Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86609182
Identifier: 86609182
GI number: 86609182
Start: 1804360
End: 1804599
Strand: Reverse
Name: 86609182
Synonym: CYB_1723
Alternate gene names: NA
Gene position: 1804599-1804360 (Counterclockwise)
Preceding gene: 86609184
Following gene: 86609181
Centisome position: 59.23
GC content: 43.33
Gene sequence:
>240_bases GTGAACTGGGAAGACTATATTCATTCGGATCCCGATATTCTCCTGGGTAAGCCAGTTTTCAGAGGAAGTCGCCTATCGGT GGAATTTATTTTGGGGCTATTTTCGGCAGGCTGGACGGAAAAGCAGATTTTGGAAAACTACCCTACGCTGACTCCAGAAG CACTTAGGGCTATGTTTAGCTATATCCAAGAATGTATGCGTGAAATGAACTTCTACAGTTTTTCAGATAAAGTCAGCTAG
Upstream 100 bases:
>100_bases CTCGATCAAACTCGGCTTATCTTTCCAAGCAAGGGGGATGATGGACAAGGGAGATCTCCGGCGATACCATCGATCATGGT AGCTCTTAGGGCCCTAAGCC
Downstream 100 bases:
>100_bases AAATCGCAGGAGCCCCGCACTGTACCCGTAGGGTCACTGCCGGGAGGAATGCGCTTTGATGAAGTACAATGAACTTATGA GCCAAGCCCTGACCATATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MNWEDYIHSDPDILLGKPVFRGSRLSVEFILGLFSAGWTEKQILENYPTLTPEALRAMFSYIQECMREMNFYSFSDKVS
Sequences:
>Translated_79_residues MNWEDYIHSDPDILLGKPVFRGSRLSVEFILGLFSAGWTEKQILENYPTLTPEALRAMFSYIQECMREMNFYSFSDKVS >Mature_79_residues MNWEDYIHSDPDILLGKPVFRGSRLSVEFILGLFSAGWTEKQILENYPTLTPEALRAMFSYIQECMREMNFYSFSDKVS
Specific function: Unknown
COG id: COG2442
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9262; Mature: 9262
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWEDYIHSDPDILLGKPVFRGSRLSVEFILGLFSAGWTEKQILENYPTLTPEALRAMFS CCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHH YIQECMREMNFYSFSDKVS HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNWEDYIHSDPDILLGKPVFRGSRLSVEFILGLFSAGWTEKQILENYPTLTPEALRAMFS CCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHH YIQECMREMNFYSFSDKVS HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA