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The map label for this gene is sodA1 [H]

Identifier: 86747733

GI number: 86747733

Start: 682556

End: 683290

Strand: Direct

Name: sodA1 [H]

Synonym: RPB_0607

Alternate gene names: 86747733

Gene position: 682556-683290 (Clockwise)

Preceding gene: 86747732

Following gene: 86747734

Centisome position: 12.8

GC content: 67.21

Gene sequence:

>735_bases
ATGTCATTGCTGTCCCGACGCCGCCTGATCGTCTCCGCGACCGGATTCGCCGCTGCCGCCATGGCGGCGCCGCGCGCCGC
CTTCGCGCAAGCGGCCGCAACGCCCGCCGGTCCGTTCACGCTGCCGCCGCTGCCCTATCCGGCCGCGGCGCTGGAGCCGC
ATATCGATGCCAAGACGATGGAGATCCATCACGGCAAGCATCACCAGGCCTATGTGAGCAATATGAACGGCTTCGCCAAG
GACCATCCGAAGCTGGCGCAGATGTCGGTGCCGGACGTGCTCGGCAAGCTCGGCGACGTGCCGGAGGCGATCCGCACCGG
CGTGCGCAACAATCTCGGCGGTCACGCCAATCACACCATGTTCTGGCAGATCATGGGCCCGAACGGCGGCAAGCCGAGCG
GCGAGGTCGCGGCCGCGATCGATCGCGATCTCGGCGGCATGGACAAGTTCCAGGCCGATTTCAACGCCGCCGGCGGCAAG
CAGTTCGGCTCCGGCTGGGTGTTCGTCACGGTGGGCAAGGACGGCAAGCTCGCGATCGAGGCCCGGCCCAATCAGGACAC
GCCGCTGATGGACGGCAAGCGCGTGCTGCTCGGCAACGACGTCTGGGAACACGCCTACTATCTCAACTACCAGAACCGCC
GCGCCGACTATCTGAAGGCGTGGTGGAACACCGTGAACTGGAGCAAGGTCGGCGAGCGCTACGCCGCCGCCAAGGCCGGT
ACGCTCGGCGTCTGA

Upstream 100 bases:

>100_bases
TGCGCTACTCCGCCGCACCGGCGCCGTGGTTTCGTCGGAAACTGCGGTCGCCGACGGGCGTAGTTCGTCCACGGCCTCGC
GCCGAACCGGAGGAATTCCC

Downstream 100 bases:

>100_bases
GCCGCCATCGCGCAAGCGCCCGGCGCGGTTGGCCGACCGCGCCGGCGTGCTCCCGCCGCCCGCGTCGTGCTCCCGCGATT
CGCGCCGGCCACACCGTGCA

Product: superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSLLSRRRLIVSATGFAAAAMAAPRAAFAQAAATPAGPFTLPPLPYPAAALEPHIDAKTMEIHHGKHHQAYVSNMNGFAK
DHPKLAQMSVPDVLGKLGDVPEAIRTGVRNNLGGHANHTMFWQIMGPNGGKPSGEVAAAIDRDLGGMDKFQADFNAAGGK
QFGSGWVFVTVGKDGKLAIEARPNQDTPLMDGKRVLLGNDVWEHAYYLNYQNRRADYLKAWWNTVNWSKVGERYAAAKAG
TLGV

Sequences:

>Translated_244_residues
MSLLSRRRLIVSATGFAAAAMAAPRAAFAQAAATPAGPFTLPPLPYPAAALEPHIDAKTMEIHHGKHHQAYVSNMNGFAK
DHPKLAQMSVPDVLGKLGDVPEAIRTGVRNNLGGHANHTMFWQIMGPNGGKPSGEVAAAIDRDLGGMDKFQADFNAAGGK
QFGSGWVFVTVGKDGKLAIEARPNQDTPLMDGKRVLLGNDVWEHAYYLNYQNRRADYLKAWWNTVNWSKVGERYAAAKAG
TLGV
>Mature_243_residues
SLLSRRRLIVSATGFAAAAMAAPRAAFAQAAATPAGPFTLPPLPYPAAALEPHIDAKTMEIHHGKHHQAYVSNMNGFAKD
HPKLAQMSVPDVLGKLGDVPEAIRTGVRNNLGGHANHTMFWQIMGPNGGKPSGEVAAAIDRDLGGMDKFQADFNAAGGKQ
FGSGWVFVTVGKDGKLAIEARPNQDTPLMDGKRVLLGNDVWEHAYYLNYQNRRADYLKAWWNTVNWSKVGERYAAAKAGT
LGV

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=205, Percent_Identity=48.780487804878, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI67782305, Length=205, Percent_Identity=48.780487804878, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI67782309, Length=202, Percent_Identity=41.0891089108911, Blast_Score=134, Evalue=7e-32,
Organism=Escherichia coli, GI1790342, Length=207, Percent_Identity=47.8260869565217, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1787946, Length=199, Percent_Identity=43.7185929648241, Blast_Score=165, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17506561, Length=203, Percent_Identity=40.3940886699507, Blast_Score=147, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17569479, Length=231, Percent_Identity=35.4978354978355, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6321796, Length=208, Percent_Identity=37.0192307692308, Blast_Score=135, Evalue=6e-33,
Organism=Drosophila melanogaster, GI17136812, Length=223, Percent_Identity=39.4618834080717, Blast_Score=151, Evalue=4e-37,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 26259; Mature: 26128

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLSRRRLIVSATGFAAAAMAAPRAAFAQAAATPAGPFTLPPLPYPAAALEPHIDAKTM
CCCHHCCEEEEEECCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCEEE
EIHHGKHHQAYVSNMNGFAKDHPKLAQMSVPDVLGKLGDVPEAIRTGVRNNLGGHANHTM
EEECCCCHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEE
FWQIMGPNGGKPSGEVAAAIDRDLGGMDKFQADFNAAGGKQFGSGWVFVTVGKDGKLAIE
EEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEE
ARPNQDTPLMDGKRVLLGNDVWEHAYYLNYQNRRADYLKAWWNTVNWSKVGERYAAAKAG
ECCCCCCCCCCCCEEEECCHHHHHEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
TLGV
CCCC
>Mature Secondary Structure 
SLLSRRRLIVSATGFAAAAMAAPRAAFAQAAATPAGPFTLPPLPYPAAALEPHIDAKTM
CCHHCCEEEEEECCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCEEE
EIHHGKHHQAYVSNMNGFAKDHPKLAQMSVPDVLGKLGDVPEAIRTGVRNNLGGHANHTM
EEECCCCHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEE
FWQIMGPNGGKPSGEVAAAIDRDLGGMDKFQADFNAAGGKQFGSGWVFVTVGKDGKLAIE
EEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEE
ARPNQDTPLMDGKRVLLGNDVWEHAYYLNYQNRRADYLKAWWNTVNWSKVGERYAAAKAG
ECCCCCCCCCCCCEEEECCHHHHHEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
TLGV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7860607 [H]