Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is rpmG [H]
Identifier: 86609096
GI number: 86609096
Start: 1704136
End: 1704330
Strand: Reverse
Name: rpmG [H]
Synonym: CYB_1634
Alternate gene names: 86609096
Gene position: 1704330-1704136 (Counterclockwise)
Preceding gene: 86609097
Following gene: 86609095
Centisome position: 55.94
GC content: 55.38
Gene sequence:
>195_bases ATGGCCAAAGCAAAGGGTGCCCGCATCATCATTACTCTGGAGTGTACGGAGTGCCGCACCAACGTCAACAAGCGCTCTCC AGGCGTGAACCGCTACACCACCACCAAAAACCGCCGCAACACAACAGCCCGCTTAGAGCTGAAGAAATTCTGCCCCCACT GCAACCGCCACACCGTCCACAAAGAGATTAAGTAG
Upstream 100 bases:
>100_bases AATTGGTGATCGCGCTTATCGAGGTAAACCCCCATCTCCAGCCTCAGGATCTGGGATTGCAGTTTCCTCATTGCCGTTTA CCTTCGTCTTGGGATCCGTC
Downstream 100 bases:
>100_bases TTCAAGCCGTTTCGCCGTTCTCCTGACCTATGGTTTACGCTCGCCGCCGCCTGTCTCCCATCAAGCCGGGAGAACCCATT AGGTACACCGATGTGGAGCT
Product: 50S ribosomal protein L33
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MAKAKGARIIITLECTECRTNVNKRSPGVNRYTTTKNRRNTTARLELKKFCPHCNRHTVHKEIK
Sequences:
>Translated_64_residues MAKAKGARIIITLECTECRTNVNKRSPGVNRYTTTKNRRNTTARLELKKFCPHCNRHTVHKEIK >Mature_63_residues AKAKGARIIITLECTECRTNVNKRSPGVNRYTTTKNRRNTTARLELKKFCPHCNRHTVHKEIK
Specific function: Unknown
COG id: COG0267
COG function: function code J; Ribosomal protein L33
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L33P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001705 - InterPro: IPR018264 - InterPro: IPR011332 [H]
Pfam domain/function: PF00471 Ribosomal_L33 [H]
EC number: NA
Molecular weight: Translated: 7439; Mature: 7308
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: PS00582 RIBOSOMAL_L33
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAKGARIIITLECTECRTNVNKRSPGVNRYTTTKNRRNTTARLELKKFCPHCNRHTVH CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEHHHHCCCCCCCCCC KEIK CCCC >Mature Secondary Structure AKAKGARIIITLECTECRTNVNKRSPGVNRYTTTKNRRNTTARLELKKFCPHCNRHTVH CCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEHHHHCCCCCCCCCC KEIK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA