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The map label for this gene is 86747416

Identifier: 86747416

GI number: 86747416

Start: 327784

End: 328617

Strand: Reverse

Name: 86747416

Synonym: RPB_0290

Alternate gene names: NA

Gene position: 328617-327784 (Counterclockwise)

Preceding gene: 162138525

Following gene: 86747415

Centisome position: 6.16

GC content: 66.31

Gene sequence:

>834_bases
ATGGGCCGCCTTTTCGTTTTAAGGCGCTCCCGAACGACGGTGGAAGCCGTCGTCACCTGCTCCCATGCAAAGGCGATGAT
GATCGGTGTAGATGGCTTTTCGCGATGGTCCGGCGCCCTCGGTCTGTGCGCGCTGATCGCGATGGTTCGTCCCAGCGCCG
CCGATCCGCGCGCGGTGGTGGAACTGTTCACGTCGCAGGGCTGCTCGTCGTGCCCGCCGGCCGACCGGATCATCGGCGAG
CTCGCCCGCGATCCGTCGATCATCGCGCTGAGTATGCCGATCGATTACTGGGACTATCTCGGCTGGAAGGACACGCTGGC
GGATTCCCGCTTCAGCGCCCGGCAGAAAGCCTATTCGCAGATGCGCGGCGATCGCGACGTGTACACGCCGCAGGTCATCG
TCAACGGCCAGACGCATCTGGTCGGCAGCAACCGCGTCGGCATCGACGGGGCGATCAAGAGCACCGATCAGATCCCCGGC
ACGATGACGGTGCCGGTGCGGATGGCGGTCAATGGCAAGGAGATCAAGGTTTCGGTCGCGGCGGCGCCCCCCGGGGAGAG
AGTCGCGCAGGGCGAGGTCTGGATCTGTTCGGTCTCGAAGGCGGTGCCGATCGCGATTGCACGCGGCGAGAACCGCGGCC
GCGAGGTCGTGTATCACAACGTCGTCCGCAACCTGCTCAAGGTCGGCGACTGGAACGGCGCCGCCGGCAGTTGGTCGGTG
CCGCTGGAAAACATCGCCCATGACGGCATCGATGCCGCCGCGGTCTATGTCCAGGACGGCAACCGCGACAGGCCGGGCGC
GATGCTCGGCGCGGCCTTCACGTCGCTGCACTGA

Upstream 100 bases:

>100_bases
TCAGGAAACTCGCAGCCTGAGCGGGGCACGCAGGCCACATCAGTGGCCAAAAAGTCTCACTGCGAAGTGAGTGGCAGGTG
AACGGAAGGCGGCCTATGCA

Downstream 100 bases:

>100_bases
GGAGTGCAGTTCCGATCGATCGGTCGGGTGAGCGGAGGCCCAAAAACAAAAAAGGCCAACTCACGTTGGCCCAGGCTGGG
GGATTGGTTGCTGCGTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MGRLFVLRRSRTTVEAVVTCSHAKAMMIGVDGFSRWSGALGLCALIAMVRPSAADPRAVVELFTSQGCSSCPPADRIIGE
LARDPSIIALSMPIDYWDYLGWKDTLADSRFSARQKAYSQMRGDRDVYTPQVIVNGQTHLVGSNRVGIDGAIKSTDQIPG
TMTVPVRMAVNGKEIKVSVAAAPPGERVAQGEVWICSVSKAVPIAIARGENRGREVVYHNVVRNLLKVGDWNGAAGSWSV
PLENIAHDGIDAAAVYVQDGNRDRPGAMLGAAFTSLH

Sequences:

>Translated_277_residues
MGRLFVLRRSRTTVEAVVTCSHAKAMMIGVDGFSRWSGALGLCALIAMVRPSAADPRAVVELFTSQGCSSCPPADRIIGE
LARDPSIIALSMPIDYWDYLGWKDTLADSRFSARQKAYSQMRGDRDVYTPQVIVNGQTHLVGSNRVGIDGAIKSTDQIPG
TMTVPVRMAVNGKEIKVSVAAAPPGERVAQGEVWICSVSKAVPIAIARGENRGREVVYHNVVRNLLKVGDWNGAAGSWSV
PLENIAHDGIDAAAVYVQDGNRDRPGAMLGAAFTSLH
>Mature_276_residues
GRLFVLRRSRTTVEAVVTCSHAKAMMIGVDGFSRWSGALGLCALIAMVRPSAADPRAVVELFTSQGCSSCPPADRIIGEL
ARDPSIIALSMPIDYWDYLGWKDTLADSRFSARQKAYSQMRGDRDVYTPQVIVNGQTHLVGSNRVGIDGAIKSTDQIPGT
MTVPVRMAVNGKEIKVSVAAAPPGERVAQGEVWICSVSKAVPIAIARGENRGREVVYHNVVRNLLKVGDWNGAAGSWSVP
LENIAHDGIDAAAVYVQDGNRDRPGAMLGAAFTSLH

Specific function: Unknown

COG id: COG5429

COG function: function code S; Uncharacterized secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29702; Mature: 29571

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLFVLRRSRTTVEAVVTCSHAKAMMIGVDGFSRWSGALGLCALIAMVRPSAADPRAVV
CCCEEEEECCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
ELFTSQGCSSCPPADRIIGELARDPSIIALSMPIDYWDYLGWKDTLADSRFSARQKAYSQ
HHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHCCCHHHHHHHHHHH
MRGDRDVYTPQVIVNGQTHLVGSNRVGIDGAIKSTDQIPGTMTVPVRMAVNGKEIKVSVA
HCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEE
AAPPGERVAQGEVWICSVSKAVPIAIARGENRGREVVYHNVVRNLLKVGDWNGAAGSWSV
ECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PLENIAHDGIDAAAVYVQDGNRDRPGAMLGAAFTSLH
CHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
GRLFVLRRSRTTVEAVVTCSHAKAMMIGVDGFSRWSGALGLCALIAMVRPSAADPRAVV
CCEEEEECCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
ELFTSQGCSSCPPADRIIGELARDPSIIALSMPIDYWDYLGWKDTLADSRFSARQKAYSQ
HHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHCCCHHHHHHHHHHH
MRGDRDVYTPQVIVNGQTHLVGSNRVGIDGAIKSTDQIPGTMTVPVRMAVNGKEIKVSVA
HCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEE
AAPPGERVAQGEVWICSVSKAVPIAIARGENRGREVVYHNVVRNLLKVGDWNGAAGSWSV
ECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PLENIAHDGIDAAAVYVQDGNRDRPGAMLGAAFTSLH
CHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA