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The map label for this gene is yggV [C]

Identifier: 86747550

GI number: 86747550

Start: 467300

End: 467932

Strand: Reverse

Name: yggV [C]

Synonym: RPB_0424

Alternate gene names: 86747550

Gene position: 467932-467300 (Counterclockwise)

Preceding gene: 86747551

Following gene: 86747549

Centisome position: 8.78

GC content: 70.62

Gene sequence:

>633_bases
ATGCATCGACGAATCAGCGGCCAGCTCGTGATCGCGACCCACAATCCCGGCAAGCTCGCCGAGATGCGGGAACTGCTGGC
CCCCTACGGGATCGCCGCGGTGTCGGCCGGCGAACTGGGGCTCGGCGAACCGGACGAAACCGGCGACAGTTTTCGCGCCA
ACGCCCGCATCAAGGCCGAGGCCGCCGCGCAGGCCGCGCAACTCCCTGCCTTTGCAGACGATTCGGGACTTGCCGTCGAT
GCGCTCGACGGCGCCCCTGGGATCTTGTCGGCGCGCTGGGCCGGCGAGGGCAAGGATTTCAACGCCGCGATGGCCCGCAT
CGAACGGCTGCTGCAGGAGCGCGGTGCCACGACGCCGGATCGGCGCGGCGCGCATTTCGTCTCGGCGCTGTGCGTCGCCT
GGCCGGACGGCCATGTCGAGGAGGTCGAGGCGCGGGCGGACGGCACGCTGGTCTGGCCGCCGCGCGGTAGTGCCGGCTTC
GGCTACGACCCGATCTTTCTGCCGGAGGGCCATGACCGCACCTTCGGCGAAATGACCAGCCTCGAGAAGCACGGCCTGCC
GCCGCTCGGGCTCGGCCTGTCGCATCGCGCCCGCGCCTTCGTCGAACTGGCGGAGATCTGCCTTGGGCGCTGA

Upstream 100 bases:

>100_bases
GAAGGGCGTGGCGCGGCTGGTCGATCTGCAGAAAATGGCGGTGGCGTGAGTCATTCTTGCCACCCATTCGCGGCCGCTCC
TGAGCTACGCTAGCGCCGCC

Downstream 100 bases:

>100_bases
ATCCGATCGCGCCTTCGGCGTCCAAGCCTTTGGTGTCTACGTGCACTGGCCCTTCTGCCTGTCGAAGTGCCCGTATTGCG
ACTTCAACAGCCATGTCCGG

Product: putative deoxyribonucleotide triphosphate pyrophosphatase

Products: NA

Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase [H]

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MHRRISGQLVIATHNPGKLAEMRELLAPYGIAAVSAGELGLGEPDETGDSFRANARIKAEAAAQAAQLPAFADDSGLAVD
ALDGAPGILSARWAGEGKDFNAAMARIERLLQERGATTPDRRGAHFVSALCVAWPDGHVEEVEARADGTLVWPPRGSAGF
GYDPIFLPEGHDRTFGEMTSLEKHGLPPLGLGLSHRARAFVELAEICLGR

Sequences:

>Translated_210_residues
MHRRISGQLVIATHNPGKLAEMRELLAPYGIAAVSAGELGLGEPDETGDSFRANARIKAEAAAQAAQLPAFADDSGLAVD
ALDGAPGILSARWAGEGKDFNAAMARIERLLQERGATTPDRRGAHFVSALCVAWPDGHVEEVEARADGTLVWPPRGSAGF
GYDPIFLPEGHDRTFGEMTSLEKHGLPPLGLGLSHRARAFVELAEICLGR
>Mature_210_residues
MHRRISGQLVIATHNPGKLAEMRELLAPYGIAAVSAGELGLGEPDETGDSFRANARIKAEAAAQAAQLPAFADDSGLAVD
ALDGAPGILSARWAGEGKDFNAAMARIERLLQERGATTPDRRGAHFVSALCVAWPDGHVEEVEARADGTLVWPPRGSAGF
GYDPIFLPEGHDRTFGEMTSLEKHGLPPLGLGLSHRARAFVELAEICLGR

Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions [H]

COG id: COG0127

COG function: function code F; Xanthosine triphosphate pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAM1 NTPase family [H]

Homologues:

Organism=Homo sapiens, GI15626999, Length=205, Percent_Identity=29.7560975609756, Blast_Score=71, Evalue=6e-13,
Organism=Escherichia coli, GI1789324, Length=198, Percent_Identity=38.3838383838384, Blast_Score=116, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002637
- InterPro:   IPR020922 [H]

Pfam domain/function: PF01725 Ham1p_like [H]

EC number: =3.6.1.15 [H]

Molecular weight: Translated: 22254; Mature: 22254

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRRISGQLVIATHNPGKLAEMRELLAPYGIAAVSAGELGLGEPDETGDSFRANARIKAE
CCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEECCCEEEHH
AAAQAAQLPAFADDSGLAVDALDGAPGILSARWAGEGKDFNAAMARIERLLQERGATTPD
HHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
RRGAHFVSALCVAWPDGHVEEVEARADGTLVWPPRGSAGFGYDPIFLPEGHDRTFGEMTS
CCHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCEECCCCCCCCHHHHHH
LEKHGLPPLGLGLSHRARAFVELAEICLGR
HHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHRRISGQLVIATHNPGKLAEMRELLAPYGIAAVSAGELGLGEPDETGDSFRANARIKAE
CCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEECCCEEEHH
AAAQAAQLPAFADDSGLAVDALDGAPGILSARWAGEGKDFNAAMARIERLLQERGATTPD
HHHHHHHCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
RRGAHFVSALCVAWPDGHVEEVEARADGTLVWPPRGSAGFGYDPIFLPEGHDRTFGEMTS
CCHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCEECCCCCCCCHHHHHH
LEKHGLPPLGLGLSHRARAFVELAEICLGR
HHHHCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA