Definition | Rhodopseudomonas palustris HaA2, complete genome. |
---|---|
Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is cpo [H]
Identifier: 86747320
GI number: 86747320
Start: 218930
End: 219772
Strand: Reverse
Name: cpo [H]
Synonym: RPB_0194
Alternate gene names: 86747320
Gene position: 219772-218930 (Counterclockwise)
Preceding gene: 86747321
Following gene: 86747318
Centisome position: 4.12
GC content: 63.23
Gene sequence:
>843_bases ATGAGCAGCGGATTCGTCACGATCAAGGACGGCGTCGAGATCTTCTACAAGGACTGGGGCCCCCGGGAGGCCCAGCCGAT CGTGTTTCACCACGGCTGGCCACTGTCGTCCGACGACTGGGATGCGCAGATGCTGTTCTTTCTGTCGCAAGGTTACCGCG TCGTCGCCCATGACCGGCGTGGCCACGGACGCTCGTCGCAGGTCGATGTCGGCCACGACATGGATCACTATGCGGCCGAC GCTTTCGTTGTCATGGAACATCTCGATCTCAAGAACGCCGTCCATATCGGCCATTCGACCGGCGGCGGCGAAGTGGCGCG GTATGTCGCCAAATTCGGCCAGCCCAGCGGCCGGGTCGCGAAAGCCGTCCTCGTCAGCGCCGTGCCGCCGCTGATGCTGA AGACCGAGAACAACCCGGGCGGCCTGCCGATCGAAGTCTTCGACGGCTTCCGCAAGGCGCTCGCCGACAACCGCGCGCAA TTTTATCTCGATGTCGCCGGCGGCCCGTTCTACGGCTACAATCGGGCGGGCGCTCAGTCGTCGCCCGGCGTGGTCAATAA TTGGTGGCGTCAGGGCATGGTGGGCAGCGCGAAGGCGCACTACGACGGCATCAAAGCTTTCTCCGAGACCGACCAGACCG ACGACCTCAAGGCGATCACGGTCCCGACCCTGGTGCTCCACGGCGAGGACGATCAGATCGTCCCGATCGACGACGCGGGG CGGCTTTCGGTCAAGCTGCTCAAGAACGGCAAGCTGAAAACCTATCCGGGCTATCCGCACGGCATGCTGACCACGCACCC CGACGTGCTCAATGCCGACCTGCTCGCTTTCATTAAATCGTAA
Upstream 100 bases:
>100_bases GCGCCGGCGATCCGGGCGACCCGCCGGCATTGCCAGAGGCGCAGTCCTCCCGGTCGCGCAACCGACCCACCTCCCCCGAA CATCACAAGGAGACTACCCA
Downstream 100 bases:
>100_bases CGCAGGCAAGTTTCGAAGTGGCGGAGCCCTCGCCCCGCCACTTCTCTTGAATGAGGCATACGCGACGCTCGTGATCCTGC AATTGTTGCTTCGGTCAAGG
Product: Alpha/beta hydrolase
Products: NA
Alternate protein names: Chloride peroxidase; Chloroperoxidase P; CPO-P [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSSGFVTIKDGVEIFYKDWGPREAQPIVFHHGWPLSSDDWDAQMLFFLSQGYRVVAHDRRGHGRSSQVDVGHDMDHYAAD AFVVMEHLDLKNAVHIGHSTGGGEVARYVAKFGQPSGRVAKAVLVSAVPPLMLKTENNPGGLPIEVFDGFRKALADNRAQ FYLDVAGGPFYGYNRAGAQSSPGVVNNWWRQGMVGSAKAHYDGIKAFSETDQTDDLKAITVPTLVLHGEDDQIVPIDDAG RLSVKLLKNGKLKTYPGYPHGMLTTHPDVLNADLLAFIKS
Sequences:
>Translated_280_residues MSSGFVTIKDGVEIFYKDWGPREAQPIVFHHGWPLSSDDWDAQMLFFLSQGYRVVAHDRRGHGRSSQVDVGHDMDHYAAD AFVVMEHLDLKNAVHIGHSTGGGEVARYVAKFGQPSGRVAKAVLVSAVPPLMLKTENNPGGLPIEVFDGFRKALADNRAQ FYLDVAGGPFYGYNRAGAQSSPGVVNNWWRQGMVGSAKAHYDGIKAFSETDQTDDLKAITVPTLVLHGEDDQIVPIDDAG RLSVKLLKNGKLKTYPGYPHGMLTTHPDVLNADLLAFIKS >Mature_279_residues SSGFVTIKDGVEIFYKDWGPREAQPIVFHHGWPLSSDDWDAQMLFFLSQGYRVVAHDRRGHGRSSQVDVGHDMDHYAADA FVVMEHLDLKNAVHIGHSTGGGEVARYVAKFGQPSGRVAKAVLVSAVPPLMLKTENNPGGLPIEVFDGFRKALADNRAQF YLDVAGGPFYGYNRAGAQSSPGVVNNWWRQGMVGSAKAHYDGIKAFSETDQTDDLKAITVPTLVLHGEDDQIVPIDDAGR LSVKLLKNGKLKTYPGYPHGMLTTHPDVLNADLLAFIKS
Specific function: Chlorinates and brominates suitable organic compounds. Involved in the biosynthesis of the antibiotic pyrrolnitrin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial non-heme bromo- and chloro- peroxidases family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =1.11.1.10 [H]
Molecular weight: Translated: 30644; Mature: 30513
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGFVTIKDGVEIFYKDWGPREAQPIVFHHGWPLSSDDWDAQMLFFLSQGYRVVAHDRR CCCCCEEEECCEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHEEEHHCCCEEEEECCC GHGRSSQVDVGHDMDHYAADAFVVMEHLDLKNAVHIGHSTGGGEVARYVAKFGQPSGRVA CCCCCCCEECCCCCHHHHHHHHHEEHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHH KAVLVSAVPPLMLKTENNPGGLPIEVFDGFRKALADNRAQFYLDVAGGPFYGYNRAGAQS HHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC SPGVVNNWWRQGMVGSAKAHYDGIKAFSETDQTDDLKAITVPTLVLHGEDDQIVPIDDAG CCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCEEEECCCC RLSVKLLKNGKLKTYPGYPHGMLTTHPDVLNADLLAFIKS CEEEEEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SSGFVTIKDGVEIFYKDWGPREAQPIVFHHGWPLSSDDWDAQMLFFLSQGYRVVAHDRR CCCCEEEECCEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHEEEHHCCCEEEEECCC GHGRSSQVDVGHDMDHYAADAFVVMEHLDLKNAVHIGHSTGGGEVARYVAKFGQPSGRVA CCCCCCCEECCCCCHHHHHHHHHEEHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHH KAVLVSAVPPLMLKTENNPGGLPIEVFDGFRKALADNRAQFYLDVAGGPFYGYNRAGAQS HHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC SPGVVNNWWRQGMVGSAKAHYDGIKAFSETDQTDDLKAITVPTLVLHGEDDQIVPIDDAG CCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCEEEECCCC RLSVKLLKNGKLKTYPGYPHGMLTTHPDVLNADLLAFIKS CEEEEEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8344520; 7632719 [H]