| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is gabD [H]
Identifier: 86747703
GI number: 86747703
Start: 648576
End: 650069
Strand: Reverse
Name: gabD [H]
Synonym: RPB_0577
Alternate gene names: 86747703
Gene position: 650069-648576 (Counterclockwise)
Preceding gene: 86747704
Following gene: 86747695
Centisome position: 12.19
GC content: 67.2
Gene sequence:
>1494_bases ATGTCCCCAACTGCCGCCGCCCGCCCGTCCGATGCCGCCTCGTCGCTGCGCGACCGCCTGAAAGATCCGTCGCTGCTGCG CGAACAGTGCTTCATCGACGGCGCCTGGACCGGGACGGCGGAGATCGCCGTGACCAATCCGGCGAATCGCCAGGAACTCG GCAAGATCCCGGATCTGGGCGCCGCCGGGGCGACCGCCGCGGTCGAGGCCGCCGAGCGGGCGTTTCCGGCCTGGGCCAAG CTGACCGCCAAGCAGCGCTCCAACATCATGCGCAAATGGTTCGAGCTGATCGTCGCCAACCGCGAGGATCTGGCGCTGAT CCTTACCTCCGAACAGGGCAAGCCGCTGACCGAAGCGCTCGGCGAGGTCGATATCGGCGCCGCCTATGTGGAGTTCTTCG CCGAGGAAGCCCGACGGGTCTATGGCGAAACCATTCCGACGCAGCGCGCCGATGCCCGGCTGATCGCCATCAAGCAGCCG ATCGGCGTCTGCGCGGCGATCACGCCGTGGAATTTTCCGAACTCGATGATCACCCGCAAGGTGTCGCCGGCGCTGGCCGC GGGCTGCACCGTGGTGCTGAAGCCGGCCGAAGAGACGCCGTTCTCGGCGCTGGCGCTGGCGGTGCTGGCCGAGAAGGCCG GCGTGCCGAAAGGCGTGTTCAACATCGTCACCGGCGACGCGCCGCCGATCGGCCAAGTGTTCTGCGAACATCCGGCGGTG CGCTTCGTCGGCTTCACCGGCTCCACCGAAGTCGGCAAGATCCTGTACCGGCAGTCCGCCGTGGGCGTGAAGAAGCTCGG TCTGGAGCTCGGCGGTAACGCTCCGTTCATCGTGTTCGACGATGCCGACATCGACGCCGCGGTCGACGGCGCGATGGTGT CGAAATATCGCAACATGGGCCAGACCTGCGTCTGCGCCAACCGGCTCTATGTGCAGGACGGCGTCTACGATGCCTTCGTC GAGAAGCTCGCCGCCAAGGTCAAGGCGATGACGGTCGGCGACGGCACCGAGCCGGGCGTCACCCAGGGCCCGCTGATCAA CGAAGCCGCGGTCGAGAAGACCGAGAAGCACATCGCCGATGCGGTGTCGAACGGCGCGAAGGTGATCACCGGCGGCAAGC GCCACGCGCTCGGCGGCACCTTCTTCGAGCCCACCGTGCTGGCCGATGTGCGCCCCGACGCGCTGGTCGCCCATGAGGAG ACGTTCGGCCCGCTGGCCCCGGTGTTCCGCTTCAAGGACGAAGCCGAAGTGATCAAGCTCGCCAACGCCTCGCCGTTCGG CCTCGCCAGTTACTTCTACGCCCGCGATCTCGGCCGGGTCTGGCGCGTCGCCGAGGCGCTGGAGTCGGGCATGGTCGGCG TCAATTCCGGCCTGATCACCACCGAAGTCGCGCCCTTCGGCGGCGTCAAGGAATCGGGGCTGGGCCGCGAAGGCTCGCAT CACGGCATGGACGAATATGTCGAGATCAAATACGTGATGATGGCGGGGATCTGA
Upstream 100 bases:
>100_bases CCGTGCCAACCGCGCGAGATGCTTCTATACTTCCTCACAGGCCGGGTCCCGCTTCGCTCGCAGGCTCCCGCGCGCCGACG CCAAATTTCGAGGAAGACCG
Downstream 100 bases:
>100_bases GCGAACTAACACTCGCTCCGCCGTCATCCTGAGCCACTTGCTCCGCCGTCATCCTGAGGTGCGCGCCCTTGCGCGCCTCG AAGGATGCGCAGCGGGCACC
Product: succinic semialdehyde dehydrogenase
Products: NA
Alternate protein names: SSDH [H]
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MSPTAAARPSDAASSLRDRLKDPSLLREQCFIDGAWTGTAEIAVTNPANRQELGKIPDLGAAGATAAVEAAERAFPAWAK LTAKQRSNIMRKWFELIVANREDLALILTSEQGKPLTEALGEVDIGAAYVEFFAEEARRVYGETIPTQRADARLIAIKQP IGVCAAITPWNFPNSMITRKVSPALAAGCTVVLKPAEETPFSALALAVLAEKAGVPKGVFNIVTGDAPPIGQVFCEHPAV RFVGFTGSTEVGKILYRQSAVGVKKLGLELGGNAPFIVFDDADIDAAVDGAMVSKYRNMGQTCVCANRLYVQDGVYDAFV EKLAAKVKAMTVGDGTEPGVTQGPLINEAAVEKTEKHIADAVSNGAKVITGGKRHALGGTFFEPTVLADVRPDALVAHEE TFGPLAPVFRFKDEAEVIKLANASPFGLASYFYARDLGRVWRVAEALESGMVGVNSGLITTEVAPFGGVKESGLGREGSH HGMDEYVEIKYVMMAGI
Sequences:
>Translated_497_residues MSPTAAARPSDAASSLRDRLKDPSLLREQCFIDGAWTGTAEIAVTNPANRQELGKIPDLGAAGATAAVEAAERAFPAWAK LTAKQRSNIMRKWFELIVANREDLALILTSEQGKPLTEALGEVDIGAAYVEFFAEEARRVYGETIPTQRADARLIAIKQP IGVCAAITPWNFPNSMITRKVSPALAAGCTVVLKPAEETPFSALALAVLAEKAGVPKGVFNIVTGDAPPIGQVFCEHPAV RFVGFTGSTEVGKILYRQSAVGVKKLGLELGGNAPFIVFDDADIDAAVDGAMVSKYRNMGQTCVCANRLYVQDGVYDAFV EKLAAKVKAMTVGDGTEPGVTQGPLINEAAVEKTEKHIADAVSNGAKVITGGKRHALGGTFFEPTVLADVRPDALVAHEE TFGPLAPVFRFKDEAEVIKLANASPFGLASYFYARDLGRVWRVAEALESGMVGVNSGLITTEVAPFGGVKESGLGREGSH HGMDEYVEIKYVMMAGI >Mature_496_residues SPTAAARPSDAASSLRDRLKDPSLLREQCFIDGAWTGTAEIAVTNPANRQELGKIPDLGAAGATAAVEAAERAFPAWAKL TAKQRSNIMRKWFELIVANREDLALILTSEQGKPLTEALGEVDIGAAYVEFFAEEARRVYGETIPTQRADARLIAIKQPI GVCAAITPWNFPNSMITRKVSPALAAGCTVVLKPAEETPFSALALAVLAEKAGVPKGVFNIVTGDAPPIGQVFCEHPAVR FVGFTGSTEVGKILYRQSAVGVKKLGLELGGNAPFIVFDDADIDAAVDGAMVSKYRNMGQTCVCANRLYVQDGVYDAFVE KLAAKVKAMTVGDGTEPGVTQGPLINEAAVEKTEKHIADAVSNGAKVITGGKRHALGGTFFEPTVLADVRPDALVAHEET FGPLAPVFRFKDEAEVIKLANASPFGLASYFYARDLGRVWRVAEALESGMVGVNSGLITTEVAPFGGVKESGLGREGSHH GMDEYVEIKYVMMAGI
Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507229, Length=479, Percent_Identity=57.2025052192067, Blast_Score=528, Evalue=1e-150, Organism=Homo sapiens, GI25777721, Length=492, Percent_Identity=55.4878048780488, Blast_Score=517, Evalue=1e-146, Organism=Homo sapiens, GI25777730, Length=498, Percent_Identity=37.7510040160643, Blast_Score=315, Evalue=4e-86, Organism=Homo sapiens, GI153266822, Length=475, Percent_Identity=38.3157894736842, Blast_Score=315, Evalue=9e-86, Organism=Homo sapiens, GI238814322, Length=478, Percent_Identity=37.2384937238494, Blast_Score=311, Evalue=1e-84, Organism=Homo sapiens, GI21614513, Length=422, Percent_Identity=39.3364928909953, Blast_Score=309, Evalue=5e-84, Organism=Homo sapiens, GI25777724, Length=475, Percent_Identity=37.6842105263158, Blast_Score=308, Evalue=9e-84, Organism=Homo sapiens, GI12007648, Length=480, Percent_Identity=35, Blast_Score=308, Evalue=1e-83, Organism=Homo sapiens, GI25777732, Length=484, Percent_Identity=36.1570247933884, Blast_Score=299, Evalue=3e-81, Organism=Homo sapiens, GI21361176, Length=483, Percent_Identity=36.231884057971, Blast_Score=298, Evalue=7e-81, Organism=Homo sapiens, GI25777728, Length=417, Percent_Identity=39.3285371702638, Blast_Score=289, Evalue=5e-78, Organism=Homo sapiens, GI115387104, Length=452, Percent_Identity=34.5132743362832, Blast_Score=275, Evalue=9e-74, Organism=Homo sapiens, GI25777726, Length=475, Percent_Identity=34.3157894736842, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI25952152, Length=471, Percent_Identity=32.2717622080679, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI310128093, Length=495, Percent_Identity=29.8989898989899, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI11095441, Length=475, Percent_Identity=28.4210526315789, Blast_Score=215, Evalue=7e-56, Organism=Homo sapiens, GI310128103, Length=477, Percent_Identity=30.398322851153, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI188035924, Length=477, Percent_Identity=30.398322851153, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI301500698, Length=281, Percent_Identity=37.0106761565836, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI310128091, Length=495, Percent_Identity=29.0909090909091, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI310128089, Length=330, Percent_Identity=30.9090909090909, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI310128097, Length=250, Percent_Identity=35.2, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI223972651, Length=418, Percent_Identity=27.511961722488, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI310128087, Length=477, Percent_Identity=26.4150943396226, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI206597441, Length=348, Percent_Identity=30.7471264367816, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI206597439, Length=348, Percent_Identity=30.7471264367816, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI22907049, Length=348, Percent_Identity=30.7471264367816, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI73695881, Length=340, Percent_Identity=29.7058823529412, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI73695879, Length=340, Percent_Identity=29.7058823529412, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI4502043, Length=341, Percent_Identity=30.2052785923754, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI238814371, Length=341, Percent_Identity=30.2052785923754, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI73466520, Length=334, Percent_Identity=29.0419161676647, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI4557303, Length=334, Percent_Identity=29.0419161676647, Blast_Score=133, Evalue=5e-31, Organism=Homo sapiens, GI71773324, Length=341, Percent_Identity=30.2052785923754, Blast_Score=133, Evalue=5e-31, Organism=Homo sapiens, GI310128095, Length=309, Percent_Identity=30.7443365695793, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI25777736, Length=469, Percent_Identity=25.5863539445629, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI25777734, Length=469, Percent_Identity=25.5863539445629, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI238859541, Length=469, Percent_Identity=25.5863539445629, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI223972653, Length=419, Percent_Identity=23.6276849642005, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI310128099, Length=259, Percent_Identity=26.2548262548263, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI310128101, Length=259, Percent_Identity=26.2548262548263, Blast_Score=87, Evalue=3e-17, Organism=Escherichia coli, GI1789015, Length=479, Percent_Identity=61.7954070981211, Blast_Score=620, Evalue=1e-179, Organism=Escherichia coli, GI1787684, Length=473, Percent_Identity=38.6892177589852, Blast_Score=330, Evalue=1e-91, Organism=Escherichia coli, GI1787715, Length=453, Percent_Identity=38.8520971302428, Blast_Score=282, Evalue=3e-77, Organism=Escherichia coli, GI1787558, Length=478, Percent_Identity=34.7280334728033, Blast_Score=278, Evalue=5e-76, Organism=Escherichia coli, GI87081896, Length=461, Percent_Identity=35.7917570498915, Blast_Score=275, Evalue=4e-75, Organism=Escherichia coli, GI1786504, Length=482, Percent_Identity=34.2323651452282, Blast_Score=258, Evalue=6e-70, Organism=Escherichia coli, GI87081926, Length=447, Percent_Identity=32.4384787472036, Blast_Score=242, Evalue=4e-65, Organism=Escherichia coli, GI87082295, Length=512, Percent_Identity=30.6640625, Blast_Score=224, Evalue=1e-59, Organism=Escherichia coli, GI1788042, Length=463, Percent_Identity=32.829373650108, Blast_Score=199, Evalue=5e-52, Organism=Escherichia coli, GI1787250, Length=450, Percent_Identity=29.5555555555556, Blast_Score=156, Evalue=3e-39, Organism=Escherichia coli, GI1787653, Length=431, Percent_Identity=22.969837587007, Blast_Score=87, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17534119, Length=466, Percent_Identity=49.1416309012876, Blast_Score=440, Evalue=1e-124, Organism=Caenorhabditis elegans, GI133930964, Length=476, Percent_Identity=37.3949579831933, Blast_Score=312, Evalue=3e-85, Organism=Caenorhabditis elegans, GI17562198, Length=476, Percent_Identity=38.0252100840336, Blast_Score=303, Evalue=1e-82, Organism=Caenorhabditis elegans, GI25144435, Length=454, Percent_Identity=37.0044052863436, Blast_Score=300, Evalue=1e-81, Organism=Caenorhabditis elegans, GI32564736, Length=416, Percent_Identity=37.5, Blast_Score=283, Evalue=1e-76, Organism=Caenorhabditis elegans, GI25143876, Length=432, Percent_Identity=36.1111111111111, Blast_Score=261, Evalue=8e-70, Organism=Caenorhabditis elegans, GI25143874, Length=432, Percent_Identity=36.1111111111111, Blast_Score=260, Evalue=1e-69, Organism=Caenorhabditis elegans, GI17551164, Length=458, Percent_Identity=34.061135371179, Blast_Score=245, Evalue=4e-65, Organism=Caenorhabditis elegans, GI71995606, Length=476, Percent_Identity=34.453781512605, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI71995613, Length=416, Percent_Identity=34.375, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI115534176, Length=464, Percent_Identity=30.3879310344828, Blast_Score=211, Evalue=7e-55, Organism=Caenorhabditis elegans, GI71986308, Length=459, Percent_Identity=29.8474945533769, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI32566756, Length=441, Percent_Identity=29.7052154195011, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI25146391, Length=441, Percent_Identity=29.7052154195011, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI25146394, Length=442, Percent_Identity=29.6380090497738, Blast_Score=152, Evalue=6e-37, Organism=Caenorhabditis elegans, GI17564084, Length=438, Percent_Identity=30.365296803653, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI17534447, Length=458, Percent_Identity=27.9475982532751, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI115532534, Length=394, Percent_Identity=28.9340101522843, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI32564151, Length=426, Percent_Identity=27.4647887323944, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI71990744, Length=299, Percent_Identity=27.7591973244147, Blast_Score=92, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6319478, Length=486, Percent_Identity=47.5308641975309, Blast_Score=478, Evalue=1e-136, Organism=Saccharomyces cerevisiae, GI6324950, Length=451, Percent_Identity=37.2505543237251, Blast_Score=309, Evalue=5e-85, Organism=Saccharomyces cerevisiae, GI6320917, Length=469, Percent_Identity=36.6737739872068, Blast_Score=307, Evalue=3e-84, Organism=Saccharomyces cerevisiae, GI6325196, Length=455, Percent_Identity=35.1648351648352, Blast_Score=266, Evalue=4e-72, Organism=Saccharomyces cerevisiae, GI6323822, Length=498, Percent_Identity=33.7349397590361, Blast_Score=245, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6323821, Length=496, Percent_Identity=32.8629032258064, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6321828, Length=471, Percent_Identity=26.1146496815287, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6321826, Length=480, Percent_Identity=28.5416666666667, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6323757, Length=317, Percent_Identity=26.4984227129338, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI281362580, Length=482, Percent_Identity=53.9419087136929, Blast_Score=528, Evalue=1e-150, Organism=Drosophila melanogaster, GI62472918, Length=482, Percent_Identity=53.9419087136929, Blast_Score=528, Evalue=1e-150, Organism=Drosophila melanogaster, GI62472926, Length=482, Percent_Identity=53.9419087136929, Blast_Score=528, Evalue=1e-150, Organism=Drosophila melanogaster, GI62472936, Length=482, Percent_Identity=53.9419087136929, Blast_Score=528, Evalue=1e-150, Organism=Drosophila melanogaster, GI21356737, Length=482, Percent_Identity=53.9419087136929, Blast_Score=528, Evalue=1e-150, Organism=Drosophila melanogaster, GI24650465, Length=478, Percent_Identity=39.1213389121339, Blast_Score=326, Evalue=2e-89, Organism=Drosophila melanogaster, GI20129399, Length=491, Percent_Identity=37.4745417515275, Blast_Score=307, Evalue=1e-83, Organism=Drosophila melanogaster, GI24585660, Length=476, Percent_Identity=36.344537815126, Blast_Score=306, Evalue=3e-83, Organism=Drosophila melanogaster, GI24638876, Length=479, Percent_Identity=29.2275574112735, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24638878, Length=479, Percent_Identity=29.2275574112735, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24666674, Length=480, Percent_Identity=27.9166666666667, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI45552499, Length=422, Percent_Identity=24.8815165876777, Blast_Score=125, Evalue=9e-29, Organism=Drosophila melanogaster, GI281360303, Length=422, Percent_Identity=24.8815165876777, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI281360301, Length=422, Percent_Identity=24.8815165876777, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI281360299, Length=419, Percent_Identity=25.0596658711217, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI281360297, Length=419, Percent_Identity=25.0596658711217, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI281360295, Length=419, Percent_Identity=25.0596658711217, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24586250, Length=419, Percent_Identity=25.0596658711217, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24668425, Length=440, Percent_Identity=25.6818181818182, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24668417, Length=440, Percent_Identity=25.6818181818182, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24668413, Length=440, Percent_Identity=25.6818181818182, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI28571806, Length=444, Percent_Identity=24.3243243243243, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI28571798, Length=444, Percent_Identity=24.3243243243243, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI28571796, Length=444, Percent_Identity=24.3243243243243, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI28571794, Length=444, Percent_Identity=24.3243243243243, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI28571802, Length=444, Percent_Identity=24.3243243243243, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI28571800, Length=444, Percent_Identity=24.3243243243243, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI28574525, Length=435, Percent_Identity=23.448275862069, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI281360293, Length=231, Percent_Identity=25.1082251082251, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016160 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR010102 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.79 [H]
Molecular weight: Translated: 52769; Mature: 52638
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTAAARPSDAASSLRDRLKDPSLLREQCFIDGAWTGTAEIAVTNPANRQELGKIPDLG CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHCCCCCCC AAGATAAVEAAERAFPAWAKLTAKQRSNIMRKWFELIVANREDLALILTSEQGKPLTEAL CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH GEVDIGAAYVEFFAEEARRVYGETIPTQRADARLIAIKQPIGVCAAITPWNFPNSMITRK CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHH VSPALAAGCTVVLKPAEETPFSALALAVLAEKAGVPKGVFNIVTGDAPPIGQVFCEHPAV CCHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHEEECCCCCCHHHHHHCCCCE RFVGFTGSTEVGKILYRQSAVGVKKLGLELGGNAPFIVFDDADIDAAVDGAMVSKYRNMG EEEECCCCCHHHHHHHHHHHCCHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCC QTCVCANRLYVQDGVYDAFVEKLAAKVKAMTVGDGTEPGVTQGPLINEAAVEKTEKHIAD CEEEEECEEEEECCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH AVSNGAKVITGGKRHALGGTFFEPTVLADVRPDALVAHEETFGPLAPVFRFKDEAEVIKL HHCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCHHHHHHCCCCHHHEEE ANASPFGLASYFYARDLGRVWRVAEALESGMVGVNSGLITTEVAPFGGVKESGLGREGSH CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCCCCCCCC HGMDEYVEIKYVMMAGI CCCCHHHEEEEEEEECC >Mature Secondary Structure SPTAAARPSDAASSLRDRLKDPSLLREQCFIDGAWTGTAEIAVTNPANRQELGKIPDLG CCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHCCCCCCC AAGATAAVEAAERAFPAWAKLTAKQRSNIMRKWFELIVANREDLALILTSEQGKPLTEAL CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH GEVDIGAAYVEFFAEEARRVYGETIPTQRADARLIAIKQPIGVCAAITPWNFPNSMITRK CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHH VSPALAAGCTVVLKPAEETPFSALALAVLAEKAGVPKGVFNIVTGDAPPIGQVFCEHPAV CCHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHEEECCCCCCHHHHHHCCCCE RFVGFTGSTEVGKILYRQSAVGVKKLGLELGGNAPFIVFDDADIDAAVDGAMVSKYRNMG EEEECCCCCHHHHHHHHHHHCCHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCC QTCVCANRLYVQDGVYDAFVEKLAAKVKAMTVGDGTEPGVTQGPLINEAAVEKTEKHIAD CEEEEECEEEEECCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH AVSNGAKVITGGKRHALGGTFFEPTVLADVRPDALVAHEETFGPLAPVFRFKDEAEVIKL HHCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCHHHHHHCCCCHHHEEE ANASPFGLASYFYARDLGRVWRVAEALESGMVGVNSGLITTEVAPFGGVKESGLGREGSH CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCCCCCCCC HGMDEYVEIKYVMMAGI CCCCHHHEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8297211; 9205837; 9278503 [H]