Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608767
Identifier: 86608767
GI number: 86608767
Start: 1348755
End: 1349453
Strand: Direct
Name: 86608767
Synonym: CYB_1292
Alternate gene names: NA
Gene position: 1348755-1349453 (Clockwise)
Preceding gene: 86608766
Following gene: 86608774
Centisome position: 44.27
GC content: 58.23
Gene sequence:
>699_bases GTGCTGGATCCGGTTTATCTACCCGAGTTGCCCCCCACCCAAGACGAGCTCCCCTACGACGACGGCGAACCTATGGAAAG CTGGCGGCACAGGTGCCAGATGGACTTGCTCATCTCCACTACCCAAACCTGGTTGCAGCAGCGCCCTGATGGCTTTGTCG GTGGCAATATGTTTCTCTACTACAGCTTGGAGCAGACCAGCGGCCGCAATTTCAAAGGGCCGGATTATTTTGTGGTGTTG GGCGTGCCTAAAGGCGAGCGCAAAAGCTGGGTGATTTGGGAGCAGGGCAAAGGGCCGGACGTGGTGATTGAGCTTGTTTT TCCCAGCACTGCCCAGGAGGACAAGACAAGCAAAAAGCAACTTTATGAGCAGATTATCCGGGTGCCGGAGTACTTTTGGT TTGACCCGTTTGATCCAGAAGACTGGGCGGGGTTTCGGCTGAGGGGCGACCGCTATGAGCCGATTAAAGAGGATGCCGAG GGTTGCTTGCCGAGCGAGGTTTTGGGATTGTACCTAGTGAAGTGGGAGGGCAGGTTTCGGGACATCGAGGCCACCTGGAT TCGCTGGGCCACTGCTGCTGGGGAACTGGTACCCACCGAGGCCGAACTGGAGCGGCAAAGGGCTGAGCAGGCCGAACAAC GGGCAGGGCGCCTGGCCCGGAAGCTACGAGAGCTAGGGGTAGATCCAGACGCCCTGTAG
Upstream 100 bases:
>100_bases CATGTGGGGGTATCTGTATCCCGGCACTGACCCTACGGGTACAGTGCGGGGCTTAGCTACCCCCACACCCCCATAAGCTA ACCCGAACCCAATTACTGAG
Downstream 100 bases:
>100_bases ACAGCCAAGTAACTCAAGACAACAGATGGATCCCTAGGAGGCCAACAGCAACACAGGTAGCTTTTGAATAGCAGGCCGTA ATCCCTTGGGAAAGCGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MLDPVYLPELPPTQDELPYDDGEPMESWRHRCQMDLLISTTQTWLQQRPDGFVGGNMFLYYSLEQTSGRNFKGPDYFVVL GVPKGERKSWVIWEQGKGPDVVIELVFPSTAQEDKTSKKQLYEQIIRVPEYFWFDPFDPEDWAGFRLRGDRYEPIKEDAE GCLPSEVLGLYLVKWEGRFRDIEATWIRWATAAGELVPTEAELERQRAEQAEQRAGRLARKLRELGVDPDAL
Sequences:
>Translated_232_residues MLDPVYLPELPPTQDELPYDDGEPMESWRHRCQMDLLISTTQTWLQQRPDGFVGGNMFLYYSLEQTSGRNFKGPDYFVVL GVPKGERKSWVIWEQGKGPDVVIELVFPSTAQEDKTSKKQLYEQIIRVPEYFWFDPFDPEDWAGFRLRGDRYEPIKEDAE GCLPSEVLGLYLVKWEGRFRDIEATWIRWATAAGELVPTEAELERQRAEQAEQRAGRLARKLRELGVDPDAL >Mature_232_residues MLDPVYLPELPPTQDELPYDDGEPMESWRHRCQMDLLISTTQTWLQQRPDGFVGGNMFLYYSLEQTSGRNFKGPDYFVVL GVPKGERKSWVIWEQGKGPDVVIELVFPSTAQEDKTSKKQLYEQIIRVPEYFWFDPFDPEDWAGFRLRGDRYEPIKEDAE GCLPSEVLGLYLVKWEGRFRDIEATWIRWATAAGELVPTEAELERQRAEQAEQRAGRLARKLRELGVDPDAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26977; Mature: 26977
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDPVYLPELPPTQDELPYDDGEPMESWRHRCQMDLLISTTQTWLQQRPDGFVGGNMFLY CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE YSLEQTSGRNFKGPDYFVVLGVPKGERKSWVIWEQGKGPDVVIELVFPSTAQEDKTSKKQ EEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHH LYEQIIRVPEYFWFDPFDPEDWAGFRLRGDRYEPIKEDAEGCLPSEVLGLYLVKWEGRFR HHHHHHHCCHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCHHHHEEEEEEECCCEE DIEATWIRWATAAGELVPTEAELERQRAEQAEQRAGRLARKLRELGVDPDAL CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLDPVYLPELPPTQDELPYDDGEPMESWRHRCQMDLLISTTQTWLQQRPDGFVGGNMFLY CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE YSLEQTSGRNFKGPDYFVVLGVPKGERKSWVIWEQGKGPDVVIELVFPSTAQEDKTSKKQ EEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHH LYEQIIRVPEYFWFDPFDPEDWAGFRLRGDRYEPIKEDAEGCLPSEVLGLYLVKWEGRFR HHHHHHHCCHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCHHHHEEEEEEECCCEE DIEATWIRWATAAGELVPTEAELERQRAEQAEQRAGRLARKLRELGVDPDAL CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA