| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747616
Identifier: 86747616
GI number: 86747616
Start: 549524
End: 550597
Strand: Direct
Name: 86747616
Synonym: RPB_0490
Alternate gene names: NA
Gene position: 549524-550597 (Clockwise)
Preceding gene: 86747615
Following gene: 86747621
Centisome position: 10.31
GC content: 72.07
Gene sequence:
>1074_bases ATGAGCGATGCCGTGGTCGACGACATCGTGGCGCTGCTGCCGCCGCTGCTGCGATCGATCGAGGCGCTGGACTTCGTCGC GCGCTATCTGCACCCGCCGGATTTCGGCGAGGTGATGCGGCTCGCCGGCGAGCCCGAGACGGAGCTGCGCGCCGCGCTGC CGCGGCTGGCGGCCTGGCCGGACACGTTCGCGCATCTGCGCGAGCCGCTGAAGCTCGCGGGCGATCATGTGGTCGCGGCG TTCGACGGGCTGCGCGCGGTCGACGGCGGCGACGGCGACCTCGTCGCGGTGTTCCGGGCGCTGCGCCATCTACCGCAGGC GCTTGAGGCGCTGTATCCGCTGGCGGCGACGCTGCCGCCGCTGTCGGGGCTGTATCTCGACCCCGAGCTGCGCGCGGACG ATGCCGTGCTCGCCCGGCTGGCGCAGCCGAAGCATCCCGACAGCGGCGTGTTCCACTTCGACAATGAGCCGGGCAGCCGC GGCGGGTTCTCGTTCTACGTGCCGGAGGACTACACGCCGGACCGCGCCTGGCCGCTGGTGGTGGCGCTGCATGGCGGCAG CGGCCACGGCCGGCTGTTCCTGTGGAGCTGGCTGCGCGACGCCCGCAGCCGCGGCGCCATCGTGGTGGCGCCGACCGCGA TCGGGCGGACCTGGGCGCTGATGGGCGAGGACGCCGACACGCCGAACCTCGCCCGCATCGTCGACTTCATCGGCTCGCGC TGGTCGGTCGATCCGCGGCGGCGGCTGGTCACCGGGCTGAGCGACGGCGGCACCTTCTGCTACGTCACCGGGCTGGAGCG CGAATCCCCCTTCACGCATCTGGCGCCGATCGCCGCGAGCTTCCATCCGCTGCTGGCCGGCATGGCCGATCCGGAGCGGC TGCGCGGGCTGCCGATCCAGATCGTGCATGGCCGGCACGACTGGATGTTCCCGGTCGAACTGGCGCGGCAGGCGCAACAG GCGCTATCCGCCGCCGGCGCCGATGTCGGCTATCGCGAGATCGACGATCTCAGCCACACTTATCCGCGCGAGATCAACGC GGCGTTGCTGGACTGGCTGGGTAAGGCGGACTGA
Upstream 100 bases:
>100_bases CGTTTTGCCGTGAGCGGCCGACTCGGCTTGCTTTGATCCGGAGGATCGCCACTCTCTGTTCATGACGGCCGAGCTGCCGG TGCATTCGGAGAGACTTGCG
Downstream 100 bases:
>100_bases GACTACGCCCGGCGCAGCCGCAGCACGGTGGACTTCGCCAATTCGGTGGCCTCGCCGCGATCGGCATAGAGCGCCAGCAG CAGCAGCACGAAGCCGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSDAVVDDIVALLPPLLRSIEALDFVARYLHPPDFGEVMRLAGEPETELRAALPRLAAWPDTFAHLREPLKLAGDHVVAA FDGLRAVDGGDGDLVAVFRALRHLPQALEALYPLAATLPPLSGLYLDPELRADDAVLARLAQPKHPDSGVFHFDNEPGSR GGFSFYVPEDYTPDRAWPLVVALHGGSGHGRLFLWSWLRDARSRGAIVVAPTAIGRTWALMGEDADTPNLARIVDFIGSR WSVDPRRRLVTGLSDGGTFCYVTGLERESPFTHLAPIAASFHPLLAGMADPERLRGLPIQIVHGRHDWMFPVELARQAQQ ALSAAGADVGYREIDDLSHTYPREINAALLDWLGKAD
Sequences:
>Translated_357_residues MSDAVVDDIVALLPPLLRSIEALDFVARYLHPPDFGEVMRLAGEPETELRAALPRLAAWPDTFAHLREPLKLAGDHVVAA FDGLRAVDGGDGDLVAVFRALRHLPQALEALYPLAATLPPLSGLYLDPELRADDAVLARLAQPKHPDSGVFHFDNEPGSR GGFSFYVPEDYTPDRAWPLVVALHGGSGHGRLFLWSWLRDARSRGAIVVAPTAIGRTWALMGEDADTPNLARIVDFIGSR WSVDPRRRLVTGLSDGGTFCYVTGLERESPFTHLAPIAASFHPLLAGMADPERLRGLPIQIVHGRHDWMFPVELARQAQQ ALSAAGADVGYREIDDLSHTYPREINAALLDWLGKAD >Mature_356_residues SDAVVDDIVALLPPLLRSIEALDFVARYLHPPDFGEVMRLAGEPETELRAALPRLAAWPDTFAHLREPLKLAGDHVVAAF DGLRAVDGGDGDLVAVFRALRHLPQALEALYPLAATLPPLSGLYLDPELRADDAVLARLAQPKHPDSGVFHFDNEPGSRG GFSFYVPEDYTPDRAWPLVVALHGGSGHGRLFLWSWLRDARSRGAIVVAPTAIGRTWALMGEDADTPNLARIVDFIGSRW SVDPRRRLVTGLSDGGTFCYVTGLERESPFTHLAPIAASFHPLLAGMADPERLRGLPIQIVHGRHDWMFPVELARQAQQA LSAAGADVGYREIDDLSHTYPREINAALLDWLGKAD
Specific function: Unknown
COG id: COG0400
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39038; Mature: 38907
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVVDDIVALLPPLLRSIEALDFVARYLHPPDFGEVMRLAGEPETELRAALPRLAAWP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCC DTFAHLREPLKLAGDHVVAAFDGLRAVDGGDGDLVAVFRALRHLPQALEALYPLAATLPP HHHHHHHHHHHHCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC LSGLYLDPELRADDAVLARLAQPKHPDSGVFHFDNEPGSRGGFSFYVPEDYTPDRAWPLV CCCEEECCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCEEE VALHGGSGHGRLFLWSWLRDARSRGAIVVAPTAIGRTWALMGEDADTPNLARIVDFIGSR EEEECCCCCCCEEHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCCC WSVDPRRRLVTGLSDGGTFCYVTGLERESPFTHLAPIAASFHPLLAGMADPERLRGLPIQ CCCCHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCEE IVHGRHDWMFPVELARQAQQALSAAGADVGYREIDDLSHTYPREINAALLDWLGKAD EEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SDAVVDDIVALLPPLLRSIEALDFVARYLHPPDFGEVMRLAGEPETELRAALPRLAAWP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCC DTFAHLREPLKLAGDHVVAAFDGLRAVDGGDGDLVAVFRALRHLPQALEALYPLAATLPP HHHHHHHHHHHHCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC LSGLYLDPELRADDAVLARLAQPKHPDSGVFHFDNEPGSRGGFSFYVPEDYTPDRAWPLV CCCEEECCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCEEE VALHGGSGHGRLFLWSWLRDARSRGAIVVAPTAIGRTWALMGEDADTPNLARIVDFIGSR EEEECCCCCCCEEHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCCC WSVDPRRRLVTGLSDGGTFCYVTGLERESPFTHLAPIAASFHPLLAGMADPERLRGLPIQ CCCCHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCEE IVHGRHDWMFPVELARQAQQALSAAGADVGYREIDDLSHTYPREINAALLDWLGKAD EEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA