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The map label for this gene is 86747632

Identifier: 86747632

GI number: 86747632

Start: 568084

End: 568593

Strand: Direct

Name: 86747632

Synonym: RPB_0506

Alternate gene names: NA

Gene position: 568084-568593 (Clockwise)

Preceding gene: 86747631

Following gene: 86747636

Centisome position: 10.65

GC content: 68.63

Gene sequence:

>510_bases
ATGCGTAGCATCATGATTTTCGCGGCGGCATTGGTGGTTCTCGGCACGGCGATGGCGCAACTCGCCGATCGCATCATGCC
GGCGCCGGCGCAGGCCAGCGTCGCCAAAGCGACGGTCGGCGCCGCGCCCTATGCGGGCAGCCGCAGCGTCGCCATTCCGC
GCGACGCCCGCGGCCATTTCCAGACCGACGGCCGGATCGACGGCCAGCGTCTCGCCTTCATGGTCGACACCGGAGCTTCG
GTGGTGGCGCTCAACGAAAGCTCGGCGGCGCGCTTCGGGCTGCGGCCGCGGCCGGCGGAGTACACCGCCCGGGTCACGAC
CGCCAACGGCACCGTGAAGGCGGCGCGGACGCGGATCGCGATGCTCGATATCGGCGGGCTGATCGTGCGCGACGTCGACG
CCATGGTGCTGCCGGACGAGGCGCTGTCGGAAAATCTGCTCGGCCTGTCGTTCCTGTCGAAGCTGAAGCGTTTCGAATAC
GCCAACGGCCAGATGGTGCTCGAGCAGTAA

Upstream 100 bases:

>100_bases
CCCTTTTCGGCAAAATAGCCGGGCGCGCGGGCCGCATCGGTCGCAGCAGTCGCGCCCGCGTGATCCAATCGCGCGGCATT
CGTCTGTGTGAGTATGCGTC

Downstream 100 bases:

>100_bases
TTACTTGCGCCCGCGCAGCATGTCCTTCGCCGCCAGCAATCCGCCGCCGGCGATCAGCAGCGCCGCCAGGGCCAGCGTGG
CGGTCGGTCGCGCATAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MRSIMIFAAALVVLGTAMAQLADRIMPAPAQASVAKATVGAAPYAGSRSVAIPRDARGHFQTDGRIDGQRLAFMVDTGAS
VVALNESSAARFGLRPRPAEYTARVTTANGTVKAARTRIAMLDIGGLIVRDVDAMVLPDEALSENLLGLSFLSKLKRFEY
ANGQMVLEQ

Sequences:

>Translated_169_residues
MRSIMIFAAALVVLGTAMAQLADRIMPAPAQASVAKATVGAAPYAGSRSVAIPRDARGHFQTDGRIDGQRLAFMVDTGAS
VVALNESSAARFGLRPRPAEYTARVTTANGTVKAARTRIAMLDIGGLIVRDVDAMVLPDEALSENLLGLSFLSKLKRFEY
ANGQMVLEQ
>Mature_169_residues
MRSIMIFAAALVVLGTAMAQLADRIMPAPAQASVAKATVGAAPYAGSRSVAIPRDARGHFQTDGRIDGQRLAFMVDTGAS
VVALNESSAARFGLRPRPAEYTARVTTANGTVKAARTRIAMLDIGGLIVRDVDAMVLPDEALSENLLGLSFLSKLKRFEY
ANGQMVLEQ

Specific function: Unknown

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011969
- InterPro:   IPR021109
- InterPro:   IPR001969 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17907; Mature: 17907

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSIMIFAAALVVLGTAMAQLADRIMPAPAQASVAKATVGAAPYAGSRSVAIPRDARGHF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCC
QTDGRIDGQRLAFMVDTGASVVALNESSAARFGLRPRPAEYTARVTTANGTVKAARTRIA
CCCCCCCCCEEEEEEECCCEEEEECCCCCHHCCCCCCCCCEEEEEEECCCCEEHHHHEEE
MLDIGGLIVRDVDAMVLPDEALSENLLGLSFLSKLKRFEYANGQMVLEQ
EEECCCEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
>Mature Secondary Structure
MRSIMIFAAALVVLGTAMAQLADRIMPAPAQASVAKATVGAAPYAGSRSVAIPRDARGHF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCC
QTDGRIDGQRLAFMVDTGASVVALNESSAARFGLRPRPAEYTARVTTANGTVKAARTRIA
CCCCCCCCCEEEEEEECCCEEEEECCCCCHHCCCCCCCCCEEEEEEECCCCEEHHHHEEE
MLDIGGLIVRDVDAMVLPDEALSENLLGLSFLSKLKRFEYANGQMVLEQ
EEECCCEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1917841 [H]