The gene/protein map for NC_007776 is currently unavailable.
Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

Click here to switch to the map view.

The map label for this gene is 86609135

Identifier: 86609135

GI number: 86609135

Start: 1751647

End: 1752858

Strand: Reverse

Name: 86609135

Synonym: CYB_1675

Alternate gene names: NA

Gene position: 1752858-1751647 (Counterclockwise)

Preceding gene: 86609136

Following gene: 86609134

Centisome position: 57.53

GC content: 60.97

Gene sequence:

>1212_bases
ATGTCCAAAACCAAGCTGAGCGCCTGGGTCATGGGCTGGGGGTTAGCCTGCACTGCTGCTCTCTTTTTGCCCAGCGTGGC
TGCTCAAGCTCAGGTGACCCTCGGTGTGCAGCCGGTGCGGGTGGTGCAAGGGATCCCTTTGTACCAGAAGGAGGTTTGGG
TTGGAGACAATCGGATCCCAGTTTCCATCGTGGTGGTTTCTCTCGCAGCCGGCCAACTGCGGCCCATCTGGGCTGCACGC
GCGGGGCTGGTGGGTTTGGGGGAGCTGTCTTCCTTTGGCCCTGAACAGGGGGCAGTGGCCGCCATTAACGGTGGGTTTTT
CAACCGCAACACCCGTCAGCCGCTGGGGGCGATTCGTCGGGATGGCCGCTGGATCTCCAGCCCCATTTTGGGTCGTGGGG
TCATCGCCTGGTCGGATGGGACGGCAGGGCAAGAAGGGGGATCCGTGCGCTTTGCCCGTTTGCGGATGCAAGCAGAGCTG
CGCAATGACATTGGGGATCAAATCCCAGTGGTGGGCATCAATACAGGCTATATCCTGCCCGGCATCTCCCAGTTCACCCC
CGACTGGGGATCCACCTACACCACCCAAACGGACGACGAAATGCTCGTGATGGTGCGGCAGGATCAGGTGCAAGAAATTC
TGGTGGCGGGCCTGGCCGGCAGTTTGACGGTACAGATTCCCAGCGAGGGGTATGTATTGGCAGGGCGGGGGCTAGAAGGT
GCCCTAGAAGCCCGCAAGCTGGTTCCCGGGGATCGCCTCAGCTTTTATCTGCGCTTGGATCCGCCTGAGCTGGAGGTCTA
TCCCCACATCCTAGGGGCAGGGCCGCTCTTGCTCTTGGATGGACAGGTGGTTTTGGATGCCCGATTGGAGGGATTTCAGC
CTCTCTTTCGCAGGCAGCGAGCCGCCCGCAGTGCCATCGGCCAACTGGACAGCGGACATTTGCTGCTGGTGACCGCCGGC
AATGCCCAGGAAAATCAAGGGCTCACCCTGCTGGAGATGGCACAGTTGATGCAGCAATTGGGCTGTCGCCATGCCTTGAA
CTTGGATGGGGGCAATGCTTCCACCTTGGTGCTGGGGGGAGAGGCCGTCAATTTGGAACACCGACACCCAGAAGCCAGCC
CACCCAACAGTGAGACGGATCCCAGTCCCTCCCGGCGGCGTACACCCCGAGTTCACAATGGCCTAGGGTTTTTCCCAAGC
CCAAGTCGGTGA

Upstream 100 bases:

>100_bases
TTTCCAGGGATCCTGTTGTCGCTCATTGTGATGGGAACCTTTGCCGCAGGGGGATAATCATCTCCCAATGACAATGGTGA
AGCCCTAAAGACGTGAAGAC

Downstream 100 bases:

>100_bases
CAGAAAACTTTTGTGCCGGCGGGATAGAGTCTTTTCCCTTTGATCCAGGGATCGAGGGTGGGATCCCCGAACTTTCTGGC
TGATTGGAGGAGGGGGCAGG

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSKTKLSAWVMGWGLACTAALFLPSVAAQAQVTLGVQPVRVVQGIPLYQKEVWVGDNRIPVSIVVVSLAAGQLRPIWAAR
AGLVGLGELSSFGPEQGAVAAINGGFFNRNTRQPLGAIRRDGRWISSPILGRGVIAWSDGTAGQEGGSVRFARLRMQAEL
RNDIGDQIPVVGINTGYILPGISQFTPDWGSTYTTQTDDEMLVMVRQDQVQEILVAGLAGSLTVQIPSEGYVLAGRGLEG
ALEARKLVPGDRLSFYLRLDPPELEVYPHILGAGPLLLLDGQVVLDARLEGFQPLFRRQRAARSAIGQLDSGHLLLVTAG
NAQENQGLTLLEMAQLMQQLGCRHALNLDGGNASTLVLGGEAVNLEHRHPEASPPNSETDPSPSRRRTPRVHNGLGFFPS
PSR

Sequences:

>Translated_403_residues
MSKTKLSAWVMGWGLACTAALFLPSVAAQAQVTLGVQPVRVVQGIPLYQKEVWVGDNRIPVSIVVVSLAAGQLRPIWAAR
AGLVGLGELSSFGPEQGAVAAINGGFFNRNTRQPLGAIRRDGRWISSPILGRGVIAWSDGTAGQEGGSVRFARLRMQAEL
RNDIGDQIPVVGINTGYILPGISQFTPDWGSTYTTQTDDEMLVMVRQDQVQEILVAGLAGSLTVQIPSEGYVLAGRGLEG
ALEARKLVPGDRLSFYLRLDPPELEVYPHILGAGPLLLLDGQVVLDARLEGFQPLFRRQRAARSAIGQLDSGHLLLVTAG
NAQENQGLTLLEMAQLMQQLGCRHALNLDGGNASTLVLGGEAVNLEHRHPEASPPNSETDPSPSRRRTPRVHNGLGFFPS
PSR
>Mature_402_residues
SKTKLSAWVMGWGLACTAALFLPSVAAQAQVTLGVQPVRVVQGIPLYQKEVWVGDNRIPVSIVVVSLAAGQLRPIWAARA
GLVGLGELSSFGPEQGAVAAINGGFFNRNTRQPLGAIRRDGRWISSPILGRGVIAWSDGTAGQEGGSVRFARLRMQAELR
NDIGDQIPVVGINTGYILPGISQFTPDWGSTYTTQTDDEMLVMVRQDQVQEILVAGLAGSLTVQIPSEGYVLAGRGLEGA
LEARKLVPGDRLSFYLRLDPPELEVYPHILGAGPLLLLDGQVVLDARLEGFQPLFRRQRAARSAIGQLDSGHLLLVTAGN
AQENQGLTLLEMAQLMQQLGCRHALNLDGGNASTLVLGGEAVNLEHRHPEASPPNSETDPSPSRRRTPRVHNGLGFFPSP
SR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43200; Mature: 43069

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTKLSAWVMGWGLACTAALFLPSVAAQAQVTLGVQPVRVVQGIPLYQKEVWVGDNRIP
CCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCCEEEEEEECCCCCC
VSIVVVSLAAGQLRPIWAARAGLVGLGELSSFGPEQGAVAAINGGFFNRNTRQPLGAIRR
CEEEEEEHHCCCCCCHHHHHCCCEECCHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHH
DGRWISSPILGRGVIAWSDGTAGQEGGSVRFARLRMQAELRNDIGDQIPVVGINTGYILP
CCEEECCCCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEECCCCCCC
GISQFTPDWGSTYTTQTDDEMLVMVRQDQVQEILVAGLAGSLTVQIPSEGYVLAGRGLEG
CHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCH
ALEARKLVPGDRLSFYLRLDPPELEVYPHILGAGPLLLLDGQVVLDARLEGFQPLFRRQR
HHHHHHCCCCCCEEEEEEECCCCEEEECCEECCCCEEEECCCEEEECHHHHHHHHHHHHH
AARSAIGQLDSGHLLLVTAGNAQENQGLTLLEMAQLMQQLGCRHALNLDGGNASTLVLGG
HHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEECC
EAVNLEHRHPEASPPNSETDPSPSRRRTPRVHNGLGFFPSPSR
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure 
SKTKLSAWVMGWGLACTAALFLPSVAAQAQVTLGVQPVRVVQGIPLYQKEVWVGDNRIP
CCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCCEEEEEEECCCCCC
VSIVVVSLAAGQLRPIWAARAGLVGLGELSSFGPEQGAVAAINGGFFNRNTRQPLGAIRR
CEEEEEEHHCCCCCCHHHHHCCCEECCHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHH
DGRWISSPILGRGVIAWSDGTAGQEGGSVRFARLRMQAELRNDIGDQIPVVGINTGYILP
CCEEECCCCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEECCCCCCC
GISQFTPDWGSTYTTQTDDEMLVMVRQDQVQEILVAGLAGSLTVQIPSEGYVLAGRGLEG
CHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCH
ALEARKLVPGDRLSFYLRLDPPELEVYPHILGAGPLLLLDGQVVLDARLEGFQPLFRRQR
HHHHHHCCCCCCEEEEEEECCCCEEEECCEECCCCEEEECCCEEEECHHHHHHHHHHHHH
AARSAIGQLDSGHLLLVTAGNAQENQGLTLLEMAQLMQQLGCRHALNLDGGNASTLVLGG
HHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEECC
EAVNLEHRHPEASPPNSETDPSPSRRRTPRVHNGLGFFPSPSR
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA