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The map label for this gene is yvaQ [H]

Identifier: 86747615

GI number: 86747615

Start: 547666

End: 549360

Strand: Direct

Name: yvaQ [H]

Synonym: RPB_0489

Alternate gene names: 86747615

Gene position: 547666-549360 (Clockwise)

Preceding gene: 86747613

Following gene: 86747616

Centisome position: 10.27

GC content: 64.9

Gene sequence:

>1695_bases
ATGCTCGCAAAATTCTCAATTCGTACCAAGATCACGACGCTCGTCGCGGCTCTGTTGATCGCCATGTCGGGCCTGGGCGC
GATCGGGCTGCTGAAAATGCAGGGGATCAACGCCGCCACGGTCGAGATCACCAGCAACTGGCTGCCGACCGTCATGACCC
TCGGCGATATGCGGGCCGAAGTCATCAGCTATCGGATGAAGCTGCGAAATCACCTGCTGGAGACGAACGCCGGCCGCATG
GCCGACATCGAAAAGCAGTTGGCCGACAACGAAGACAGGATCAAGAAGGCCCAGAATGGCTATGAGCCGCTGATCTCGTC
TCCGGAGGAGCGGCAGATCTACGAAACATGGGTCAGCGAATGGGCGAAATACCGGGCCGTGGTCCCGAAGCTGCTGGAGC
TGTCGCGCAACAGCCCTGAAGGACGGATCTCGGTCGAGGGTGTGGAGATGCTGTCGCGCACCTTCAATCCGATCGGTGAG
CGTATGGACGAGGCGATGAACAAGGACCTCGCGTTCAACAACAAGGGCGCCCACCATGCGAGCGAAACCGCCGCATCGAC
CTACAGCTCGGCCTTCTTCATCGTGGTGTCGATCCTCGGCGTGGCGATCGTGGTCGGCGTCATCGCCAGCGTGATGGTGG
TCCGCGACATCACATCGGGCATCGCCGCGATCATCAAGCCGATGCAGACGTTCGGCCAGGGCGATCTCTCCGCCGACGTG
CCCTATCGCGGCGCGAGTACCGAAATCGGCGCGATGGCCGATGCGCTGCAGGTCTTCAAGGAAGCGCTGATCGCCAAGAA
GGCGGCCGACGAAGCCGCGGCACATGAAGCCGAGGCGAAGATCGCCCGCGCCCAGCGCGTCGATACGGCGACCCGCAAAT
TCGAATCCGCGATCGGCCAGATCGTCGAGACGGTGTCGTCGGCGTCGACCGAGCTCGAAGCCTCGGCCAGCACGCTCACG
GCCACTGCCGGCCACGCCCAGGAACTGACCACCGCGGTTGCGGCGGCGTCGGAGGAAGCCTCGACCAATGTGCAGTCGGT
GGCCTCGGCGACCGAAGAGATGGCGTCGTCGGTCAACGAGATCAGCCGTCAGGTTCAGGAATCGGCGCGGATCGCCAATG
ATGCGGTCGATCAGGCGCGCAAGACCAACGACAGCGTCGGCATGCTGTCGGCGGCCGCGTCGCGGATCGGCGACGTCGTC
GAACTGATCAACACCATCGCCGGCCAGACCAATCTGCTGGCGCTCAACGCCACGATCGAGGCGGCGCGTGCCGGCGAGGC
GGGCCGCGGCTTCGCGGTGGTCGCGAGCGAAGTCAAGGCGCTCGCCGAGCAGACCGCCAAGGCGACCGGCGAGATCGGTC
AGCAGATCTCCGGGATCCAGGCCGCGACCGATCAATCGGTGTCGGCCATCAAGGAGATCGGCATGACCATCGGCCGGATG
TCGGAAATCGCCTCGACCATCGCCTCGGCGGTGGAAGAGCAGGGCGCCGCGACCCAGGAAATCTCGCGCAACGTGCAGCA
GGCCGCGCAGGGCACGCAGCAGGTCTCCGCCAACATCACCGACGTGCAGCGCGGCGCCAGCGAGACCGGTTCTGCGTCGT
CGCAGGTCCTGTCCGCGGCGAAATCGCTGTCGCAGGACAGCAACCGGCTCAAGGAAGAAGTCGCCACCTTCCTGGAGACG
GTGCGCGCGGCCTGA

Upstream 100 bases:

>100_bases
TGCTTCGGACCCGCTCCGAGGTGCCAGGCGGAGCGGCGGCCCTCTGCTTGCACATCACCACAGCACATCGCAGGCGCCCG
AAACGGCAGGACGGTTTCCC

Downstream 100 bases:

>100_bases
GCCGCCGTCCCGCCGGCATGTGAATCGTCCAGACAGGACGCGTCGCGCGAAAACCTCGCGCGGCGTTTTGCCGTGAGCGG
CCGACTCGGCTTGCTTTGAT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MLAKFSIRTKITTLVAALLIAMSGLGAIGLLKMQGINAATVEITSNWLPTVMTLGDMRAEVISYRMKLRNHLLETNAGRM
ADIEKQLADNEDRIKKAQNGYEPLISSPEERQIYETWVSEWAKYRAVVPKLLELSRNSPEGRISVEGVEMLSRTFNPIGE
RMDEAMNKDLAFNNKGAHHASETAASTYSSAFFIVVSILGVAIVVGVIASVMVVRDITSGIAAIIKPMQTFGQGDLSADV
PYRGASTEIGAMADALQVFKEALIAKKAADEAAAHEAEAKIARAQRVDTATRKFESAIGQIVETVSSASTELEASASTLT
ATAGHAQELTTAVAAASEEASTNVQSVASATEEMASSVNEISRQVQESARIANDAVDQARKTNDSVGMLSAAASRIGDVV
ELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKALAEQTAKATGEIGQQISGIQAATDQSVSAIKEIGMTIGRM
SEIASTIASAVEEQGAATQEISRNVQQAAQGTQQVSANITDVQRGASETGSASSQVLSAAKSLSQDSNRLKEEVATFLET
VRAA

Sequences:

>Translated_564_residues
MLAKFSIRTKITTLVAALLIAMSGLGAIGLLKMQGINAATVEITSNWLPTVMTLGDMRAEVISYRMKLRNHLLETNAGRM
ADIEKQLADNEDRIKKAQNGYEPLISSPEERQIYETWVSEWAKYRAVVPKLLELSRNSPEGRISVEGVEMLSRTFNPIGE
RMDEAMNKDLAFNNKGAHHASETAASTYSSAFFIVVSILGVAIVVGVIASVMVVRDITSGIAAIIKPMQTFGQGDLSADV
PYRGASTEIGAMADALQVFKEALIAKKAADEAAAHEAEAKIARAQRVDTATRKFESAIGQIVETVSSASTELEASASTLT
ATAGHAQELTTAVAAASEEASTNVQSVASATEEMASSVNEISRQVQESARIANDAVDQARKTNDSVGMLSAAASRIGDVV
ELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKALAEQTAKATGEIGQQISGIQAATDQSVSAIKEIGMTIGRM
SEIASTIASAVEEQGAATQEISRNVQQAAQGTQQVSANITDVQRGASETGSASSQVLSAAKSLSQDSNRLKEEVATFLET
VRAA
>Mature_564_residues
MLAKFSIRTKITTLVAALLIAMSGLGAIGLLKMQGINAATVEITSNWLPTVMTLGDMRAEVISYRMKLRNHLLETNAGRM
ADIEKQLADNEDRIKKAQNGYEPLISSPEERQIYETWVSEWAKYRAVVPKLLELSRNSPEGRISVEGVEMLSRTFNPIGE
RMDEAMNKDLAFNNKGAHHASETAASTYSSAFFIVVSILGVAIVVGVIASVMVVRDITSGIAAIIKPMQTFGQGDLSADV
PYRGASTEIGAMADALQVFKEALIAKKAADEAAAHEAEAKIARAQRVDTATRKFESAIGQIVETVSSASTELEASASTLT
ATAGHAQELTTAVAAASEEASTNVQSVASATEEMASSVNEISRQVQESARIANDAVDQARKTNDSVGMLSAAASRIGDVV
ELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKALAEQTAKATGEIGQQISGIQAATDQSVSAIKEIGMTIGRM
SEIASTIASAVEEQGAATQEISRNVQQAAQGTQQVSANITDVQRGASETGSASSQVLSAAKSLSQDSNRLKEEVATFLET
VRAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=493, Percent_Identity=25.7606490872211, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI2367378, Length=336, Percent_Identity=27.9761904761905, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1788195, Length=263, Percent_Identity=31.9391634980989, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788194, Length=192, Percent_Identity=32.2916666666667, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1789453, Length=275, Percent_Identity=29.8181818181818, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59353; Mature: 59353

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKFSIRTKITTLVAALLIAMSGLGAIGLLKMQGINAATVEITSNWLPTVMTLGDMRAE
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHH
VISYRMKLRNHLLETNAGRMADIEKQLADNEDRIKKAQNGYEPLISSPEERQIYETWVSE
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHCCCCHHHHHHHHHHHH
WAKYRAVVPKLLELSRNSPEGRISVEGVEMLSRTFNPIGERMDEAMNKDLAFNNKGAHHA
HHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
SETAASTYSSAFFIVVSILGVAIVVGVIASVMVVRDITSGIAAIIKPMQTFGQGDLSADV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PYRGASTEIGAMADALQVFKEALIAKKAADEAAAHEAEAKIARAQRVDTATRKFESAIGQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVETVSSASTELEASASTLTATAGHAQELTTAVAAASEEASTNVQSVASATEEMASSVNE
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRQVQESARIANDAVDQARKTNDSVGMLSAAASRIGDVVELINTIAGQTNLLALNATIE
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHH
AARAGEAGRGFAVVASEVKALAEQTAKATGEIGQQISGIQAATDQSVSAIKEIGMTIGRM
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEIASTIASAVEEQGAATQEISRNVQQAAQGTQQVSANITDVQRGASETGSASSQVLSAA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH
KSLSQDSNRLKEEVATFLETVRAA
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAKFSIRTKITTLVAALLIAMSGLGAIGLLKMQGINAATVEITSNWLPTVMTLGDMRAE
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHH
VISYRMKLRNHLLETNAGRMADIEKQLADNEDRIKKAQNGYEPLISSPEERQIYETWVSE
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHCCCCHHHHHHHHHHHH
WAKYRAVVPKLLELSRNSPEGRISVEGVEMLSRTFNPIGERMDEAMNKDLAFNNKGAHHA
HHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
SETAASTYSSAFFIVVSILGVAIVVGVIASVMVVRDITSGIAAIIKPMQTFGQGDLSADV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PYRGASTEIGAMADALQVFKEALIAKKAADEAAAHEAEAKIARAQRVDTATRKFESAIGQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVETVSSASTELEASASTLTATAGHAQELTTAVAAASEEASTNVQSVASATEEMASSVNE
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRQVQESARIANDAVDQARKTNDSVGMLSAAASRIGDVVELINTIAGQTNLLALNATIE
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHH
AARAGEAGRGFAVVASEVKALAEQTAKATGEIGQQISGIQAATDQSVSAIKEIGMTIGRM
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEIASTIASAVEEQGAATQEISRNVQQAAQGTQQVSANITDVQRGASETGSASSQVLSAA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH
KSLSQDSNRLKEEVATFLETVRAA
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]