCGCTCACCGCGAGCGCGCTGTCGCATCAGC GCTGCTACACCGATCTGTTCGACCCGCAGAGCGAGTTCGATGCCGGCCATATCAGGCTGGCGCGCGATTGCGATCTGATC GTGGTTGCGCCCGCCACCGCGGACCTGATGGCCAAGATCGCGAATGGCCACGCAGACGATCTGGCCACCGCGATCCTGCT GGCGACTAATCGCCAGGTCCTGCTCGCGCCTGCGATGAATCCGCTGATGTGGGCCAACGCCGCGACCCGCCGCAATGTCG ATCAGTTGAAGCGCGACGGCATCGTCCTGGTCGGCCCCAATGCCGGCGAGATGGCCGAGCGCAATGAAGCCGGCACCGGC CGGATGGCCGAGCCGGTTGAAATCGCTGCTGCCGCACAGGCACTTCTGGCGCCGCCGTCACCGCGTCCGCTGCTCGGCCG GCGCGTGCTGATCACCGCGGGGCCGACCCACGAGCCGATCGATCCGGTGCGCTACATCGCCAACCGCTCCTCCGGCAAGC AGGGCTACGCCATCGCCGCCGCGGCGGCCGCGGCCGGCGCCGAGGTGGTGCTGATCTCCGGCCCGGTCGATCTACGCGCC CCCGACGGCGTGACGCTGACGCGTGTGGAGTCCGCGCGCGACATGCTGGATGCGGTGGAAGCCGCGCTGCCCGCCGACAT CGCGATCTTCGCCGCCGCCGTCGCCGACTGGCGCGTCGCCAGCGAAGGCGGTCAGAAGATCAAGAAGGGCGAAGGCGGCC CGCCGCCGCTGCAACTCACCGAGAACCCCGACATCCTGGCGACGGTCGCGAAGCTCGGCGACGACCGCCCGCCGCTGGTG ATCGGCTTCGCCGCCGAGACCGAGAATCTGCTCGCCAATGCCAGGTCGAAACTCGCCCGCAAGGGCTGCGACTGGATCGT CGCCAACGACGTCTCGGCCGCCGGCGGGGTCATGGGCGGCGACCGCAACACCGTGCATCTGCTGACGAAATCGGCCGACA CCGTCGATGTGGAGTCGTGGCCTTTGATGACCAAGGACGACGTCGCAACCGCGCTGGTCGCGCGAATCGCGCGAGAACTG GAAGTACACCAATCATGA
Upstream 100 bases:
>100_bases GGCATTGCAGGCATTTGATGACTGCAGTGAATGCGCTCTGCGATGACCGCATCGCGGTCGTATATTGCTTGCGTTGCCTG CATCCGCTAGTCTGCCGGCC
Downstream 100 bases:
>100_bases GCCCCGCCATCGCCGTCGAGATCAAGCGCCTGCCCCACGCCGAAGGCCTGCCGCTGCCCGCGTATCAGTCCGCGCACGCC GCCGGTCTCGATCTGTGCGC
Product: bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MANLTIRKLDDALKAELRQRAAGNGRSMEDEVRVILRDAVHQRHGFATSLPQAGGAAAEPGPGDVSPENQTAFVSDRPST ARITLIVGGGIAAYKAMDLIRRLKERGAEVRVVLTKAAQHFVTPLTASALSHQRCYTDLFDPQSEFDAGHIRLARDCDLI VVAPATADLMAKIANGHADDLATAILLATNRQVLLAPAMNPLMWANAATRRNVDQLKRDGIVLVGPNAGEMAERNEAGTG RMAEPVEIAAAAQALLAPPSPRPLLGRRVLITAGPTHEPIDPVRYIANRSSGKQGYAIAAAAAAAGAEVVLISGPVDLRA PDGVTLTRVESARDMLDAVEAALPADIAIFAAAVADWRVASEGGQKIKKGEGGPPPLQLTENPDILATVAKLGDDRPPLV IGFAAETENLLANARSKLARKGCDWIVANDVSAAGGVMGGDRNTVHLLTKSADTVDVESWPLMTKDDVATALVARIAREL EVHQS
Sequences:
>Translated_485_residues MANLTIRKLDDALKAELRQRAAGNGRSMEDEVRVILRDAVHQRHGFATSLPQAGGAAAEPGPGDVSPENQTAFVSDRPST ARITLIVGGGIAAYKAMDLIRRLKERGAEVRVVLTKAAQHFVTPLTASALSHQRCYTDLFDPQSEFDAGHIRLARDCDLI VVAPATADLMAKIANGHADDLATAILLATNRQVLLAPAMNPLMWANAATRRNVDQLKRDGIVLVGPNAGEMAERNEAGTG RMAEPVEIAAAAQALLAPPSPRPLLGRRVLITAGPTHEPIDPVRYIANRSSGKQGYAIAAAAAAAGAEVVLISGPVDLRA PDGVTLTRVESARDMLDAVEAALPADIAIFAAAVADWRVASEGGQKIKKGEGGPPPLQLTENPDILATVAKLGDDRPPLV IGFAAETENLLANARSKLARKGCDWIVANDVSAAGGVMGGDRNTVHLLTKSADTVDVESWPLMTKDDVATALVARIAREL EVHQS >Mature_484_residues ANLTIRKLDDALKAELRQRAAGNGRSMEDEVRVILRDAVHQRHGFATSLPQAGGAAAEPGPGDVSPENQTAFVSDRPSTA RITLIVGGGIAAYKAMDLIRRLKERGAEVRVVLTKAAQHFVTPLTASALSHQRCYTDLFDPQSEFDAGHIRLARDCDLIV VAPATADLMAKIANGHADDLATAILLATNRQVLLAPAMNPLMWANAATRRNVDQLKRDGIVLVGPNAGEMAERNEAGTGR MAEPVEIAAAAQALLAPPSPRPLLGRRVLITAGPTHEPIDPVRYIANRSSGKQGYAIAAAAAAAGAEVVLISGPVDLRAP DGVTLTRVESARDMLDAVEAALPADIAIFAAAVADWRVASEGGQKIKKGEGGPPPLQLTENPDILATVAKLGDDRPPLVI GFAAETENLLANARSKLARKGCDWIVANDVSAAGGVMGGDRNTVHLLTKSADTVDVESWPLMTKDDVATALVARIARELE VHQS
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=169, Percent_Identity=35.5029585798817, Blast_Score=80, Evalue=5e-15, Organism=Escherichia coli, GI87082301, Length=377, Percent_Identity=46.9496021220159, Blast_Score=279, Evalue=2e-76, Organism=Caenorhabditis elegans, GI17560194, Length=198, Percent_Identity=31.3131313131313, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 51077; Mature: 50946
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLTIRKLDDALKAELRQRAAGNGRSMEDEVRVILRDAVHQRHGFATSLPQAGGAAAEP CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GPGDVSPENQTAFVSDRPSTARITLIVGGGIAAYKAMDLIRRLKERGAEVRVVLTKAAQH CCCCCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEHHHHH FVTPLTASALSHQRCYTDLFDPQSEFDAGHIRLARDCDLIVVAPATADLMAKIANGHADD HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCEEEECCCHHHHHHHHHCCCHHH LATAILLATNRQVLLAPAMNPLMWANAATRRNVDQLKRDGIVLVGPNAGEMAERNEAGTG HHHHHHEECCCCEEEECCCCCHHHCCCHHHCCHHHHHHCCEEEECCCCCCHHHCCCCCCC RMAEPVEIAAAAQALLAPPSPRPLLGRRVLITAGPTHEPIDPVRYIANRSSGKQGYAIAA CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCEEEEE AAAAAGAEVVLISGPVDLRAPDGVTLTRVESARDMLDAVEAALPADIAIFAAAVADWRVA HHHHCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SEGGQKIKKGEGGPPPLQLTENPDILATVAKLGDDRPPLVIGFAAETENLLANARSKLAR CCCCHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH KGCDWIVANDVSAAGGVMGGDRNTVHLLTKSADTVDVESWPLMTKDDVATALVARIAREL CCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHH EVHQS HHCCC >Mature Secondary Structure ANLTIRKLDDALKAELRQRAAGNGRSMEDEVRVILRDAVHQRHGFATSLPQAGGAAAEP CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GPGDVSPENQTAFVSDRPSTARITLIVGGGIAAYKAMDLIRRLKERGAEVRVVLTKAAQH CCCCCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEHHHHH FVTPLTASALSHQRCYTDLFDPQSEFDAGHIRLARDCDLIVVAPATADLMAKIANGHADD HHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCEEEECCCHHHHHHHHHCCCHHH LATAILLATNRQVLLAPAMNPLMWANAATRRNVDQLKRDGIVLVGPNAGEMAERNEAGTG HHHHHHEECCCCEEEECCCCCHHHCCCHHHCCHHHHHHCCEEEECCCCCCHHHCCCCCCC RMAEPVEIAAAAQALLAPPSPRPLLGRRVLITAGPTHEPIDPVRYIANRSSGKQGYAIAA CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCEEEEE AAAAAGAEVVLISGPVDLRAPDGVTLTRVESARDMLDAVEAALPADIAIFAAAVADWRVA HHHHCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SEGGQKIKKGEGGPPPLQLTENPDILATVAKLGDDRPPLVIGFAAETENLLANARSKLAR CCCCHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH KGCDWIVANDVSAAGGVMGGDRNTVHLLTKSADTVDVESWPLMTKDDVATALVARIAREL CCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHH EVHQS HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA