| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is aceK
Identifier: 86747599
GI number: 86747599
Start: 521031
End: 522848
Strand: Direct
Name: aceK
Synonym: RPB_0473
Alternate gene names: 86747599
Gene position: 521031-522848 (Clockwise)
Preceding gene: 86747595
Following gene: 86747600
Centisome position: 9.77
GC content: 68.26
Gene sequence:
>1818_bases ATGACTGCCACCCGTCATCCCTTTGCCTCCGACATCGACGCCGCCACCCGGATCGCCGAGCCGGATTTCGATCTGCTCGA CGCGCTGGTGCGGACCGACGATCCGGACGACCAGGCCCACACGCTGGCGCGCGTGGTGTTGGCGGCGTTCGACAATTATT ACGCGGTGTCGCGGCGGATTCCGGCGCTGGCGCAGGCGGCGTTCGAGGCGCGCGACTGGGCCGCCACGGTGCGGCTGTCG AAAATCCGGCTCGGGCTGTACACCGCCTGCATCGATCAGCTGGTGCCGCTGCTGAAGGCCGGGCTGCCCGAGCTCGCCAA TGACGAACAGCTCTGGGCGCGCGCCGAGGCCGAGCTGCTGGCGGCGATCGCCGAGCGCTACGAGGCCGATTTCGCCTTCG CGTTCTGGCAGTCGCTGCGCCGCAAGCTGGTCAGCGACGAATGGCGGCCGGTGTCCTACGATACCGGGCCGGCGGCGCGG CCGAAGGCGACCAGCGCTGCGATCCTCAAGACCATCGCCACGACGCTGCCGATCAGGCCGGCGGTGATCCGCGACATCCT CGACGGCGCCGGCCTCCGCGGGCCGTGGCGCGATCGCGACGGCGACGCCGCGCTCGCCGCGGCCGCGATCGAGGCTGCGC TGGAGCCGCTCGGCCCGCGCGCCGGCGAGACCGCGAAGATCGAGATCGCCGAGTCCGGCTTCTTCCGCAATCGCGGCGCC TGCCTGGTCGGGCGCGTCCGGCTGCGCGACCGCGGCGACATGCCGATGCGCAACCTGCCGCTGTTGATCGCGCTGCTCAA CGAGGACGACGGCCTCGTCGTCGATGCGGTGCTGTGCGACGCCGACGAGCTGCAATACGCGTTCTCCTCGACGCTGGCCA ATTACCACGCCACCAATCCGCATTATCACGAGCTGGCGCGGCTGTTGCACGAACTGATGCCGAAGCGGCCGCTCGGCACG CAATATTCCTGCATCGGCTTCCACCACCTCGGCAAGGTCGCGGTGATGACCGAGATTCTCGCCGAGCACCGCAGGAGCAA GGAGAAGCTCGACACCGCGCCGGGTTTCAAGGGCACGGTGGCGATCGCGTTCACGATGCCGTCCTCGGCCTATGTGCTGA AGATCATCCGCGACCATCCCACCGACGACTACAAGTTCGACTATTTCGACGGCCTCGACGCGGTGCTGCGCAAATACAAT CTGGTGCACGAGATCGATCGCGCCGGCTCGATGCTCGACAACATCATCTACTCCAACGTCAAGCTCGAGCGCACGATGTT CGCGCCCGATCTGCTCGACGAGCTGCTGGAATCCGGCATCGACACCGTGACGCTGGAACGCGGCGCGCTGGTGTTCCGGC ATCTGATCGTGCAGATCAAGCTGACGCCGCTGCCGCTCTATCTCACCACCGCGTCCGCCGCCGATGCCCGCGCCGCGGTG ATCAATCTCGGCGACTGCATCAAGAACAACGCCGCCGCCGATATCTTCAACAAGGACCTCGACGGCCGCAACTACGGCGT CAGCCGCATCCGCAAAGTGTATCTGTTCGACTACGACGCGGTCGAGCCCCTGACCGACGTCCGGGTCCGCGGCGACGACG CGCCGCCGGGGCCGGAGTTCGAGGACGGCGTGGTGTTCCGCCCGGCCGACATGCTCGGCGGGTTGCGGATCGACGACCCG GCGCTGCGCCGCGCCTTCCGCGACGCCCATCCCGAGCTGATGCAGCCGGAGTATTGGCAGGGCATGCAGCGCGCGCTGCG CGCCGGCAAGGTTCCCCGCGTGATGAACTATCCGGCGGCCCGGCGGCTGCGGCGTTAG
Upstream 100 bases:
>100_bases CCCGATGCGAGCTCGTACGCGCTCCATCGGTCGGGCCGCAAGGCGCCGTTTTGCGTCAGATCACGCCGCCGCGCCCGGAT CCGTCGCATGATTGCGCCCC
Downstream 100 bases:
>100_bases CTGCGCGTCTGCCCTCACGCTGAAGCACTGCCGCGCCCGCCGCGGCGACCGGGCTCCGCCCTTGCCGAACCCTCCCGCCG CCTCTACCTGTGCGAAGCCC
Product: bifunctional isocitrate dehydrogenase kinase/phosphatase protein
Products: NA
Alternate protein names: IDH kinase/phosphatase; IDHK/P
Number of amino acids: Translated: 605; Mature: 604
Protein sequence:
>605_residues MTATRHPFASDIDAATRIAEPDFDLLDALVRTDDPDDQAHTLARVVLAAFDNYYAVSRRIPALAQAAFEARDWAATVRLS KIRLGLYTACIDQLVPLLKAGLPELANDEQLWARAEAELLAAIAERYEADFAFAFWQSLRRKLVSDEWRPVSYDTGPAAR PKATSAAILKTIATTLPIRPAVIRDILDGAGLRGPWRDRDGDAALAAAAIEAALEPLGPRAGETAKIEIAESGFFRNRGA CLVGRVRLRDRGDMPMRNLPLLIALLNEDDGLVVDAVLCDADELQYAFSSTLANYHATNPHYHELARLLHELMPKRPLGT QYSCIGFHHLGKVAVMTEILAEHRRSKEKLDTAPGFKGTVAIAFTMPSSAYVLKIIRDHPTDDYKFDYFDGLDAVLRKYN LVHEIDRAGSMLDNIIYSNVKLERTMFAPDLLDELLESGIDTVTLERGALVFRHLIVQIKLTPLPLYLTTASAADARAAV INLGDCIKNNAAADIFNKDLDGRNYGVSRIRKVYLFDYDAVEPLTDVRVRGDDAPPGPEFEDGVVFRPADMLGGLRIDDP ALRRAFRDAHPELMQPEYWQGMQRALRAGKVPRVMNYPAARRLRR
Sequences:
>Translated_605_residues MTATRHPFASDIDAATRIAEPDFDLLDALVRTDDPDDQAHTLARVVLAAFDNYYAVSRRIPALAQAAFEARDWAATVRLS KIRLGLYTACIDQLVPLLKAGLPELANDEQLWARAEAELLAAIAERYEADFAFAFWQSLRRKLVSDEWRPVSYDTGPAAR PKATSAAILKTIATTLPIRPAVIRDILDGAGLRGPWRDRDGDAALAAAAIEAALEPLGPRAGETAKIEIAESGFFRNRGA CLVGRVRLRDRGDMPMRNLPLLIALLNEDDGLVVDAVLCDADELQYAFSSTLANYHATNPHYHELARLLHELMPKRPLGT QYSCIGFHHLGKVAVMTEILAEHRRSKEKLDTAPGFKGTVAIAFTMPSSAYVLKIIRDHPTDDYKFDYFDGLDAVLRKYN LVHEIDRAGSMLDNIIYSNVKLERTMFAPDLLDELLESGIDTVTLERGALVFRHLIVQIKLTPLPLYLTTASAADARAAV INLGDCIKNNAAADIFNKDLDGRNYGVSRIRKVYLFDYDAVEPLTDVRVRGDDAPPGPEFEDGVVFRPADMLGGLRIDDP ALRRAFRDAHPELMQPEYWQGMQRALRAGKVPRVMNYPAARRLRR >Mature_604_residues TATRHPFASDIDAATRIAEPDFDLLDALVRTDDPDDQAHTLARVVLAAFDNYYAVSRRIPALAQAAFEARDWAATVRLSK IRLGLYTACIDQLVPLLKAGLPELANDEQLWARAEAELLAAIAERYEADFAFAFWQSLRRKLVSDEWRPVSYDTGPAARP KATSAAILKTIATTLPIRPAVIRDILDGAGLRGPWRDRDGDAALAAAAIEAALEPLGPRAGETAKIEIAESGFFRNRGAC LVGRVRLRDRGDMPMRNLPLLIALLNEDDGLVVDAVLCDADELQYAFSSTLANYHATNPHYHELARLLHELMPKRPLGTQ YSCIGFHHLGKVAVMTEILAEHRRSKEKLDTAPGFKGTVAIAFTMPSSAYVLKIIRDHPTDDYKFDYFDGLDAVLRKYNL VHEIDRAGSMLDNIIYSNVKLERTMFAPDLLDELLESGIDTVTLERGALVFRHLIVQIKLTPLPLYLTTASAADARAAVI NLGDCIKNNAAADIFNKDLDGRNYGVSRIRKVYLFDYDAVEPLTDVRVRGDDAPPGPEFEDGVVFRPADMLGGLRIDDPA LRRAFRDAHPELMQPEYWQGMQRALRAGKVPRVMNYPAARRLRR
Specific function: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source
COG id: COG4579
COG function: function code T; Isocitrate dehydrogenase kinase/phosphatase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AceK family
Homologues:
Organism=Escherichia coli, GI1790446, Length=579, Percent_Identity=26.5975820379965, Blast_Score=182, Evalue=4e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACEK_RHOP2 (Q2J2X6)
Other databases:
- EMBL: CP000250 - RefSeq: YP_484095.1 - STRING: Q2J2X6 - GeneID: 3909818 - GenomeReviews: CP000250_GR - KEGG: rpb:RPB_0473 - eggNOG: COG4579 - HOGENOM: HBG660857 - OMA: RMTPLNI - ProtClustDB: PRK02946 - BioCyc: RPAL316058:RPB_0473-MONOMER - GO: GO:0005737 - HAMAP: MF_00747 - InterPro: IPR010452 - PIRSF: PIRSF000719 - ProDom: PD043552
Pfam domain/function: PF06315 AceK
EC number: =2.7.11.5
Molecular weight: Translated: 67294; Mature: 67162
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: ACT_SITE 413-413 BINDING 374-374
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATRHPFASDIDAATRIAEPDFDLLDALVRTDDPDDQAHTLARVVLAAFDNYYAVSRRI CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PALAQAAFEARDWAATVRLSKIRLGLYTACIDQLVPLLKAGLPELANDEQLWARAEAELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH AAIAERYEADFAFAFWQSLRRKLVSDEWRPVSYDTGPAARPKATSAAILKTIATTLPIRP HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCH AVIRDILDGAGLRGPWRDRDGDAALAAAAIEAALEPLGPRAGETAKIEIAESGFFRNRGA HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC CLVGRVRLRDRGDMPMRNLPLLIALLNEDDGLVVDAVLCDADELQYAFSSTLANYHATNP EEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCC HYHELARLLHELMPKRPLGTQYSCIGFHHLGKVAVMTEILAEHRRSKEKLDTAPGFKGTV CHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE AIAFTMPSSAYVLKIIRDHPTDDYKFDYFDGLDAVLRKYNLVHEIDRAGSMLDNIIYSNV EEEEECCCCCEEHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KLERTMFAPDLLDELLESGIDTVTLERGALVFRHLIVQIKLTPLPLYLTTASAADARAAV EEHHHHCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHEEECCCEEEEEECCCCCCHHHE INLGDCIKNNAAADIFNKDLDGRNYGVSRIRKVYLFDYDAVEPLTDVRVRGDDAPPGPEF EEHHHHHCCCCHHHHHHCCCCCCCCCHHHHHEEEEECCCCCCCCHHCEEECCCCCCCCCC EDGVVFRPADMLGGLRIDDPALRRAFRDAHPELMQPEYWQGMQRALRAGKVPRVMNYPAA CCCEEECCHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCHH RRLRR HHHCC >Mature Secondary Structure TATRHPFASDIDAATRIAEPDFDLLDALVRTDDPDDQAHTLARVVLAAFDNYYAVSRRI CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PALAQAAFEARDWAATVRLSKIRLGLYTACIDQLVPLLKAGLPELANDEQLWARAEAELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH AAIAERYEADFAFAFWQSLRRKLVSDEWRPVSYDTGPAARPKATSAAILKTIATTLPIRP HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCH AVIRDILDGAGLRGPWRDRDGDAALAAAAIEAALEPLGPRAGETAKIEIAESGFFRNRGA HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC CLVGRVRLRDRGDMPMRNLPLLIALLNEDDGLVVDAVLCDADELQYAFSSTLANYHATNP EEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCC HYHELARLLHELMPKRPLGTQYSCIGFHHLGKVAVMTEILAEHRRSKEKLDTAPGFKGTV CHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE AIAFTMPSSAYVLKIIRDHPTDDYKFDYFDGLDAVLRKYNLVHEIDRAGSMLDNIIYSNV EEEEECCCCCEEHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KLERTMFAPDLLDELLESGIDTVTLERGALVFRHLIVQIKLTPLPLYLTTASAADARAAV EEHHHHCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHEEECCCEEEEEECCCCCCHHHE INLGDCIKNNAAADIFNKDLDGRNYGVSRIRKVYLFDYDAVEPLTDVRVRGDDAPPGPEF EEHHHHHCCCCHHHHHHCCCCCCCCCHHHHHEEEEECCCCCCCCHHCEEECCCCCCCCCC EDGVVFRPADMLGGLRIDDPALRRAFRDAHPELMQPEYWQGMQRALRAGKVPRVMNYPAA CCCEEECCHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCHH RRLRR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA