Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608763
Identifier: 86608763
GI number: 86608763
Start: 1343931
End: 1344449
Strand: Direct
Name: 86608763
Synonym: CYB_1288
Alternate gene names: NA
Gene position: 1343931-1344449 (Clockwise)
Preceding gene: 86608762
Following gene: 86608764
Centisome position: 44.11
GC content: 62.04
Gene sequence:
>519_bases ATGCGGCTCATTGACGAGCAGGGGCGGCTTTTGGGAAAGGTCAGCCTCTTGGATCTGGGAGCTCTGGCAATTGTGGTGGT GGCCATTGTCGCCGTCTTGTTCTTTCCGGGTCGGCAGGCGGGCAGTGTCGTCCAGGTGGGAGGTGGCCCCACGCTGCCGG TGGAAGTGGACATGATTGTGCGCGGGGTCAGCAGCCGCTCTACGGAACCTTTTCAGGCGGGGCAGAAGGCTGACCTGATC ATCCGCAACCAGCCCTACGGCCAGGTGGAGGTGGTGCGAGTGGAAAATGTCAGCCGCACGGTGCCGGTGGTTTTCCCCGA TGGGCGGGTGCAGAACTTGCCCGATCCCGAAGCCTATCGCCTCGATCTGGTGTTTACCTTGCGAGGGCGCGGCCAGCGGA CGGAGAATGGCATCGTCCTGGGCAACAATCGCGTCAAAATCGGTGTTCCCCTAGAGCTAGAGACCTTTGGCTACAACTTG CGCGGCACCGTGATGGACGTGCGGCTGCCGCAATCGTAG
Upstream 100 bases:
>100_bases GCTGGGCAGCAGCGCCCTAGCCTGGATCCCCTAGAGCGGGAAAGCCACTTGGAGAACAAACCTGCCTAGAATCAAGACAG GGTGTGCGAGGAGAGGTGAT
Downstream 100 bases:
>100_bases AGCATGACTCTAGTCAATAATAAGCTCAACTATACTGAAAATAATGTATAACATGTTCAGTACGGATTACTACCAGTTGA TCTTTCTGTTTACTTTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRLIDEQGRLLGKVSLLDLGALAIVVVAIVAVLFFPGRQAGSVVQVGGGPTLPVEVDMIVRGVSSRSTEPFQAGQKADLI IRNQPYGQVEVVRVENVSRTVPVVFPDGRVQNLPDPEAYRLDLVFTLRGRGQRTENGIVLGNNRVKIGVPLELETFGYNL RGTVMDVRLPQS
Sequences:
>Translated_172_residues MRLIDEQGRLLGKVSLLDLGALAIVVVAIVAVLFFPGRQAGSVVQVGGGPTLPVEVDMIVRGVSSRSTEPFQAGQKADLI IRNQPYGQVEVVRVENVSRTVPVVFPDGRVQNLPDPEAYRLDLVFTLRGRGQRTENGIVLGNNRVKIGVPLELETFGYNL RGTVMDVRLPQS >Mature_172_residues MRLIDEQGRLLGKVSLLDLGALAIVVVAIVAVLFFPGRQAGSVVQVGGGPTLPVEVDMIVRGVSSRSTEPFQAGQKADLI IRNQPYGQVEVVRVENVSRTVPVVFPDGRVQNLPDPEAYRLDLVFTLRGRGQRTENGIVLGNNRVKIGVPLELETFGYNL RGTVMDVRLPQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18700; Mature: 18700
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIDEQGRLLGKVSLLDLGALAIVVVAIVAVLFFPGRQAGSVVQVGGGPTLPVEVDMIV CCEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEHHHEE RGVSSRSTEPFQAGQKADLIIRNQPYGQVEVVRVENVSRTVPVVFPDGRVQNLPDPEAYR ECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEE LDLVFTLRGRGQRTENGIVLGNNRVKIGVPLELETFGYNLRGTVMDVRLPQS EEEEEEECCCCCCCCCCEEECCCEEEEEECEEEHHCCCCEEEEEEEEEECCC >Mature Secondary Structure MRLIDEQGRLLGKVSLLDLGALAIVVVAIVAVLFFPGRQAGSVVQVGGGPTLPVEVDMIV CCEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEHHHEE RGVSSRSTEPFQAGQKADLIIRNQPYGQVEVVRVENVSRTVPVVFPDGRVQNLPDPEAYR ECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEE LDLVFTLRGRGQRTENGIVLGNNRVKIGVPLELETFGYNLRGTVMDVRLPQS EEEEEEECCCCCCCCCCEEECCCEEEEEECEEEHHCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA